RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Wnt9bO35468 359 aa15.42■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Mas1P30554 324 aa15.42■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Cbr1P48758 277 aa15.42■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Rac1P63001 192 aa15.42■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Q80Y39 304 aa15.42■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Tmem184bQ8BG09 407 aa15.42■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Pxylp1Q8BHA9 480 aa15.42■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 LdahQ8BVA5 326 aa15.42■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Olfr768Q8VGC4 312 aa15.42■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Bbc3Q99ML1 193 aa15.42■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Tex19.2Q9D5S1 317 aa15.42■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 CutcQ9D8X1 272 aa15.42■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Impad1Q80V26 356 aa15.42■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 4930451G09RikQ8C5G4 195 aa15.42■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Mib2Q8R516 973 aa15.42■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Taf9Q8VI33 264 aa15.42■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Fuca1Q99LJ1 452 aa15.42■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Neu3Q9JMH7 418 aa15.42■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 P01881 257 aa15.42■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 P01882 290 aa15.42■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Rph3alQ768S4 302 aa15.42■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Olfr1298Q8VGE6 312 aa15.42■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Eif1bQ9CXU9 113 aa15.42■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 ShpkQ9D5J6 476 aa15.42■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 PoleQ9WVF7 2283 aa15.42■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 RbpjP31266 526 aa15.42■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Zfp987Q32P14 633 aa15.42■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Slc38a8Q5HZH7 432 aa15.42■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 SbsnQ8CIT9 700 aa15.42■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Olfr1261Q8VFB0 306 aa15.42■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Kti12Q9D1R2 351 aa15.42■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Gm9602J3QPD5 205 aa15.42■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Hoxb5P09079 269 aa15.42■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Nploc4P60670 608 aa15.42■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Vwa5b2Q3UR50 1248 aa15.42■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Bbs12Q5SUD9 708 aa15.42■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Cacfd1Q8BG21 171 aa15.42■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Trib3Q8K4K2 354 aa15.42■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 RtcAQ9D7H3 366 aa15.42■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Trp53tg5Q9D976 238 aa15.42■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Phyhd1Q9DB26 291 aa15.42■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Olfr117L7N1Z1 317 aa15.41■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Tfap2aP34056 437 aa15.41■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Hoxb13P70321 286 aa15.41■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Ms4a15Q3UPL6 245 aa15.41■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Gm1587Q3UT80 123 aa15.41■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Olfr1135Q7TR42 310 aa15.41■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Olfr130Q8VFC1 317 aa15.41■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Letmd1Q924L1 360 aa15.41■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Exosc7Q9D0M0 291 aaKnown RBP15.41■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 FastkQ9JIX9 511 aa15.41■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 2610044O15Rik8A0A087WRJ1 410 aa15.41■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Zfp160E9Q459 650 aa15.41■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Klri2Q5DT36 248 aa15.41■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 St8sia4Q64692 359 aa15.41■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Mr1Q8HWB0 341 aa15.41■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Tmem216Q9CQC4 141 aa15.41■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Glb1l3A2RSQ1 649 aa15.41■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Lin7bO88951 207 aa15.41■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Fahd2Q3TC72 313 aa15.41■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Mex3dQ3UE17 643 aaKnown RBP15.41■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Tubal3Q3UX10 446 aa15.41■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Plpp6Q9D4F2 292 aa15.41■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Gab1Q9QYY0 695 aa15.41■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Pwwp2bE9Q9M8 600 aa15.41■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Hnrnpa1P49312 320 aaKnown RBP15.41■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Kcng3P59053 433 aa15.41■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 St6gal1Q64685 403 aa15.41■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 GnptgQ6S5C2 307 aa15.41■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Mrpl58Q8R035 206 aa15.41■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Slc25a42Q8R0Y8 318 aa15.41■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Olfr360Q8VFP3 317 aa15.41■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Slc2a10Q8VHD6 536 aa15.41■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Uqcc2Q9CQY6 136 aa15.41■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 SlirpQ9D8T7 112 aaKnown RBP15.41■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Zfp831A2ADM8 1628 aa15.41■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Gm6760Q0ZNK3 87 aa15.41■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Nyap2Q8BM65 682 aa15.41■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Vmn1r83Q8R287 306 aa15.41■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Rpe65Q91ZQ5 533 aa15.41■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Mfsd4b2Q9D8I5 366 aa15.41■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Olfr1039A2ARY0 319 aa15.41■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Ces2gE9PV38 560 aa15.41■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Mrgpra7Q91ZC5 305 aa15.41■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Olfr73Q920P2 313 aa15.41■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Gm20683H3BKJ1 410 aa15.4■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 CgaP01216 120 aa15.4■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Lyg2Q3V1I0 213 aa15.4■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 MeikinQ5F2C3 434 aa15.4■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Olfr429Q7TRW1 312 aa15.4■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Olfr338Q8VGK6 306 aa15.4■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Lmntd1Q9D4C1 413 aa15.4■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Armcx4E9PWM3 2356 aa15.4■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Raet1cO08604 253 aa15.4■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 H2-T23P06339 357 aa15.4■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 EvlP70429 414 aa15.4■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Nxph2Q61199 261 aa15.4■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Hspb2Q99PR8 182 aa15.4■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Scgb1b10A0A087WPW0 93 aa15.4■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Olfr316A0A0N4SVP2 306 aa15.4■□□□□ 0.06
Retrieved 100 of 22,080 RNA–protein pairs in 28.9 ms