RNA–Protein interactions for RNA: ENST00000215793.12

SF3A1-201, Transcript of splicing factor 3a subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A1, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-201ENST00000215793 AARDQ4LEZ3 155 aa12.42□□□□□ -0.42
SF3A1-201ENST00000215793 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.42□□□□□ -0.42
SF3A1-201ENST00000215793 OIP5O43482 229 aa12.42□□□□□ -0.42
SF3A1-201ENST00000215793 TMPRSS11DO60235 418 aa12.42□□□□□ -0.42
SF3A1-201ENST00000215793 SOD1P00441 154 aa12.42□□□□□ -0.42
SF3A1-201ENST00000215793 HLA-DOBP13765 273 aa12.42□□□□□ -0.42
SF3A1-201ENST00000215793 SLC7A6Q92536 515 aa12.42□□□□□ -0.42
SF3A1-201ENST00000215793 SLC35B4Q969S0 331 aa12.42□□□□□ -0.42
SF3A1-201ENST00000215793 MVB12AQ96EY5 273 aa12.42□□□□□ -0.42
SF3A1-201ENST00000215793 HINT3Q9NQE9 182 aaKnown RBP12.42□□□□□ -0.42
SF3A1-201ENST00000215793 NTNG1Q9Y2I2 539 aa12.42□□□□□ -0.42
SF3A1-201ENST00000215793 BRWD1Q9NSI6 2320 aa12.42□□□□□ -0.42
SF3A1-201ENST00000215793 EN2P19622 333 aaPredicted RBP12.42□□□□□ -0.42
SF3A1-201ENST00000215793 RBP2P50120 134 aa12.42□□□□□ -0.42
SF3A1-201ENST00000215793 HABP2Q14520 560 aaPredicted RBP12.42□□□□□ -0.42
SF3A1-201ENST00000215793 FAM122BQ7Z309 247 aa12.42□□□□□ -0.42
SF3A1-201ENST00000215793 SYS1Q8N2H4 156 aa12.42□□□□□ -0.42
SF3A1-201ENST00000215793 OR6K3Q8NGY3 331 aa12.42□□□□□ -0.42
SF3A1-201ENST00000215793 BAHD1Q8TBE0 780 aaPredicted RBP12.42□□□□□ -0.42
SF3A1-201ENST00000215793 ATOH1Q92858 354 aaPredicted RBP12.42□□□□□ -0.42
SF3A1-201ENST00000215793 DUSP21Q9H596 190 aa12.42□□□□□ -0.42
SF3A1-201ENST00000215793 CGGBP1Q9UFW8 167 aaPredicted RBP12.42□□□□□ -0.42
SF3A1-201ENST00000215793 B3GALT5Q9Y2C3 310 aa12.42□□□□□ -0.42
SF3A1-201ENST00000215793 OR6C76A6NM76 312 aa12.41□□□□□ -0.42
SF3A1-201ENST00000215793 ZAR1LA6NP61 321 aa12.41□□□□□ -0.42
SF3A1-201ENST00000215793 IDSB3KWA1 339 aa12.41□□□□□ -0.42
SF3A1-201ENST00000215793 TPOP07202 933 aa12.41□□□□□ -0.42
SF3A1-201ENST00000215793 DDOSTP39656 456 aa12.41□□□□□ -0.42
SF3A1-201ENST00000215793 DIO1P49895 249 aa12.41□□□□□ -0.42
SF3A1-201ENST00000215793 NAA40Q86UY6 237 aa12.41□□□□□ -0.42
SF3A1-201ENST00000215793 ZADH2Q8N4Q0 377 aa12.41□□□□□ -0.42
SF3A1-201ENST00000215793 ARIH2OSQ8N7S6 290 aa12.41□□□□□ -0.42
SF3A1-201ENST00000215793 OR51S1Q8NGJ8 323 aa12.41□□□□□ -0.42
SF3A1-201ENST00000215793 OR1S2Q8NGQ3 325 aa12.41□□□□□ -0.42
SF3A1-201ENST00000215793 PKMYT1Q99640 499 aa12.41□□□□□ -0.42
SF3A1-201ENST00000215793 OR11A1Q9GZK7 315 aa12.41□□□□□ -0.42
SF3A1-201ENST00000215793 DECR2Q9NUI1 292 aa12.41□□□□□ -0.42
SF3A1-201ENST00000215793 ACOXLQ9NUZ1 547 aa12.41□□□□□ -0.42
SF3A1-201ENST00000215793 TAS2R5Q9NYW4 299 aa12.41□□□□□ -0.42
SF3A1-201ENST00000215793 LOC107986453A0A1B0GWG9 222 aa12.41□□□□□ -0.42
SF3A1-201ENST00000215793 C20orf202A1L168 122 aa12.41□□□□□ -0.42
SF3A1-201ENST00000215793 FGF17O60258 216 aa12.41□□□□□ -0.42
SF3A1-201ENST00000215793 HLA-HP01893 362 aa12.41□□□□□ -0.42
SF3A1-201ENST00000215793 OR8B8Q15620 311 aa12.41□□□□□ -0.42
SF3A1-201ENST00000215793 OR51A4Q8NGJ6 313 aa12.41□□□□□ -0.42
SF3A1-201ENST00000215793 C6orf106Q9H6K1 298 aaPredicted RBP12.41□□□□□ -0.42
SF3A1-201ENST00000215793 H0YIG0 161 aa12.41□□□□□ -0.42
SF3A1-201ENST00000215793 ST8SIA3O43173 380 aa12.41□□□□□ -0.42
SF3A1-201ENST00000215793 SLC2A1P11166 492 aa12.41□□□□□ -0.42
SF3A1-201ENST00000215793 FOLR1P15328 257 aa12.41□□□□□ -0.42
SF3A1-201ENST00000215793 ETV1P50549 477 aa12.41□□□□□ -0.42
SF3A1-201ENST00000215793 GCNT2Q8N0V5 402 aa12.41□□□□□ -0.42
SF3A1-201ENST00000215793 LFNGQ8NES3 379 aa12.41□□□□□ -0.42
SF3A1-201ENST00000215793 EMG1Q92979 244 aaKnown RBP12.41□□□□□ -0.42
SF3A1-201ENST00000215793 RNF170Q96K19 258 aa12.41□□□□□ -0.42
SF3A1-201ENST00000215793 LAT2Q9GZY6 243 aa12.41□□□□□ -0.42
SF3A1-201ENST00000215793 EXOSC3Q9NQT5 275 aaKnown RBP12.41□□□□□ -0.42
SF3A1-201ENST00000215793 SSUH2Q9Y2M2 353 aa12.41□□□□□ -0.42
SF3A1-201ENST00000215793 HSPB2A8KAH6 182 aa12.41□□□□□ -0.42
SF3A1-201ENST00000215793 HSPB2Q16082 182 aa12.41□□□□□ -0.42
SF3A1-201ENST00000215793 RSPO2Q6UXX9 243 aaPredicted RBP12.41□□□□□ -0.42
SF3A1-201ENST00000215793 GDPD3Q7L5L3 318 aa12.41□□□□□ -0.42
SF3A1-201ENST00000215793 TMPRSS7Q7RTY8 843 aa12.41□□□□□ -0.42
SF3A1-201ENST00000215793 ST8SIA1Q92185 356 aa12.41□□□□□ -0.42
SF3A1-201ENST00000215793 IP6K3Q96PC2 410 aa12.41□□□□□ -0.42
SF3A1-201ENST00000215793 EXO1Q9UQ84 846 aaKnown RBP12.41□□□□□ -0.42
SF3A1-201ENST00000215793 FITM1A5D6W6 292 aa12.4□□□□□ -0.42
SF3A1-201ENST00000215793 POM121BA6NF01 834 aa12.4□□□□□ -0.42
SF3A1-201ENST00000215793 PRRT4C9JH25 899 aa12.4□□□□□ -0.42
SF3A1-201ENST00000215793 DEGS1O15121 323 aa12.4□□□□□ -0.42
SF3A1-201ENST00000215793 SPI1P17947 270 aa12.4□□□□□ -0.42
SF3A1-201ENST00000215793 CCR5P51681 352 aa12.4□□□□□ -0.42
SF3A1-201ENST00000215793 ASAH1Q13510 395 aa12.4□□□□□ -0.42
SF3A1-201ENST00000215793 ACSM5Q6NUN0 579 aa12.4□□□□□ -0.42
SF3A1-201ENST00000215793 TMEM217Q8N7C4 229 aa12.4□□□□□ -0.42
SF3A1-201ENST00000215793 BCORP1Q8N888 145 aa12.4□□□□□ -0.42
SF3A1-201ENST00000215793 C15orf54Q8N8G6 183 aa12.4□□□□□ -0.42
SF3A1-201ENST00000215793 SCARB1Q8WTV0 552 aa12.4□□□□□ -0.42
SF3A1-201ENST00000215793 RTL8AQ9BWD3 113 aa12.4□□□□□ -0.42
SF3A1-201ENST00000215793 NDUFB11Q9NX14 153 aa12.4□□□□□ -0.42
SF3A1-201ENST00000215793 SLC25A37Q9NYZ2 338 aa12.4□□□□□ -0.42
SF3A1-201ENST00000215793 A0A087WV62 115 aa12.4□□□□□ -0.42
SF3A1-201ENST00000215793 STMND1H3BQB6 276 aa12.4□□□□□ -0.42
SF3A1-201ENST00000215793 SELEP16581 610 aa12.4□□□□□ -0.42
SF3A1-201ENST00000215793 CPEP16870 476 aa12.4□□□□□ -0.42
SF3A1-201ENST00000215793 LGALS4P56470 323 aa12.4□□□□□ -0.42
SF3A1-201ENST00000215793 GPR85P60893 370 aa12.4□□□□□ -0.42
SF3A1-201ENST00000215793 RPS23P62266 143 aaKnown RBP12.4□□□□□ -0.42
SF3A1-201ENST00000215793 SELENBP1Q13228 472 aa12.4□□□□□ -0.42
SF3A1-201ENST00000215793 ACKR1Q16570 336 aa12.4□□□□□ -0.42
SF3A1-201ENST00000215793 PHLDA2Q53GA4 152 aa12.4□□□□□ -0.42
SF3A1-201ENST00000215793 OTUD1Q5VV17 481 aaPredicted RBP12.4□□□□□ -0.42
SF3A1-201ENST00000215793 C11orf40Q8WZ69 217 aa12.4□□□□□ -0.42
SF3A1-201ENST00000215793 YIPF5Q969M3 257 aa12.4□□□□□ -0.42
SF3A1-201ENST00000215793 EGLN1Q9GZT9 426 aa12.4□□□□□ -0.42
SF3A1-201ENST00000215793 MICAL3Q7RTP6 2002 aa12.4□□□□□ -0.42
SF3A1-201ENST00000215793 HPNP05981 417 aa12.4□□□□□ -0.42
SF3A1-201ENST00000215793 IL10RAQ13651 578 aa12.4□□□□□ -0.42
SF3A1-201ENST00000215793 SLC10A1Q14973 349 aa12.4□□□□□ -0.42
SF3A1-201ENST00000215793 KANSL1Q7Z3B3 1105 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms