RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Sntb1Q99L88 537 aaKnown RBP11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 Rpl11Q9CXW4 178 aaKnown RBP11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 Dusp3Q9D7X3 185 aa11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 Phyhd1Q9DB26 291 aa11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 FastkQ9JIX9 511 aa11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 Olfr66F8VQ01 311 aa11.09□□□□□ -0.63
Trim56-201ENSMUST00000054384 Cldn34aG3UW52 211 aa11.09□□□□□ -0.63
Trim56-201ENSMUST00000054384 Gm28051J3QMA2 81 aa11.09□□□□□ -0.63
Trim56-201ENSMUST00000054384 Cst3P21460 140 aa11.09□□□□□ -0.63
Trim56-201ENSMUST00000054384 Tnfaip3Q60769 775 aa11.09□□□□□ -0.63
Trim56-201ENSMUST00000054384 Trim23Q8BGX0 574 aa11.09□□□□□ -0.63
Trim56-201ENSMUST00000054384 Pi15Q8BS03 258 aa11.09□□□□□ -0.63
Trim56-201ENSMUST00000054384 Tp53inp2Q8CFU8 221 aa11.09□□□□□ -0.63
Trim56-201ENSMUST00000054384 Hmgcll1Q8JZS7 343 aa11.09□□□□□ -0.63
Trim56-201ENSMUST00000054384 NrarpQ91ZA8 114 aa11.09□□□□□ -0.63
Trim56-201ENSMUST00000054384 Rhox2aQ9D4Y3 191 aa11.09□□□□□ -0.63
Trim56-201ENSMUST00000054384 PtprvP70289 1705 aa11.09□□□□□ -0.63
Trim56-201ENSMUST00000054384 Gm1110F6Y113 635 aa11.09□□□□□ -0.63
Trim56-201ENSMUST00000054384 Tmem64Q3U145 381 aa11.09□□□□□ -0.63
Trim56-201ENSMUST00000054384 Mtnr1bQ8CIQ6 364 aa11.09□□□□□ -0.63
Trim56-201ENSMUST00000054384 Pfn4Q9D6I3 129 aa11.09□□□□□ -0.63
Trim56-201ENSMUST00000054384 Rpl22l1Q9D7S7 122 aaKnown RBP11.09□□□□□ -0.63
Trim56-201ENSMUST00000054384 Lrp6O88572 1613 aa11.09□□□□□ -0.63
Trim56-201ENSMUST00000054384 Olfr587-ps1A0A1B0GSS1 159 aa11.09□□□□□ -0.63
Trim56-201ENSMUST00000054384 Zfp735B1ARH2 734 aa11.09□□□□□ -0.63
Trim56-201ENSMUST00000054384 Gm20683H3BKJ1 410 aa11.09□□□□□ -0.63
Trim56-201ENSMUST00000054384 NfybP63139 207 aa11.09□□□□□ -0.63
Trim56-201ENSMUST00000054384 Smpd1Q04519 627 aa11.09□□□□□ -0.63
Trim56-201ENSMUST00000054384 Fahd2Q3TC72 313 aa11.09□□□□□ -0.63
Trim56-201ENSMUST00000054384 Olfr1212Q7TR08 311 aa11.09□□□□□ -0.63
Trim56-201ENSMUST00000054384 Sez6Q7TSK2 991 aa11.09□□□□□ -0.63
Trim56-201ENSMUST00000054384 Slc22a29Q8BWG6 551 aa11.09□□□□□ -0.63
Trim56-201ENSMUST00000054384 Q8C3W1 322 aa11.09□□□□□ -0.63
Trim56-201ENSMUST00000054384 Cdkl1Q8CEQ0 352 aa11.09□□□□□ -0.63
Trim56-201ENSMUST00000054384 Zfand2bQ91X58 257 aa11.09□□□□□ -0.63
Trim56-201ENSMUST00000054384 Insm2Q9JMC2 493 aa11.09□□□□□ -0.63
Trim56-201ENSMUST00000054384 Myo7aP97479 2215 aa11.09□□□□□ -0.63
Trim56-201ENSMUST00000054384 Snrnp200Q6P4T2 2136 aaKnown RBP11.09□□□□□ -0.63
Trim56-201ENSMUST00000054384 P06336 421 aa11.09□□□□□ -0.63
Trim56-201ENSMUST00000054384 Rac1P63001 192 aa11.09□□□□□ -0.63
Trim56-201ENSMUST00000054384 Olfr1065Q7TR70 313 aa11.09□□□□□ -0.63
Trim56-201ENSMUST00000054384 Orai1Q8BWG9 304 aa11.09□□□□□ -0.63
Trim56-201ENSMUST00000054384 GcaQ8VC88 220 aa11.09□□□□□ -0.63
Trim56-201ENSMUST00000054384 Olfr872E9PVW2 323 aa11.09□□□□□ -0.63
Trim56-201ENSMUST00000054384 Olfr64F8VPZ8 307 aa11.09□□□□□ -0.63
Trim56-201ENSMUST00000054384 Gm21761J3QK00 171 aa11.09□□□□□ -0.63
Trim56-201ENSMUST00000054384 Doc2bP70169 412 aa11.09□□□□□ -0.63
Trim56-201ENSMUST00000054384 Pitx1P70314 315 aa11.09□□□□□ -0.63
Trim56-201ENSMUST00000054384 Arntl2Q2VPD4 579 aa11.09□□□□□ -0.63
Trim56-201ENSMUST00000054384 Fpr-rs7Q71MR7 338 aa11.09□□□□□ -0.63
Trim56-201ENSMUST00000054384 Dtx3Q80V91 347 aa11.09□□□□□ -0.63
Trim56-201ENSMUST00000054384 Mrps10Q80ZK0 160 aaKnown RBP11.09□□□□□ -0.63
Trim56-201ENSMUST00000054384 Mrpl22Q8BU88 206 aaKnown RBP11.09□□□□□ -0.63
Trim56-201ENSMUST00000054384 Mmgt2Q8R3L0 123 aa11.09□□□□□ -0.63
Trim56-201ENSMUST00000054384 Olfr633Q8VF02 312 aa11.09□□□□□ -0.63
Trim56-201ENSMUST00000054384 Ceacam2Q925P2 520 aa11.09□□□□□ -0.63
Trim56-201ENSMUST00000054384 PigcQ9CXR4 297 aa11.09□□□□□ -0.63
Trim56-201ENSMUST00000054384 Olfr663A0A1B0GSI9 319 aa11.09□□□□□ -0.63
Trim56-201ENSMUST00000054384 Crmp1P97427 572 aa11.09□□□□□ -0.63
Trim56-201ENSMUST00000054384 Ms4a15Q3UPL6 245 aa11.09□□□□□ -0.63
Trim56-201ENSMUST00000054384 Slc38a8Q5HZH7 432 aa11.09□□□□□ -0.63
Trim56-201ENSMUST00000054384 Slc38a1Q8K2P7 485 aa11.09□□□□□ -0.63
Trim56-201ENSMUST00000054384 Nxph3Q91VX5 252 aa11.09□□□□□ -0.63
Trim56-201ENSMUST00000054384 Moxd1Q9CXI3 613 aa11.09□□□□□ -0.63
Trim56-201ENSMUST00000054384 Q9D5Y0 588 aa11.09□□□□□ -0.63
Trim56-201ENSMUST00000054384 Mrps34Q9JIK9 218 aa11.09□□□□□ -0.63
Trim56-201ENSMUST00000054384 4930451I11RikE9Q9R3 111 aa11.09□□□□□ -0.63
Trim56-201ENSMUST00000054384 SnrpbP27048 231 aaKnown RBP11.09□□□□□ -0.63
Trim56-201ENSMUST00000054384 Mex3dQ3UE17 643 aaKnown RBP11.09□□□□□ -0.63
Trim56-201ENSMUST00000054384 Olfr429Q7TRW1 312 aa11.09□□□□□ -0.63
Trim56-201ENSMUST00000054384 Olfr558Q8VGZ7 317 aa11.09□□□□□ -0.63
Trim56-201ENSMUST00000054384 Washc3Q9CR27 194 aa11.09□□□□□ -0.63
Trim56-201ENSMUST00000054384 Bud23Q9CY21 281 aa11.09□□□□□ -0.63
Trim56-201ENSMUST00000054384 CutcQ9D8X1 272 aa11.09□□□□□ -0.63
Trim56-201ENSMUST00000054384 Slc22a17Q9D9E0 401 aa11.09□□□□□ -0.63
Trim56-201ENSMUST00000054384 Rab13Q9DD03 202 aa11.09□□□□□ -0.63
Trim56-201ENSMUST00000054384 MNCb-2990Q9JJ93 142 aa11.09□□□□□ -0.63
Trim56-201ENSMUST00000054384 Lpar2Q9JL06 348 aa11.09□□□□□ -0.63
Trim56-201ENSMUST00000054384 C7D3YXF5 845 aa11.09□□□□□ -0.63
Trim56-201ENSMUST00000054384 IlkO55222 452 aa11.09□□□□□ -0.63
Trim56-201ENSMUST00000054384 Htr5aP30966 357 aa11.09□□□□□ -0.63
Trim56-201ENSMUST00000054384 Cd6Q61003 665 aa11.09□□□□□ -0.63
Trim56-201ENSMUST00000054384 Nol4lQ6DIB4 494 aa11.09□□□□□ -0.63
Trim56-201ENSMUST00000054384 Tas2r113Q7M711 309 aa11.09□□□□□ -0.63
Trim56-201ENSMUST00000054384 Olfr1388Q8VFA3 311 aa11.09□□□□□ -0.63
Trim56-201ENSMUST00000054384 Olfr131Q8VGC8 314 aa11.09□□□□□ -0.63
Trim56-201ENSMUST00000054384 Emid1Q91VF5 444 aa11.09□□□□□ -0.63
Trim56-201ENSMUST00000054384 Rnaseh2cQ9CQ18 166 aa11.09□□□□□ -0.63
Trim56-201ENSMUST00000054384 Plce1Q8K4S1 2282 aa11.08□□□□□ -0.64
Trim56-201ENSMUST00000054384 Nupl2Q8CIC2 420 aaKnown RBP11.08□□□□□ -0.64
Trim56-201ENSMUST00000054384 Dusp15Q8R4V2 235 aa11.08□□□□□ -0.64
Trim56-201ENSMUST00000054384 Tmem30aQ8VEK0 364 aa11.08□□□□□ -0.64
Trim56-201ENSMUST00000054384 Olig2Q9EQW6 323 aa11.08□□□□□ -0.64
Trim56-201ENSMUST00000054384 FaimQ9WUD8 179 aa11.08□□□□□ -0.64
Trim56-201ENSMUST00000054384 Scn1aA2APX8 2009 aa11.08□□□□□ -0.64
Trim56-201ENSMUST00000054384 Zfp141G3UY09 685 aa11.08□□□□□ -0.64
Trim56-201ENSMUST00000054384 GzmcP08882 248 aa11.08□□□□□ -0.64
Trim56-201ENSMUST00000054384 Tppp2Q0P5Y3 170 aa11.08□□□□□ -0.64
Trim56-201ENSMUST00000054384 Rnf149Q3U2C5 394 aa11.08□□□□□ -0.64
Trim56-201ENSMUST00000054384 FuzQ3UYI6 415 aa11.08□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 44.1 ms