RNA–Protein interactions for RNA: ENST00000641259.1

RBFOX1-224, Transcript of RNA binding fox-1 homolog 1, humanhuman

BASIC

Gene RBFOX1, Length 3,651 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-224ENST00000641259 IBTKQ9P2D0 1353 aaPredicted RBP13.95□□□□□ -0.18
RBFOX1-224ENST00000641259 A1BGP04217 495 aa13.95□□□□□ -0.18
RBFOX1-224ENST00000641259 CAPN2P17655 700 aa13.95□□□□□ -0.18
RBFOX1-224ENST00000641259 SMC3Q9UQE7 1217 aa13.95□□□□□ -0.18
RBFOX1-224ENST00000641259 EP400Q96L91 3159 aa13.95□□□□□ -0.18
RBFOX1-224ENST00000641259 TUBGCP6Q96RT7 1819 aa13.94□□□□□ -0.18
RBFOX1-224ENST00000641259 RAD51AP2Q09MP3 1159 aa13.94□□□□□ -0.18
RBFOX1-224ENST00000641259 POLA2Q14181 598 aa13.94□□□□□ -0.18
RBFOX1-224ENST00000641259 DEF6Q9H4E7 631 aa13.94□□□□□ -0.18
RBFOX1-224ENST00000641259 CLIP2Q9UDT6 1046 aa13.94□□□□□ -0.18
RBFOX1-224ENST00000641259 HMMRO75330 724 aa13.94□□□□□ -0.18
RBFOX1-224ENST00000641259 RGS22Q8NE09 1264 aa13.94□□□□□ -0.18
RBFOX1-224ENST00000641259 KIF18AQ8NI77 898 aa13.94□□□□□ -0.18
RBFOX1-224ENST00000641259 SSH3Q8TE77 659 aa13.94□□□□□ -0.18
RBFOX1-224ENST00000641259 ZSWIM4Q9H7M6 989 aa13.94□□□□□ -0.18
RBFOX1-224ENST00000641259 NUP188Q5SRE5 1749 aa13.94□□□□□ -0.18
RBFOX1-224ENST00000641259 ZNF397Q8NF99 534 aaPredicted RBP13.94□□□□□ -0.18
RBFOX1-224ENST00000641259 AFDNP55196 1824 aaKnown RBP13.93□□□□□ -0.18
RBFOX1-224ENST00000641259 TTC22Q5TAA0 569 aa13.93□□□□□ -0.18
RBFOX1-224ENST00000641259 RIC3Q7Z5B4 369 aa13.93□□□□□ -0.18
RBFOX1-224ENST00000641259 KIAA1524Q8TCG1 905 aa13.93□□□□□ -0.18
RBFOX1-224ENST00000641259 DOT1LQ8TEK3 1739 aa13.93□□□□□ -0.18
RBFOX1-224ENST00000641259 SALL3Q9BXA9 1300 aa13.93□□□□□ -0.18
RBFOX1-224ENST00000641259 SRGAP3O43295 1099 aa13.93□□□□□ -0.18
RBFOX1-224ENST00000641259 SUCLG2Q96I99 432 aa13.93□□□□□ -0.18
RBFOX1-224ENST00000641259 MYD88Q99836 296 aa13.93□□□□□ -0.18
RBFOX1-224ENST00000641259 ZCCHC17Q9NP64 241 aaKnown RBP13.93□□□□□ -0.18
RBFOX1-224ENST00000641259 ERCC6LQ2NKX8 1250 aa13.93□□□□□ -0.18
RBFOX1-224ENST00000641259 SYT10Q6XYQ8 523 aa13.93□□□□□ -0.18
RBFOX1-224ENST00000641259 SPATA31A1Q5TZJ5 1347 aa13.92□□□□□ -0.18
RBFOX1-224ENST00000641259 NEURL1BA8MQ27 555 aa13.92□□□□□ -0.18
RBFOX1-224ENST00000641259 SMTNL1A8MU46 457 aa13.92□□□□□ -0.18
RBFOX1-224ENST00000641259 TOM1O60784 492 aa13.92□□□□□ -0.18
RBFOX1-224ENST00000641259 TMCO3Q6UWJ1 677 aa13.92□□□□□ -0.18
RBFOX1-224ENST00000641259 LINS1Q8NG48 757 aa13.92□□□□□ -0.18
RBFOX1-224ENST00000641259 TSPYL1Q9H0U9 437 aa13.92□□□□□ -0.18
RBFOX1-224ENST00000641259 TMOD3Q9NYL9 352 aa13.92□□□□□ -0.18
RBFOX1-224ENST00000641259 DDX41Q9UJV9 622 aaKnown RBP13.92□□□□□ -0.18
RBFOX1-224ENST00000641259 ZDHHC9Q9Y397 364 aa13.92□□□□□ -0.18
RBFOX1-224ENST00000641259 UBAP1LF5GYI3 381 aa13.92□□□□□ -0.18
RBFOX1-224ENST00000641259 TTLL7Q6ZT98 887 aa13.92□□□□□ -0.18
RBFOX1-224ENST00000641259 ATG3Q9NT62 314 aa13.92□□□□□ -0.18
RBFOX1-224ENST00000641259 CWC15Q9P013 229 aaKnown RBP13.92□□□□□ -0.18
RBFOX1-224ENST00000641259 FAM173BQ6P4H8 233 aa13.92□□□□□ -0.18
RBFOX1-224ENST00000641259 ANKRD13DQ6ZTN6 518 aa13.92□□□□□ -0.18
RBFOX1-224ENST00000641259 BANK1Q8NDB2 785 aa13.92□□□□□ -0.18
RBFOX1-224ENST00000641259 IL1RAPL2Q9NP60 686 aa13.92□□□□□ -0.18
RBFOX1-224ENST00000641259 C9orf78Q9NZ63 289 aaPredicted RBP13.92□□□□□ -0.18
RBFOX1-224ENST00000641259 TFIP11Q9UBB9 837 aaKnown RBP13.92□□□□□ -0.18
RBFOX1-224ENST00000641259 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.92□□□□□ -0.18
RBFOX1-224ENST00000641259 ALDH1L1O75891 902 aa13.91□□□□□ -0.18
RBFOX1-224ENST00000641259 DDIT3P35638 169 aa13.91□□□□□ -0.18
RBFOX1-224ENST00000641259 FBXO38Q6PIJ6 1188 aa13.91□□□□□ -0.18
RBFOX1-224ENST00000641259 UBXN4Q92575 508 aa13.91□□□□□ -0.18
RBFOX1-224ENST00000641259 SLC4A9Q96Q91 983 aa13.91□□□□□ -0.18
RBFOX1-224ENST00000641259 ARGLU1Q9NWB6 273 aaPredicted RBP13.91□□□□□ -0.18
RBFOX1-224ENST00000641259 ATP5J2-PTCD1G3V325 749 aa13.91□□□□□ -0.18
RBFOX1-224ENST00000641259 GRM8O00222 908 aa13.91□□□□□ -0.18
RBFOX1-224ENST00000641259 KMT5BQ4FZB7 885 aa13.91□□□□□ -0.18
RBFOX1-224ENST00000641259 ARHGAP29Q52LW3 1261 aa13.91□□□□□ -0.18
RBFOX1-224ENST00000641259 CNPY4Q8N129 248 aa13.91□□□□□ -0.18
RBFOX1-224ENST00000641259 METTL22Q9BUU2 404 aaPredicted RBP13.91□□□□□ -0.18
RBFOX1-224ENST00000641259 LRRCC1Q9C099 1032 aa13.91□□□□□ -0.18
RBFOX1-224ENST00000641259 SLIT2O94813 1529 aa13.91□□□□□ -0.18
RBFOX1-224ENST00000641259 UTYO14607 1347 aa13.91□□□□□ -0.18
RBFOX1-224ENST00000641259 DDX58O95786 925 aaKnown RBP13.91□□□□□ -0.18
RBFOX1-224ENST00000641259 BMS1Q14692 1282 aaKnown RBP13.91□□□□□ -0.18
RBFOX1-224ENST00000641259 EPHA10Q5JZY3 1008 aa13.91□□□□□ -0.18
RBFOX1-224ENST00000641259 LEKR1Q6ZMV7 388 aa13.91□□□□□ -0.18
RBFOX1-224ENST00000641259 TNMDQ9H2S6 317 aa13.91□□□□□ -0.18
RBFOX1-224ENST00000641259 PA2G4Q9UQ80 394 aaKnown RBP13.91□□□□□ -0.18
RBFOX1-224ENST00000641259 BCL9O00512 1426 aa13.9□□□□□ -0.18
RBFOX1-224ENST00000641259 BICC1Q9H694 974 aaKnown RBP13.9□□□□□ -0.18
RBFOX1-224ENST00000641259 FEZ2Q9UHY8 353 aaPredicted RBP13.9□□□□□ -0.18
RBFOX1-224ENST00000641259 PHACTR2O75167 634 aa13.9□□□□□ -0.18
RBFOX1-224ENST00000641259 SDSP20132 328 aa13.9□□□□□ -0.18
RBFOX1-224ENST00000641259 NOM1Q5C9Z4 860 aaKnown RBP13.9□□□□□ -0.18
RBFOX1-224ENST00000641259 WDR33Q9C0J8 1336 aaKnown RBP13.9□□□□□ -0.18
RBFOX1-224ENST00000641259 TJP1Q07157 1748 aa13.9□□□□□ -0.18
RBFOX1-224ENST00000641259 ERC2O15083 957 aa13.89□□□□□ -0.19
RBFOX1-224ENST00000641259 NRDCO43847 1150 aa13.89□□□□□ -0.19
RBFOX1-224ENST00000641259 TPM3P06753 285 aa13.89□□□□□ -0.19
RBFOX1-224ENST00000641259 PDE1AP54750 535 aa13.89□□□□□ -0.19
RBFOX1-224ENST00000641259 GCKRQ14397 625 aa13.89□□□□□ -0.19
RBFOX1-224ENST00000641259 TEX2Q8IWB9 1127 aa13.89□□□□□ -0.19
RBFOX1-224ENST00000641259 SURF6O75683 361 aaKnown RBP13.89□□□□□ -0.19
RBFOX1-224ENST00000641259 URI1O94763 535 aaPredicted RBP13.89□□□□□ -0.19
RBFOX1-224ENST00000641259 TPM4P67936 248 aa13.89□□□□□ -0.19
RBFOX1-224ENST00000641259 LRP6O75581 1613 aa13.89□□□□□ -0.19
RBFOX1-224ENST00000641259 NWD2Q9ULI1 1742 aa13.89□□□□□ -0.19
RBFOX1-224ENST00000641259 MX1P20591 662 aa13.89□□□□□ -0.19
RBFOX1-224ENST00000641259 DNM1Q05193 864 aaKnown RBP13.89□□□□□ -0.19
RBFOX1-224ENST00000641259 KCNF1Q9H3M0 494 aa13.89□□□□□ -0.19
RBFOX1-224ENST00000641259 PRR29P0C7W0 189 aa13.88□□□□□ -0.19
RBFOX1-224ENST00000641259 USP26Q9BXU7 913 aa13.88□□□□□ -0.19
RBFOX1-224ENST00000641259 EXOC5O00471 708 aa13.88□□□□□ -0.19
RBFOX1-224ENST00000641259 SKILP12757 684 aa13.88□□□□□ -0.19
RBFOX1-224ENST00000641259 MTX1Q13505 466 aa13.88□□□□□ -0.19
RBFOX1-224ENST00000641259 ARID5BQ14865 1188 aa13.88□□□□□ -0.19
RBFOX1-224ENST00000641259 ANO6Q4KMQ2 910 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms