RNA–Protein interactions for RNA: ENST00000216877.10

PTPRA-201, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-201ENST00000216877 TAC3Q9UHF0 121 aa13.34□□□□□ -0.27
PTPRA-201ENST00000216877 FRMPD3Q5JV73 1810 aa13.34□□□□□ -0.27
PTPRA-201ENST00000216877 TSPAN11A1L157 253 aa13.34□□□□□ -0.27
PTPRA-201ENST00000216877 OR5H15A6NDH6 313 aa13.34□□□□□ -0.27
PTPRA-201ENST00000216877 OR5H1A6NKK0 313 aa13.34□□□□□ -0.27
PTPRA-201ENST00000216877 SEC14L6B5MCN3 397 aa13.34□□□□□ -0.27
PTPRA-201ENST00000216877 TMEM189-UBE2V1I3L0A0 370 aa13.34□□□□□ -0.27
PTPRA-201ENST00000216877 XRCC3O43542 346 aa13.34□□□□□ -0.27
PTPRA-201ENST00000216877 CD160O95971 181 aa13.34□□□□□ -0.27
PTPRA-201ENST00000216877 THBS1P07996 1170 aa13.34□□□□□ -0.27
PTPRA-201ENST00000216877 SQSTM1Q13501 440 aa13.34□□□□□ -0.27
PTPRA-201ENST00000216877 TPRG1Q6ZUI0 275 aa13.34□□□□□ -0.27
PTPRA-201ENST00000216877 OR2L2Q8NH16 312 aa13.34□□□□□ -0.27
PTPRA-201ENST00000216877 BPIFA2Q96DR5 249 aa13.34□□□□□ -0.27
PTPRA-201ENST00000216877 CERS4Q9HA82 394 aa13.34□□□□□ -0.27
PTPRA-201ENST00000216877 IL36AQ9UHA7 158 aa13.34□□□□□ -0.27
PTPRA-201ENST00000216877 TMED7Q9Y3B3 224 aa13.34□□□□□ -0.27
PTPRA-201ENST00000216877 PCYT1BQ9Y5K3 369 aaPredicted RBP13.34□□□□□ -0.27
PTPRA-201ENST00000216877 MAP1BP46821 2468 aaKnown RBP13.33□□□□□ -0.28
PTPRA-201ENST00000216877 TRBV5-4A0A0C4DH59 114 aa13.33□□□□□ -0.28
PTPRA-201ENST00000216877 NUDT19A8MXV4 375 aa13.33□□□□□ -0.28
PTPRA-201ENST00000216877 MAPK8P45983 427 aa13.33□□□□□ -0.28
PTPRA-201ENST00000216877 ACTA2P62736 377 aa13.33□□□□□ -0.28
PTPRA-201ENST00000216877 ACTG2P63267 376 aa13.33□□□□□ -0.28
PTPRA-201ENST00000216877 MIDNQ504T8 468 aa13.33□□□□□ -0.28
PTPRA-201ENST00000216877 NKAIN2Q5VXU1 208 aa13.33□□□□□ -0.28
PTPRA-201ENST00000216877 NXPE4Q6UWF7 544 aa13.33□□□□□ -0.28
PTPRA-201ENST00000216877 DBX2Q6ZNG2 339 aa13.33□□□□□ -0.28
PTPRA-201ENST00000216877 SLC24A5Q71RS6 500 aa13.33□□□□□ -0.28
PTPRA-201ENST00000216877 AMER3Q8N944 861 aa13.33□□□□□ -0.28
PTPRA-201ENST00000216877 OR5AK2Q8NH90 309 aa13.33□□□□□ -0.28
PTPRA-201ENST00000216877 TMEM239Q8WW34 195 aa13.33□□□□□ -0.28
PTPRA-201ENST00000216877 Q96M85 177 aa13.33□□□□□ -0.28
PTPRA-201ENST00000216877 CMKLR1Q99788 373 aa13.33□□□□□ -0.28
PTPRA-201ENST00000216877 MSRAQ9UJ68 235 aa13.33□□□□□ -0.28
PTPRA-201ENST00000216877 ADAP1O75689 374 aa13.33□□□□□ -0.28
PTPRA-201ENST00000216877 TAGLN2P37802 199 aaKnown RBP13.33□□□□□ -0.28
PTPRA-201ENST00000216877 GAS6Q14393 721 aa13.33□□□□□ -0.28
PTPRA-201ENST00000216877 SOHLH1Q5JUK2 328 aa13.33□□□□□ -0.28
PTPRA-201ENST00000216877 TANGO2Q6ICL3 276 aa13.33□□□□□ -0.28
PTPRA-201ENST00000216877 PLPP7Q8NBV4 271 aa13.33□□□□□ -0.28
PTPRA-201ENST00000216877 OR56A3Q8NH54 315 aa13.33□□□□□ -0.28
PTPRA-201ENST00000216877 RRNAD1Q96FB5 475 aaKnown RBP13.33□□□□□ -0.28
PTPRA-201ENST00000216877 NELFAQ9H3P2 528 aa13.33□□□□□ -0.28
PTPRA-201ENST00000216877 PPP1R14DQ9NXH3 145 aa13.33□□□□□ -0.28
PTPRA-201ENST00000216877 IER3IP1Q9Y5U9 82 aa13.33□□□□□ -0.28
PTPRA-201ENST00000216877 DCDC2BA2VCK2 349 aa13.33□□□□□ -0.28
PTPRA-201ENST00000216877 IFITM10A6NMD0 228 aa13.33□□□□□ -0.28
PTPRA-201ENST00000216877 ADAM10O14672 748 aa13.33□□□□□ -0.28
PTPRA-201ENST00000216877 SLC16A5O15375 505 aa13.33□□□□□ -0.28
PTPRA-201ENST00000216877 PLGP00747 810 aaPredicted RBP13.33□□□□□ -0.28
PTPRA-201ENST00000216877 TRGC2P03986 189 aa13.33□□□□□ -0.28
PTPRA-201ENST00000216877 CCKBRP32239 447 aa13.33□□□□□ -0.28
PTPRA-201ENST00000216877 DECR1Q16698 335 aa13.33□□□□□ -0.28
PTPRA-201ENST00000216877 GUK1Q16774 197 aa13.33□□□□□ -0.28
PTPRA-201ENST00000216877 ZNF467Q7Z7K2 595 aaPredicted RBP13.33□□□□□ -0.28
PTPRA-201ENST00000216877 RASGEF1AQ8N9B8 481 aa13.33□□□□□ -0.28
PTPRA-201ENST00000216877 C2orf88Q9BSF0 95 aa13.33□□□□□ -0.28
PTPRA-201ENST00000216877 CMC2Q9NRP2 79 aa13.33□□□□□ -0.28
PTPRA-201ENST00000216877 A0A1W2PS29 197 aa13.32□□□□□ -0.28
PTPRA-201ENST00000216877 A6NNC1 897 aa13.32□□□□□ -0.28
PTPRA-201ENST00000216877 TMPRSS11DO60235 418 aa13.32□□□□□ -0.28
PTPRA-201ENST00000216877 IL9P15248 144 aa13.32□□□□□ -0.28
PTPRA-201ENST00000216877 MC3RP41968 323 aa13.32□□□□□ -0.28
PTPRA-201ENST00000216877 DUSP5Q16690 384 aa13.32□□□□□ -0.28
PTPRA-201ENST00000216877 MST1LQ2TV78 715 aa13.32□□□□□ -0.28
PTPRA-201ENST00000216877 C10orf91Q5T1B1 145 aa13.32□□□□□ -0.28
PTPRA-201ENST00000216877 DMRTA1Q5VZB9 504 aa13.32□□□□□ -0.28
PTPRA-201ENST00000216877 MRGPREQ86SM8 312 aa13.32□□□□□ -0.28
PTPRA-201ENST00000216877 ZNF679Q8IYX0 411 aa13.32□□□□□ -0.28
PTPRA-201ENST00000216877 BHLHE23Q8NDY6 225 aa13.32□□□□□ -0.28
PTPRA-201ENST00000216877 ASB17Q8WXJ9 295 aa13.32□□□□□ -0.28
PTPRA-201ENST00000216877 KISS1RQ969F8 398 aaPredicted RBP13.32□□□□□ -0.28
PTPRA-201ENST00000216877 WBP2Q969T9 261 aa13.32□□□□□ -0.28
PTPRA-201ENST00000216877 SLC25A21Q9BQT8 299 aaPredicted RBP13.32□□□□□ -0.28
PTPRA-201ENST00000216877 MED31Q9Y3C7 131 aa13.32□□□□□ -0.28
PTPRA-201ENST00000216877 RALGAPA2Q2PPJ7 1873 aa13.32□□□□□ -0.28
PTPRA-201ENST00000216877 ASCC3Q8N3C0 2202 aaKnown RBP13.32□□□□□ -0.28
PTPRA-201ENST00000216877 ANKRD36A6QL64 1941 aa13.32□□□□□ -0.28
PTPRA-201ENST00000216877 SOD3P08294 240 aa13.32□□□□□ -0.28
PTPRA-201ENST00000216877 JMJD7P0C870 316 aa13.32□□□□□ -0.28
PTPRA-201ENST00000216877 SLC25A4P12235 298 aa13.32□□□□□ -0.28
PTPRA-201ENST00000216877 C5AR1P21730 350 aa13.32□□□□□ -0.28
PTPRA-201ENST00000216877 THNSL2Q86YJ6 484 aa13.32□□□□□ -0.28
PTPRA-201ENST00000216877 ZSCAN4Q8NAM6 433 aaPredicted RBP13.32□□□□□ -0.28
PTPRA-201ENST00000216877 WFDC5Q8TCV5 224 aa13.32□□□□□ -0.28
PTPRA-201ENST00000216877 SLC25A43Q8WUT9 341 aaPredicted RBP13.32□□□□□ -0.28
PTPRA-201ENST00000216877 SLC39A7Q92504 469 aa13.32□□□□□ -0.28
PTPRA-201ENST00000216877 OR14J1Q9UGF5 321 aa13.32□□□□□ -0.28
PTPRA-201ENST00000216877 CNOT4O95628 575 aaKnown RBP13.31□□□□□ -0.28
PTPRA-201ENST00000216877 APLNRP35414 380 aa13.31□□□□□ -0.28
PTPRA-201ENST00000216877 RPS11P62280 158 aaKnown RBP eCLIP13.31□□□□□ -0.28
PTPRA-201ENST00000216877 ENPP2Q13822 863 aa13.31□□□□□ -0.28
PTPRA-201ENST00000216877 FAM180AQ6UWF9 173 aa13.31□□□□□ -0.28
PTPRA-201ENST00000216877 RANBP3LQ86VV4 465 aaPredicted RBP13.31□□□□□ -0.28
PTPRA-201ENST00000216877 CARFQ8N187 725 aa13.31□□□□□ -0.28
PTPRA-201ENST00000216877 ZNF248Q8NDW4 579 aa13.31□□□□□ -0.28
PTPRA-201ENST00000216877 CBLN4Q9NTU7 201 aa13.31□□□□□ -0.28
PTPRA-201ENST00000216877 TRAV8-7A0A075B6U6 113 aa13.31□□□□□ -0.28
PTPRA-201ENST00000216877 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms