RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 LEG1Q6P5S2 330 aa10.97□□□□□ -0.65
LSM5-201ENST00000223084 UGT2A3Q6UWM9 527 aa10.97□□□□□ -0.65
LSM5-201ENST00000223084 RASSF6Q6ZTQ3 369 aa10.97□□□□□ -0.65
LSM5-201ENST00000223084 CCDC121Q6ZUS5 278 aa10.97□□□□□ -0.65
LSM5-201ENST00000223084 ASRGL1Q7L266 308 aa10.97□□□□□ -0.65
LSM5-201ENST00000223084 ADCK1Q86TW2 530 aa10.97□□□□□ -0.65
LSM5-201ENST00000223084 JAZF1Q86VZ6 243 aa10.97□□□□□ -0.65
LSM5-201ENST00000223084 HS3ST5Q8IZT8 346 aa10.97□□□□□ -0.65
LSM5-201ENST00000223084 LRRC75A-AS1Q8N1F1 130 aa10.97□□□□□ -0.65
LSM5-201ENST00000223084 PAQR4Q8N4S7 273 aaPredicted RBP10.97□□□□□ -0.65
LSM5-201ENST00000223084 PAPD5Q8NDF8 572 aaKnown RBP10.97□□□□□ -0.65
LSM5-201ENST00000223084 IL17RDQ8NFM7 739 aa10.97□□□□□ -0.65
LSM5-201ENST00000223084 OR4F15Q8NGB8 312 aa10.97□□□□□ -0.65
LSM5-201ENST00000223084 AKR7LQ8NHP1 331 aa10.97□□□□□ -0.65
LSM5-201ENST00000223084 UTP4Q969X6 686 aaKnown RBP10.97□□□□□ -0.65
LSM5-201ENST00000223084 TSSK2Q96PF2 358 aa10.97□□□□□ -0.65
LSM5-201ENST00000223084 NMNAT3Q96T66 252 aa10.97□□□□□ -0.65
LSM5-201ENST00000223084 FEVQ99581 238 aa10.97□□□□□ -0.65
LSM5-201ENST00000223084 CACNG6Q9BXT2 260 aa10.97□□□□□ -0.65
LSM5-201ENST00000223084 DGCR6LQ9BY27 220 aa10.97□□□□□ -0.65
LSM5-201ENST00000223084 NUAK2Q9H093 628 aa10.97□□□□□ -0.65
LSM5-201ENST00000223084 KCNN2Q9H2S1 579 aa10.97□□□□□ -0.65
LSM5-201ENST00000223084 FN3KQ9H479 309 aa10.97□□□□□ -0.65
LSM5-201ENST00000223084 CCNB1IP1Q9NPC3 277 aa10.97□□□□□ -0.65
LSM5-201ENST00000223084 POLE4Q9NR33 117 aa10.97□□□□□ -0.65
LSM5-201ENST00000223084 CA10Q9NS85 328 aa10.97□□□□□ -0.65
LSM5-201ENST00000223084 CBLN4Q9NTU7 201 aa10.97□□□□□ -0.65
LSM5-201ENST00000223084 PDP1Q9P0J1 537 aaPredicted RBP10.97□□□□□ -0.65
LSM5-201ENST00000223084 COA3Q9Y2R0 106 aaPredicted RBP10.97□□□□□ -0.65
LSM5-201ENST00000223084 DCTN6O00399 190 aa10.96□□□□□ -0.65
LSM5-201ENST00000223084 AHCYL1O43865 530 aa10.96□□□□□ -0.65
LSM5-201ENST00000223084 E2F6O75461 281 aa10.96□□□□□ -0.65
LSM5-201ENST00000223084 KHDRBS3O75525 346 aaKnown RBP10.96□□□□□ -0.65
LSM5-201ENST00000223084 TP53P04637 393 aaPredicted RBP10.96□□□□□ -0.65
LSM5-201ENST00000223084 CST2P09228 141 aa10.96□□□□□ -0.65
LSM5-201ENST00000223084 PAX1P15863 534 aa10.96□□□□□ -0.65
LSM5-201ENST00000223084 MSR1P21757 451 aa10.96□□□□□ -0.65
LSM5-201ENST00000223084 PRKACGP22612 351 aa10.96□□□□□ -0.65
LSM5-201ENST00000223084 APEX1P27695 318 aaKnown RBP10.96□□□□□ -0.65
LSM5-201ENST00000223084 NOS3P29474 1203 aa10.96□□□□□ -0.65
LSM5-201ENST00000223084 GUCA1AP43080 201 aaPredicted RBP10.96□□□□□ -0.65
LSM5-201ENST00000223084 CENPAP49450 140 aa10.96□□□□□ -0.65
LSM5-201ENST00000223084 HSF2Q03933 536 aa10.96□□□□□ -0.65
LSM5-201ENST00000223084 SNTB2Q13425 540 aaKnown RBP10.96□□□□□ -0.65
LSM5-201ENST00000223084 CCNIQ14094 377 aa10.96□□□□□ -0.65
LSM5-201ENST00000223084 DAG1Q14118 895 aa10.96□□□□□ -0.65
LSM5-201ENST00000223084 ENDOGQ14249 297 aaKnown RBP10.96□□□□□ -0.65
LSM5-201ENST00000223084 ADIPOQQ15848 244 aa10.96□□□□□ -0.65
LSM5-201ENST00000223084 MST1LQ2TV78 715 aa10.96□□□□□ -0.65
LSM5-201ENST00000223084 PABPC1L2AQ5JQF8 200 aa10.96□□□□□ -0.65
LSM5-201ENST00000223084 FAM27BQ5VT28 67 aa10.96□□□□□ -0.65
LSM5-201ENST00000223084 YTHDF3Q7Z739 585 aaKnown RBP10.96□□□□□ -0.65
LSM5-201ENST00000223084 DPPA2Q7Z7J5 298 aa10.96□□□□□ -0.65
LSM5-201ENST00000223084 TGIF2LYQ8IUE0 185 aa10.96□□□□□ -0.65
LSM5-201ENST00000223084 CPEB3Q8NE35 698 aaKnown RBP10.96□□□□□ -0.65
LSM5-201ENST00000223084 SLC30A7Q8NEW0 376 aa10.96□□□□□ -0.65
LSM5-201ENST00000223084 SDR9C7Q8NEX9 313 aa10.96□□□□□ -0.65
LSM5-201ENST00000223084 NUP37Q8NFH4 326 aa10.96□□□□□ -0.65
LSM5-201ENST00000223084 OR52L1Q8NGH7 329 aa10.96□□□□□ -0.65
LSM5-201ENST00000223084 OR52E2Q8NGJ4 325 aa10.96□□□□□ -0.65
LSM5-201ENST00000223084 ZNF416Q9BWM5 594 aa10.96□□□□□ -0.65
LSM5-201ENST00000223084 TSSK6Q9BXA6 273 aa10.96□□□□□ -0.65
LSM5-201ENST00000223084 MMADHCQ9H3L0 296 aaPredicted RBP10.96□□□□□ -0.65
LSM5-201ENST00000223084 SRA1Q9HD15 236 aaKnown RBP10.96□□□□□ -0.65
LSM5-201ENST00000223084 TBC1D23Q9NUY8 699 aa10.96□□□□□ -0.65
LSM5-201ENST00000223084 ARMC1Q9NVT9 282 aa10.96□□□□□ -0.65
LSM5-201ENST00000223084 IL20Q9NYY1 176 aa10.96□□□□□ -0.65
LSM5-201ENST00000223084 DNAJB9Q9UBS3 223 aa10.96□□□□□ -0.65
LSM5-201ENST00000223084 GDF2Q9UK05 429 aaPredicted RBP10.96□□□□□ -0.65
LSM5-201ENST00000223084 OR6C68A6NDL8 312 aa10.95□□□□□ -0.66
LSM5-201ENST00000223084 FAM171A2A8MVW0 826 aa10.95□□□□□ -0.66
LSM5-201ENST00000223084 BHLHE40O14503 412 aa10.95□□□□□ -0.66
LSM5-201ENST00000223084 GPRIN2O60269 458 aa10.95□□□□□ -0.66
LSM5-201ENST00000223084 TMCC2O75069 709 aa10.95□□□□□ -0.66
LSM5-201ENST00000223084 RENP00797 406 aa10.95□□□□□ -0.66
LSM5-201ENST00000223084 OR4A8P0C604 315 aa10.95□□□□□ -0.66
LSM5-201ENST00000223084 HOXB6P17509 224 aaKnown RBP10.95□□□□□ -0.66
LSM5-201ENST00000223084 NR4A1P22736 598 aa10.95□□□□□ -0.66
LSM5-201ENST00000223084 SERPINF1P36955 418 aa10.95□□□□□ -0.66
LSM5-201ENST00000223084 PSG4Q00888 419 aa10.95□□□□□ -0.66
LSM5-201ENST00000223084 PLP2Q04941 152 aa10.95□□□□□ -0.66
LSM5-201ENST00000223084 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.95□□□□□ -0.66
LSM5-201ENST00000223084 MSMPQ1L6U9 139 aa10.95□□□□□ -0.66
LSM5-201ENST00000223084 SWI5Q1ZZU3 235 aa10.95□□□□□ -0.66
LSM5-201ENST00000223084 SHEQ5VZ18 495 aa10.95□□□□□ -0.66
LSM5-201ENST00000223084 RPL13AP3Q6NVV1 102 aa10.95□□□□□ -0.66
LSM5-201ENST00000223084 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.95□□□□□ -0.66
LSM5-201ENST00000223084 OR6V1Q8N148 313 aa10.95□□□□□ -0.66
LSM5-201ENST00000223084 OR4Q3Q8NH05 313 aa10.95□□□□□ -0.66
LSM5-201ENST00000223084 TRMT61AQ96FX7 289 aaKnown RBP10.95□□□□□ -0.66
LSM5-201ENST00000223084 GRIP2Q9C0E4 1043 aa10.95□□□□□ -0.66
LSM5-201ENST00000223084 OR2H1Q9GZK4 316 aa10.95□□□□□ -0.66
LSM5-201ENST00000223084 WNT5BQ9H1J7 359 aa10.95□□□□□ -0.66
LSM5-201ENST00000223084 OR51B6Q9H340 312 aa10.95□□□□□ -0.66
LSM5-201ENST00000223084 YY1AP1Q9H869 796 aa10.95□□□□□ -0.66
LSM5-201ENST00000223084 NTN4Q9HB63 628 aa10.95□□□□□ -0.66
LSM5-201ENST00000223084 RPRD1BQ9NQG5 326 aaKnown RBP10.95□□□□□ -0.66
LSM5-201ENST00000223084 FBXL3Q9UKT7 428 aa10.95□□□□□ -0.66
LSM5-201ENST00000223084 FZR1Q9UM11 496 aa10.95□□□□□ -0.66
LSM5-201ENST00000223084 B9D1Q9UPM9 204 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms