RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 MCM6Q14566 821 aa16.04■□□□□ 0.16
SCARB2-227ENST00000640957 SSH2Q76I76 1423 aa16.04■□□□□ 0.16
SCARB2-227ENST00000640957 TULP2O00295 520 aa16.04■□□□□ 0.16
SCARB2-227ENST00000640957 GLRX3O76003 335 aaKnown RBP16.04■□□□□ 0.16
SCARB2-227ENST00000640957 H2AFXP16104 143 aaPredicted RBP16.04■□□□□ 0.16
SCARB2-227ENST00000640957 ZSCAN26Q16670 478 aa16.04■□□□□ 0.16
SCARB2-227ENST00000640957 FOXR1Q6PIV2 292 aa16.04■□□□□ 0.16
SCARB2-227ENST00000640957 Q6ZUG5 572 aa16.04■□□□□ 0.16
SCARB2-227ENST00000640957 CHPF2Q9P2E5 772 aa16.04■□□□□ 0.16
SCARB2-227ENST00000640957 A0A0G2JS52 829 aa16.04■□□□□ 0.16
SCARB2-227ENST00000640957 EVCP57679 992 aa16.04■□□□□ 0.16
SCARB2-227ENST00000640957 PDILTQ8N807 584 aa16.04■□□□□ 0.16
SCARB2-227ENST00000640957 LGR6Q9HBX8 967 aa16.04■□□□□ 0.16
SCARB2-227ENST00000640957 ZNF330Q9Y3S2 320 aaPredicted RBP16.04■□□□□ 0.16
SCARB2-227ENST00000640957 TMEM2Q9UHN6 1383 aa16.04■□□□□ 0.16
SCARB2-227ENST00000640957 USP32Q8NFA0 1604 aa16.03■□□□□ 0.16
SCARB2-227ENST00000640957 REREQ9P2R6 1566 aa16.03■□□□□ 0.16
SCARB2-227ENST00000640957 A0A0G2JLW4 131 aa16.03■□□□□ 0.16
SCARB2-227ENST00000640957 TTLL5Q6EMB2 1281 aa16.03■□□□□ 0.16
SCARB2-227ENST00000640957 ECHDC1Q9NTX5 307 aa16.03■□□□□ 0.16
SCARB2-227ENST00000640957 IRX3P78415 501 aaPredicted RBP16.02■□□□□ 0.16
SCARB2-227ENST00000640957 IL17REQ8NFR9 667 aa16.02■□□□□ 0.16
SCARB2-227ENST00000640957 DLG5Q8TDM6 1919 aa16.02■□□□□ 0.16
SCARB2-227ENST00000640957 CEP57L1Q8IYX8 460 aa16.02■□□□□ 0.16
SCARB2-227ENST00000640957 THEMISQ8N1K5 641 aaPredicted RBP16.02■□□□□ 0.16
SCARB2-227ENST00000640957 IRX2Q9BZI1 471 aaPredicted RBP16.02■□□□□ 0.16
SCARB2-227ENST00000640957 SUGCTQ9HAC7 445 aa16.02■□□□□ 0.16
SCARB2-227ENST00000640957 MYO1CO00159 1063 aa16.02■□□□□ 0.15
SCARB2-227ENST00000640957 SMC1AQ14683 1233 aaKnown RBP16.02■□□□□ 0.15
SCARB2-227ENST00000640957 SF3A1Q15459 793 aaKnown RBP16.02■□□□□ 0.15
SCARB2-227ENST00000640957 ZNF530Q6P9A1 599 aaPredicted RBP16.02■□□□□ 0.15
SCARB2-227ENST00000640957 MRFAP1L1Q96HT8 127 aa16.02■□□□□ 0.15
SCARB2-227ENST00000640957 ORC3Q9UBD5 711 aaPredicted RBP16.02■□□□□ 0.15
SCARB2-227ENST00000640957 CSB-PGBD3P0DP91 1061 aa16.01■□□□□ 0.15
SCARB2-227ENST00000640957 APOBRQ0VD83 1088 aa16.01■□□□□ 0.15
SCARB2-227ENST00000640957 KARSQ15046 597 aaKnown RBP16.01■□□□□ 0.15
SCARB2-227ENST00000640957 DPF2Q92785 391 aa16.01■□□□□ 0.15
SCARB2-227ENST00000640957 RABEP2Q9H5N1 569 aa16.01■□□□□ 0.15
SCARB2-227ENST00000640957 RPS6KB1P23443 525 aa16.01■□□□□ 0.15
SCARB2-227ENST00000640957 RESTQ13127 1097 aa16.01■□□□□ 0.15
SCARB2-227ENST00000640957 DDX17Q92841 729 aaKnown RBP16.01■□□□□ 0.15
SCARB2-227ENST00000640957 EAF2Q96CJ1 260 aaPredicted RBP16■□□□□ 0.15
SCARB2-227ENST00000640957 DESI2Q9BSY9 194 aa16■□□□□ 0.15
SCARB2-227ENST00000640957 RASSF4Q9H2L5 321 aa16■□□□□ 0.15
SCARB2-227ENST00000640957 RNF216Q9NWF9 866 aaPredicted RBP16■□□□□ 0.15
SCARB2-227ENST00000640957 FAM53CQ9NYF3 392 aa16■□□□□ 0.15
SCARB2-227ENST00000640957 ELP1O95163 1332 aa16■□□□□ 0.15
SCARB2-227ENST00000640957 TMEM131LA2VDJ0 1609 aa16■□□□□ 0.15
SCARB2-227ENST00000640957 NEURL4Q96JN8 1562 aa16■□□□□ 0.15
SCARB2-227ENST00000640957 GPHNQ9NQX3 736 aaPredicted RBP16■□□□□ 0.15
SCARB2-227ENST00000640957 PUF60Q9UHX1 559 aaKnown RBP16■□□□□ 0.15
SCARB2-227ENST00000640957 ATP7BP35670 1465 aa16■□□□□ 0.15
SCARB2-227ENST00000640957 CLTCQ00610 1675 aaKnown RBP15.99■□□□□ 0.15
SCARB2-227ENST00000640957 TMEM232C9JQI7 657 aa15.99■□□□□ 0.15
SCARB2-227ENST00000640957 MYL6BP14649 208 aa15.99■□□□□ 0.15
SCARB2-227ENST00000640957 NDUFA8P51970 172 aa15.99■□□□□ 0.15
SCARB2-227ENST00000640957 GNG11P61952 73 aa15.99■□□□□ 0.15
SCARB2-227ENST00000640957 SCRN1Q12765 414 aa15.99■□□□□ 0.15
SCARB2-227ENST00000640957 GPATCH11Q8N954 259 aa15.99■□□□□ 0.15
SCARB2-227ENST00000640957 ANO10Q9NW15 660 aa15.99■□□□□ 0.15
SCARB2-227ENST00000640957 BTBD11A6QL63 1104 aa15.99■□□□□ 0.15
SCARB2-227ENST00000640957 N4BP1O75113 896 aaKnown RBP15.99■□□□□ 0.15
SCARB2-227ENST00000640957 PSMA5P28066 241 aa15.99■□□□□ 0.15
SCARB2-227ENST00000640957 MARCKSP29966 332 aaPredicted RBP15.99■□□□□ 0.15
SCARB2-227ENST00000640957 SART3Q15020 963 aaKnown RBP15.99■□□□□ 0.15
SCARB2-227ENST00000640957 WDR24Q96S15 920 aa15.99■□□□□ 0.15
SCARB2-227ENST00000640957 ARGLU1Q9NWB6 273 aaPredicted RBP15.99■□□□□ 0.15
SCARB2-227ENST00000640957 VPS18Q9P253 973 aa15.99■□□□□ 0.15
SCARB2-227ENST00000640957 HOXC9P31274 260 aa15.99■□□□□ 0.15
SCARB2-227ENST00000640957 CFAP100Q494V2 611 aa15.99■□□□□ 0.15
SCARB2-227ENST00000640957 ORAI2Q96SN7 254 aa15.99■□□□□ 0.15
SCARB2-227ENST00000640957 HINFPQ9BQA5 517 aa15.99■□□□□ 0.15
SCARB2-227ENST00000640957 CRB1P82279 1406 aa15.99■□□□□ 0.15
SCARB2-227ENST00000640957 CPSF1Q10570 1443 aaKnown RBP15.99■□□□□ 0.15
SCARB2-227ENST00000640957 PREX1Q8TCU6 1659 aa15.98■□□□□ 0.15
SCARB2-227ENST00000640957 SERPINC1P01008 464 aa15.98■□□□□ 0.15
SCARB2-227ENST00000640957 C1orf141Q5JVX7 400 aa15.98■□□□□ 0.15
SCARB2-227ENST00000640957 MAP4K1Q92918 833 aa15.98■□□□□ 0.15
SCARB2-227ENST00000640957 PRAMEF22A3QJZ6 481 aa15.98■□□□□ 0.15
SCARB2-227ENST00000640957 TBC1D8O95759 1140 aa15.98■□□□□ 0.15
SCARB2-227ENST00000640957 E2F4Q16254 413 aa15.98■□□□□ 0.15
SCARB2-227ENST00000640957 DRC1Q96MC2 740 aa15.98■□□□□ 0.15
SCARB2-227ENST00000640957 PHF8Q9UPP1 1060 aa15.98■□□□□ 0.15
SCARB2-227ENST00000640957 ADCY9O60503 1353 aa15.97■□□□□ 0.15
SCARB2-227ENST00000640957 AATKQ6ZMQ8 1374 aa15.97■□□□□ 0.15
SCARB2-227ENST00000640957 H3BQF6 201 aa15.97■□□□□ 0.15
SCARB2-227ENST00000640957 RBM43Q6ZSC3 357 aaKnown RBP15.97■□□□□ 0.15
SCARB2-227ENST00000640957 LOC102724159A0A0B4J2E5 919 aa15.97■□□□□ 0.15
SCARB2-227ENST00000640957 ETF1P62495 437 aaKnown RBP15.97■□□□□ 0.15
SCARB2-227ENST00000640957 TPM4P67936 248 aa15.97■□□□□ 0.15
SCARB2-227ENST00000640957 PWP2Q15269 919 aaKnown RBP15.97■□□□□ 0.15
SCARB2-227ENST00000640957 NLRP2Q9NX02 1062 aa15.97■□□□□ 0.15
SCARB2-227ENST00000640957 CFAP45Q9UL16 551 aa15.97■□□□□ 0.15
SCARB2-227ENST00000640957 A0A0U1RQJ8 604 aa15.97■□□□□ 0.15
SCARB2-227ENST00000640957 PLEKHG3A1L390 1219 aa15.97■□□□□ 0.15
SCARB2-227ENST00000640957 SLC39A6Q13433 755 aa15.97■□□□□ 0.15
SCARB2-227ENST00000640957 ATRIPQ8WXE1 791 aa15.97■□□□□ 0.15
SCARB2-227ENST00000640957 FLT4P35916 1363 aa15.96■□□□□ 0.15
SCARB2-227ENST00000640957 NBPF6Q5VWK0 638 aa15.96■□□□□ 0.15
SCARB2-227ENST00000640957 NBPF4Q96M43 638 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms