RNA–Protein interactions for RNA: ENST00000640900.1

SCARB2-225, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-225ENST00000640900 CDC5LQ99459 802 aaKnown RBP11.33□□□□□ -0.6
SCARB2-225ENST00000640900 H0YIN7 160 aa11.32□□□□□ -0.6
SCARB2-225ENST00000640900 NPHP1O15259 732 aa11.32□□□□□ -0.6
SCARB2-225ENST00000640900 RAB11FIP3O75154 756 aa11.32□□□□□ -0.6
SCARB2-225ENST00000640900 SASH1O94885 1247 aa11.32□□□□□ -0.6
SCARB2-225ENST00000640900 CHRNA5P30532 468 aa11.32□□□□□ -0.6
SCARB2-225ENST00000640900 ALDH1B1P30837 517 aa11.32□□□□□ -0.6
SCARB2-225ENST00000640900 TMC4Q7Z404 712 aa11.32□□□□□ -0.6
SCARB2-225ENST00000640900 RBM17Q96I25 401 aaKnown RBP11.32□□□□□ -0.6
SCARB2-225ENST00000640900 CCDC85AQ96PX6 553 aaPredicted RBP11.32□□□□□ -0.6
SCARB2-225ENST00000640900 PUS3Q9BZE2 481 aaKnown RBP11.32□□□□□ -0.6
SCARB2-225ENST00000640900 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.32□□□□□ -0.6
SCARB2-225ENST00000640900 LTBP1Q14766 1721 aa11.32□□□□□ -0.6
SCARB2-225ENST00000640900 SURF6O75683 361 aaKnown RBP11.31□□□□□ -0.6
SCARB2-225ENST00000640900 DPEP1P16444 411 aa11.31□□□□□ -0.6
SCARB2-225ENST00000640900 IL15P40933 162 aaPredicted RBP11.31□□□□□ -0.6
SCARB2-225ENST00000640900 LRRC24Q50LG9 513 aa11.31□□□□□ -0.6
SCARB2-225ENST00000640900 HSP90AB4PQ58FF6 505 aa11.31□□□□□ -0.6
SCARB2-225ENST00000640900 B4GALNT3Q6L9W6 998 aa11.31□□□□□ -0.6
SCARB2-225ENST00000640900 LDHAL6AQ6ZMR3 332 aa11.31□□□□□ -0.6
SCARB2-225ENST00000640900 CENPQQ7L2Z9 268 aaPredicted RBP11.31□□□□□ -0.6
SCARB2-225ENST00000640900 ANKRD18AQ8IVF6 992 aa11.31□□□□□ -0.6
SCARB2-225ENST00000640900 RPGRQ92834 1020 aaKnown RBP11.31□□□□□ -0.6
SCARB2-225ENST00000640900 CCDC136Q96JN2 1154 aa11.31□□□□□ -0.6
SCARB2-225ENST00000640900 GPR108Q9NPR9 543 aa11.31□□□□□ -0.6
SCARB2-225ENST00000640900 MINPP1Q9UNW1 487 aa11.31□□□□□ -0.6
SCARB2-225ENST00000640900 CHMP3Q9Y3E7 222 aa11.31□□□□□ -0.6
SCARB2-225ENST00000640900 A0A1B0GUL6 1792 aa11.31□□□□□ -0.6
SCARB2-225ENST00000640900 SLX4Q8IY92 1834 aa11.3□□□□□ -0.6
SCARB2-225ENST00000640900 NUCB1Q02818 461 aa11.3□□□□□ -0.6
SCARB2-225ENST00000640900 ERC1Q8IUD2 1116 aa11.3□□□□□ -0.6
SCARB2-225ENST00000640900 SP8Q8IXZ3 490 aa11.3□□□□□ -0.6
SCARB2-225ENST00000640900 CNKSR1Q969H4 720 aa11.3□□□□□ -0.6
SCARB2-225ENST00000640900 EXOC6BQ9Y2D4 811 aa11.3□□□□□ -0.6
SCARB2-225ENST00000640900 ATP6V0A2Q9Y487 856 aa11.3□□□□□ -0.6
SCARB2-225ENST00000640900 IRS2Q9Y4H2 1338 aa11.3□□□□□ -0.6
SCARB2-225ENST00000640900 A0A0G2JLW4 131 aa11.29□□□□□ -0.6
SCARB2-225ENST00000640900 FGFR2P21802 821 aa11.29□□□□□ -0.6
SCARB2-225ENST00000640900 IGHMBP2P38935 993 aaKnown RBP11.29□□□□□ -0.6
SCARB2-225ENST00000640900 G3BP1Q13283 466 aaKnown RBP eCLIP11.29□□□□□ -0.6
SCARB2-225ENST00000640900 RHPN1Q8TCX5 695 aa11.29□□□□□ -0.6
SCARB2-225ENST00000640900 KIF1BPQ96EK5 621 aa11.29□□□□□ -0.6
SCARB2-225ENST00000640900 PODXL2Q9NZ53 605 aa11.29□□□□□ -0.6
SCARB2-225ENST00000640900 MROH5Q6ZUA9 1318 aa11.29□□□□□ -0.6
SCARB2-225ENST00000640900 SALL3Q9BXA9 1300 aa11.29□□□□□ -0.6
SCARB2-225ENST00000640900 PDE8BO95263 885 aa11.28□□□□□ -0.6
SCARB2-225ENST00000640900 CHRNDQ07001 517 aa11.28□□□□□ -0.6
SCARB2-225ENST00000640900 PRPF40BQ6NWY9 871 aaKnown RBP11.28□□□□□ -0.6
SCARB2-225ENST00000640900 SLC51AQ86UW1 340 aa11.28□□□□□ -0.6
SCARB2-225ENST00000640900 TTLL6Q8N841 843 aa11.28□□□□□ -0.6
SCARB2-225ENST00000640900 FHDC1Q9C0D6 1143 aaPredicted RBP11.28□□□□□ -0.6
SCARB2-225ENST00000640900 SIL1Q9H173 461 aa11.28□□□□□ -0.6
SCARB2-225ENST00000640900 SPEF2Q9C093 1822 aa11.28□□□□□ -0.6
SCARB2-225ENST00000640900 PPEF1O14829 653 aaPredicted RBP11.27□□□□□ -0.61
SCARB2-225ENST00000640900 TFCP2Q12800 502 aa11.27□□□□□ -0.61
SCARB2-225ENST00000640900 TAF7LQ5H9L4 462 aa11.27□□□□□ -0.61
SCARB2-225ENST00000640900 CC2D2BQ6DHV5 1058 aa11.27□□□□□ -0.61
SCARB2-225ENST00000640900 C15orf52Q6ZUT6 534 aaKnown RBP11.27□□□□□ -0.61
SCARB2-225ENST00000640900 NLGN2Q8NFZ4 835 aa11.27□□□□□ -0.61
SCARB2-225ENST00000640900 MPHOSPH8Q99549 860 aa11.27□□□□□ -0.61
SCARB2-225ENST00000640900 SYT17Q9BSW7 474 aa11.27□□□□□ -0.61
SCARB2-225ENST00000640900 RTFDC1Q9BY42 306 aaPredicted RBP11.27□□□□□ -0.61
SCARB2-225ENST00000640900 LRRCC1Q9C099 1032 aa11.27□□□□□ -0.61
SCARB2-225ENST00000640900 CNNM1Q9NRU3 951 aa11.27□□□□□ -0.61
SCARB2-225ENST00000640900 PIM2Q9P1W9 311 aa11.27□□□□□ -0.61
SCARB2-225ENST00000640900 CEP126Q9P2H0 1117 aa11.27□□□□□ -0.61
SCARB2-225ENST00000640900 DUOX1Q9NRD9 1551 aa11.27□□□□□ -0.61
SCARB2-225ENST00000640900 UBE4AQ14139 1066 aa11.26□□□□□ -0.61
SCARB2-225ENST00000640900 GRIPAP1Q4V328 841 aa11.26□□□□□ -0.61
SCARB2-225ENST00000640900 CHD1LQ86WJ1 897 aa11.26□□□□□ -0.61
SCARB2-225ENST00000640900 ZNF622Q969S3 477 aaKnown RBP eCLIP11.26□□□□□ -0.61
SCARB2-225ENST00000640900 EAF2Q96CJ1 260 aaPredicted RBP11.26□□□□□ -0.61
SCARB2-225ENST00000640900 ANKRD2Q9GZV1 360 aa11.26□□□□□ -0.61
SCARB2-225ENST00000640900 ZNF609O15014 1411 aa11.26□□□□□ -0.61
SCARB2-225ENST00000640900 ARFGEF1Q9Y6D6 1849 aa11.25□□□□□ -0.61
SCARB2-225ENST00000640900 TNNI3KQ59H18 835 aa11.25□□□□□ -0.61
SCARB2-225ENST00000640900 METTL24Q5JXM2 366 aa11.25□□□□□ -0.61
SCARB2-225ENST00000640900 ANKRD45Q5TZF3 282 aa11.25□□□□□ -0.61
SCARB2-225ENST00000640900 LEMD3Q9Y2U8 911 aa11.25□□□□□ -0.61
SCARB2-225ENST00000640900 FPGT-TNNI3KV9GXZ4 949 aa11.25□□□□□ -0.61
SCARB2-225ENST00000640900 ARAP2Q8WZ64 1704 aa11.25□□□□□ -0.61
SCARB2-225ENST00000640900 XDHP47989 1333 aa11.25□□□□□ -0.61
SCARB2-225ENST00000640900 WTIPA6NIX2 430 aaPredicted RBP11.24□□□□□ -0.61
SCARB2-225ENST00000640900 SMARCA5O60264 1052 aaPredicted RBP11.24□□□□□ -0.61
SCARB2-225ENST00000640900 PDE4AP27815 886 aa11.24□□□□□ -0.61
SCARB2-225ENST00000640900 GPSM2P81274 684 aa11.24□□□□□ -0.61
SCARB2-225ENST00000640900 PUM3Q15397 648 aaKnown RBP11.24□□□□□ -0.61
SCARB2-225ENST00000640900 DALRD3Q5D0E6 543 aaKnown RBP11.24□□□□□ -0.61
SCARB2-225ENST00000640900 OLFM4Q6UX06 510 aa11.24□□□□□ -0.61
SCARB2-225ENST00000640900 HELBQ8NG08 1087 aaPredicted RBP11.24□□□□□ -0.61
SCARB2-225ENST00000640900 LPIN2Q92539 896 aa11.24□□□□□ -0.61
SCARB2-225ENST00000640900 STAP2Q9UGK3 403 aa11.24□□□□□ -0.61
SCARB2-225ENST00000640900 AKAP2Q9Y2D5 859 aa11.24□□□□□ -0.61
SCARB2-225ENST00000640900 CACNA1SQ13698 1873 aa11.23□□□□□ -0.61
SCARB2-225ENST00000640900 SNAP23O00161 211 aa11.23□□□□□ -0.61
SCARB2-225ENST00000640900 TAF5LO75529 589 aa11.23□□□□□ -0.61
SCARB2-225ENST00000640900 ATP2B4P23634 1241 aa11.23□□□□□ -0.61
SCARB2-225ENST00000640900 TIMM10P62072 90 aa11.23□□□□□ -0.61
SCARB2-225ENST00000640900 OS9Q13438 667 aaPredicted RBP11.23□□□□□ -0.61
SCARB2-225ENST00000640900 SOGA3Q5TF21 947 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms