RNA–Protein interactions for RNA: ENSMUST00000052648.8

Ccdc28a-201, Transcript of Coiled-coil domain-containing 28A, mousemouse

TSL 1 (best) BASIC

Gene Ccdc28a, Length 2,255 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-201ENSMUST00000052648 PmelQ60696 626 aa7.9□□□□□ -1.14
Ccdc28a-201ENSMUST00000052648 Tlx2Q61663 284 aa7.9□□□□□ -1.14
Ccdc28a-201ENSMUST00000052648 Ptpmt1Q66GT5 193 aa7.9□□□□□ -1.14
Ccdc28a-201ENSMUST00000052648 Olfr1286Q7TQY2 305 aa7.9□□□□□ -1.14
Ccdc28a-201ENSMUST00000052648 Olfr1282Q7TQY5 305 aa7.9□□□□□ -1.14
Ccdc28a-201ENSMUST00000052648 Tbl1xr1Q8BHJ5 514 aa7.9□□□□□ -1.14
Ccdc28a-201ENSMUST00000052648 Lrrn3Q8CBC6 707 aa7.9□□□□□ -1.14
Ccdc28a-201ENSMUST00000052648 Slc49a3Q8CE47 516 aa7.9□□□□□ -1.14
Ccdc28a-201ENSMUST00000052648 Cdc123Q8CII2 336 aa7.9□□□□□ -1.14
Ccdc28a-201ENSMUST00000052648 Emc4Q9CZX9 183 aa7.9□□□□□ -1.14
Ccdc28a-201ENSMUST00000052648 Asf1bQ9DAP7 202 aa7.9□□□□□ -1.14
Ccdc28a-201ENSMUST00000052648 DhdhQ9DBB8 333 aa7.9□□□□□ -1.14
Ccdc28a-201ENSMUST00000052648 Rarres2Q9DD06 162 aa7.9□□□□□ -1.14
Ccdc28a-201ENSMUST00000052648 Dll4Q9JI71 686 aa7.9□□□□□ -1.14
Ccdc28a-201ENSMUST00000052648 Nrip3Q9JJR9 240 aa7.9□□□□□ -1.14
Ccdc28a-201ENSMUST00000052648 Aldh9a1Q9JLJ2 494 aa7.9□□□□□ -1.14
Ccdc28a-201ENSMUST00000052648 FetubQ9QXC1 388 aa7.9□□□□□ -1.14
Ccdc28a-201ENSMUST00000052648 IghdA0A0A6YW14 291 aa7.9□□□□□ -1.15
Ccdc28a-201ENSMUST00000052648 Olfr560A0A1B0GSU5 314 aa7.9□□□□□ -1.15
Ccdc28a-201ENSMUST00000052648 Hpse2B2RY83 592 aa7.9□□□□□ -1.15
Ccdc28a-201ENSMUST00000052648 CymB7ZWD6 379 aa7.9□□□□□ -1.15
Ccdc28a-201ENSMUST00000052648 Gm42791D3YYB5 209 aa7.9□□□□□ -1.15
Ccdc28a-201ENSMUST00000052648 Erich2E9Q1A6 463 aa7.9□□□□□ -1.15
Ccdc28a-201ENSMUST00000052648 Zfp988F6VKC7 633 aa7.9□□□□□ -1.15
Ccdc28a-201ENSMUST00000052648 Fbxw25F7C9P2 466 aa7.9□□□□□ -1.15
Ccdc28a-201ENSMUST00000052648 Zfp989H3BLB0 661 aa7.9□□□□□ -1.15
Ccdc28a-201ENSMUST00000052648 Gm21411J3KMS0 136 aa7.9□□□□□ -1.15
Ccdc28a-201ENSMUST00000052648 Gm2035J3QP87 144 aa7.9□□□□□ -1.15
Ccdc28a-201ENSMUST00000052648 Wnt9bO35468 359 aa7.9□□□□□ -1.15
Ccdc28a-201ENSMUST00000052648 P2rx6O54803 389 aa7.9□□□□□ -1.15
Ccdc28a-201ENSMUST00000052648 Hprt1P00493 218 aa7.9□□□□□ -1.15
Ccdc28a-201ENSMUST00000052648 Il6P08505 211 aa7.9□□□□□ -1.15
Ccdc28a-201ENSMUST00000052648 Igf2P09535 180 aa7.9□□□□□ -1.15
Ccdc28a-201ENSMUST00000052648 Erp29P57759 262 aaKnown RBP7.9□□□□□ -1.15
Ccdc28a-201ENSMUST00000052648 DtymkP97930 212 aa7.9□□□□□ -1.15
Ccdc28a-201ENSMUST00000052648 Scgb1a1Q06318 96 aa7.9□□□□□ -1.15
Ccdc28a-201ENSMUST00000052648 Zfp987Q32P14 633 aa7.9□□□□□ -1.15
Ccdc28a-201ENSMUST00000052648 Klhl21Q3U410 597 aa7.9□□□□□ -1.15
Ccdc28a-201ENSMUST00000052648 TefmQ5SSK3 364 aaKnown RBP7.9□□□□□ -1.15
Ccdc28a-201ENSMUST00000052648 Laptm4aQ60961 233 aa7.9□□□□□ -1.15
Ccdc28a-201ENSMUST00000052648 Snap91Q61548 901 aa7.9□□□□□ -1.15
Ccdc28a-201ENSMUST00000052648 Zfp866Q6PGD2 520 aa7.9□□□□□ -1.15
Ccdc28a-201ENSMUST00000052648 Hsh2dQ6VYH9 334 aa7.9□□□□□ -1.15
Ccdc28a-201ENSMUST00000052648 Olfr524Q7TRU0 318 aa7.9□□□□□ -1.15
Ccdc28a-201ENSMUST00000052648 Galnt12Q8BGT9 576 aa7.9□□□□□ -1.15
Ccdc28a-201ENSMUST00000052648 Lrfn5Q8BXA0 719 aa7.9□□□□□ -1.15
Ccdc28a-201ENSMUST00000052648 Rad51ap1Q8C551 337 aa7.9□□□□□ -1.15
Ccdc28a-201ENSMUST00000052648 Slc6a8Q8VBW1 640 aa7.9□□□□□ -1.15
Ccdc28a-201ENSMUST00000052648 Ugt2b37Q8VCN3 530 aa7.9□□□□□ -1.15
Ccdc28a-201ENSMUST00000052648 Olfr215Q8VF82 310 aa7.9□□□□□ -1.15
Ccdc28a-201ENSMUST00000052648 Olfr777Q8VFH3 311 aa7.9□□□□□ -1.15
Ccdc28a-201ENSMUST00000052648 Sf3b5Q923D4 86 aaKnown RBP7.9□□□□□ -1.15
Ccdc28a-201ENSMUST00000052648 Olfr642Q924X8 314 aa7.9□□□□□ -1.15
Ccdc28a-201ENSMUST00000052648 Cdca3Q99M54 266 aa7.9□□□□□ -1.15
Ccdc28a-201ENSMUST00000052648 Ier3ip1Q9CR20 82 aa7.9□□□□□ -1.15
Ccdc28a-201ENSMUST00000052648 Sesn3Q9CYP7 492 aa7.9□□□□□ -1.15
Ccdc28a-201ENSMUST00000052648 Rnf128Q9D304 428 aa7.9□□□□□ -1.15
Ccdc28a-201ENSMUST00000052648 Rhox2aQ9D4Y3 191 aa7.9□□□□□ -1.15
Ccdc28a-201ENSMUST00000052648 Med29Q9DB91 199 aa7.9□□□□□ -1.15
Ccdc28a-201ENSMUST00000052648 Isyna1Q9JHU9 557 aa7.9□□□□□ -1.15
Ccdc28a-201ENSMUST00000052648 Heatr5aQ5PRF0 2038 aa7.89□□□□□ -1.15
Ccdc28a-201ENSMUST00000052648 BC024063A0A1W2P7G7 749 aa7.89□□□□□ -1.15
Ccdc28a-201ENSMUST00000052648 Gm5072A2AHM1 344 aa7.89□□□□□ -1.15
Ccdc28a-201ENSMUST00000052648 Gm13102A2ASJ3 519 aa7.89□□□□□ -1.15
Ccdc28a-201ENSMUST00000052648 Olfr294F7CWV4 335 aa7.89□□□□□ -1.15
Ccdc28a-201ENSMUST00000052648 Shisa8J3QNX5 399 aa7.89□□□□□ -1.15
Ccdc28a-201ENSMUST00000052648 BckdkO55028 412 aa7.89□□□□□ -1.15
Ccdc28a-201ENSMUST00000052648 Alx3O70137 343 aa7.89□□□□□ -1.15
Ccdc28a-201ENSMUST00000052648 Pdlim3O70209 316 aaKnown RBP7.89□□□□□ -1.15
Ccdc28a-201ENSMUST00000052648 Sox3P53784 375 aa7.89□□□□□ -1.15
Ccdc28a-201ENSMUST00000052648 Cpeb1P70166 561 aa7.89□□□□□ -1.15
Ccdc28a-201ENSMUST00000052648 Crmp1P97427 572 aa7.89□□□□□ -1.15
Ccdc28a-201ENSMUST00000052648 S100gP97816 79 aa7.89□□□□□ -1.15
Ccdc28a-201ENSMUST00000052648 Smim24Q0VG18 120 aa7.89□□□□□ -1.15
Ccdc28a-201ENSMUST00000052648 Lsg1Q3UM18 644 aaKnown RBP7.89□□□□□ -1.15
Ccdc28a-201ENSMUST00000052648 Acvr1bQ61271 505 aa7.89□□□□□ -1.15
Ccdc28a-201ENSMUST00000052648 Clcn4Q61418 747 aa7.89□□□□□ -1.15
Ccdc28a-201ENSMUST00000052648 Npepl1Q6NSR8 524 aa7.89□□□□□ -1.15
Ccdc28a-201ENSMUST00000052648 Arhgef4Q7TNR9 484 aa7.89□□□□□ -1.15
Ccdc28a-201ENSMUST00000052648 Slc34a3Q80SU6 601 aa7.89□□□□□ -1.15
Ccdc28a-201ENSMUST00000052648 Jazf1Q80ZQ5 243 aa7.89□□□□□ -1.15
Ccdc28a-201ENSMUST00000052648 Znf8Q8BGV5 572 aa7.89□□□□□ -1.15
Ccdc28a-201ENSMUST00000052648 Zpld1Q8BGZ8 415 aa7.89□□□□□ -1.15
Ccdc28a-201ENSMUST00000052648 Coq3Q8BMS4 370 aa7.89□□□□□ -1.15
Ccdc28a-201ENSMUST00000052648 NrrosQ8BMT4 693 aa7.89□□□□□ -1.15
Ccdc28a-201ENSMUST00000052648 ShfQ8CG80 238 aa7.89□□□□□ -1.15
Ccdc28a-201ENSMUST00000052648 Steap3Q8CI59 488 aa7.89□□□□□ -1.15
Ccdc28a-201ENSMUST00000052648 Rasgef1bQ8JZL7 473 aa7.89□□□□□ -1.15
Ccdc28a-201ENSMUST00000052648 Trib3Q8K4K2 354 aa7.89□□□□□ -1.15
Ccdc28a-201ENSMUST00000052648 Vmn1r231Q8R2A3 311 aa7.89□□□□□ -1.15
Ccdc28a-201ENSMUST00000052648 Mtg1Q8R2R6 326 aa7.89□□□□□ -1.15
Ccdc28a-201ENSMUST00000052648 Olfr826Q8VFU6 313 aa7.89□□□□□ -1.15
Ccdc28a-201ENSMUST00000052648 Pear1Q8VIK5 1034 aa7.89□□□□□ -1.15
Ccdc28a-201ENSMUST00000052648 Tm7sf3Q9CRG1 565 aa7.89□□□□□ -1.15
Ccdc28a-201ENSMUST00000052648 Ppp1r27Q9D119 154 aa7.89□□□□□ -1.15
Ccdc28a-201ENSMUST00000052648 Mrpl21Q9D1N9 209 aaKnown RBP7.89□□□□□ -1.15
Ccdc28a-201ENSMUST00000052648 Snapc3Q9D2C9 407 aa7.89□□□□□ -1.15
Ccdc28a-201ENSMUST00000052648 Cers5Q9D6K9 414 aa7.89□□□□□ -1.15
Ccdc28a-201ENSMUST00000052648 Izumo2Q9DA16 220 aa7.89□□□□□ -1.15
Ccdc28a-201ENSMUST00000052648 Tysnd1Q9DBA6 568 aa7.89□□□□□ -1.15
Retrieved 100 of 22,080 RNA–protein pairs in 30.2 ms