RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 RAC1P63000 192 aa9.54□□□□□ -0.88
CCDC7-216ENST00000640058 GDF6Q6KF10 455 aaPredicted RBP9.54□□□□□ -0.88
CCDC7-216ENST00000640058 WFDC8Q8IUA0 241 aa9.54□□□□□ -0.88
CCDC7-216ENST00000640058 RETREG2Q8NC44 543 aa9.54□□□□□ -0.88
CCDC7-216ENST00000640058 OR13H1Q8NG92 308 aa9.54□□□□□ -0.88
CCDC7-216ENST00000640058 TMEM63CQ9P1W3 806 aa9.54□□□□□ -0.88
CCDC7-216ENST00000640058 MTMR7Q9Y216 660 aa9.54□□□□□ -0.88
CCDC7-216ENST00000640058 PDGFAP04085 211 aa9.53□□□□□ -0.88
CCDC7-216ENST00000640058 C8orf34Q49A92 452 aa9.53□□□□□ -0.88
CCDC7-216ENST00000640058 ZNF438Q7Z4V0 828 aa9.53□□□□□ -0.88
CCDC7-216ENST00000640058 RBSNQ9H1K0 784 aa9.53□□□□□ -0.88
CCDC7-216ENST00000640058 ABI2Q9NYB9 513 aaPredicted RBP9.53□□□□□ -0.88
CCDC7-216ENST00000640058 HOXD8P13378 290 aaPredicted RBP9.52□□□□□ -0.89
CCDC7-216ENST00000640058 GGNBP2Q9H3C7 697 aa9.52□□□□□ -0.89
CCDC7-216ENST00000640058 ELP3Q9H9T3 547 aa9.52□□□□□ -0.89
CCDC7-216ENST00000640058 POLIQ9UNA4 740 aa9.52□□□□□ -0.89
CCDC7-216ENST00000640058 PCSK2P16519 638 aa9.51□□□□□ -0.89
CCDC7-216ENST00000640058 ATP11AP98196 1134 aa9.51□□□□□ -0.89
CCDC7-216ENST00000640058 HYAL2Q12891 473 aa9.51□□□□□ -0.89
CCDC7-216ENST00000640058 SHISA2Q6UWI4 295 aa9.51□□□□□ -0.89
CCDC7-216ENST00000640058 FMR1NBQ8N0W7 255 aaPredicted RBP9.51□□□□□ -0.89
CCDC7-216ENST00000640058 TTC16Q8NEE8 873 aa9.51□□□□□ -0.89
CCDC7-216ENST00000640058 KANSL3Q9P2N6 904 aa9.51□□□□□ -0.89
CCDC7-216ENST00000640058 TRIM33Q9UPN9 1127 aa9.51□□□□□ -0.89
CCDC7-216ENST00000640058 FURINP09958 794 aa9.5□□□□□ -0.89
CCDC7-216ENST00000640058 ELNP15502 786 aa9.5□□□□□ -0.89
CCDC7-216ENST00000640058 MZF1P28698 734 aaPredicted RBP9.5□□□□□ -0.89
CCDC7-216ENST00000640058 GATA4P43694 442 aa9.5□□□□□ -0.89
CCDC7-216ENST00000640058 SERPINB4P48594 390 aa9.5□□□□□ -0.89
CCDC7-216ENST00000640058 DOC2BQ14184 412 aa9.5□□□□□ -0.89
CCDC7-216ENST00000640058 SUZ12Q15022 739 aaKnown RBP9.5□□□□□ -0.89
CCDC7-216ENST00000640058 ALKBH2Q6NS38 261 aa9.5□□□□□ -0.89
CCDC7-216ENST00000640058 TTC9Q92623 222 aa9.5□□□□□ -0.89
CCDC7-216ENST00000640058 NACC1Q96RE7 527 aa9.5□□□□□ -0.89
CCDC7-216ENST00000640058 SELPP16109 830 aa9.49□□□□□ -0.89
CCDC7-216ENST00000640058 PDE12Q6L8Q7 609 aaKnown RBP9.49□□□□□ -0.89
CCDC7-216ENST00000640058 B4GALNT3Q6L9W6 998 aa9.49□□□□□ -0.89
CCDC7-216ENST00000640058 SPACA7Q96KW9 195 aa9.49□□□□□ -0.89
CCDC7-216ENST00000640058 CNTN3Q9P232 1028 aa9.49□□□□□ -0.89
CCDC7-216ENST00000640058 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.49□□□□□ -0.89
CCDC7-216ENST00000640058 FAM13AO94988 1023 aa9.48□□□□□ -0.89
CCDC7-216ENST00000640058 FKBP4Q02790 459 aaKnown RBP eCLIP9.48□□□□□ -0.89
CCDC7-216ENST00000640058 ILDR2Q71H61 639 aa9.48□□□□□ -0.89
CCDC7-216ENST00000640058 NCAPG2Q86XI2 1143 aa9.48□□□□□ -0.89
CCDC7-216ENST00000640058 RPLP1P05386 114 aaKnown RBP9.47□□□□□ -0.89
CCDC7-216ENST00000640058 SF3B2Q13435 895 aaKnown RBP9.47□□□□□ -0.89
CCDC7-216ENST00000640058 CEP135Q66GS9 1140 aa9.47□□□□□ -0.89
CCDC7-216ENST00000640058 IL22RA1Q8N6P7 574 aa9.47□□□□□ -0.89
CCDC7-216ENST00000640058 C1orf127Q8N9H9 656 aa9.47□□□□□ -0.89
CCDC7-216ENST00000640058 LACRTQ9GZZ8 138 aa9.47□□□□□ -0.89
CCDC7-216ENST00000640058 RASSF4Q9H2L5 321 aa9.47□□□□□ -0.89
CCDC7-216ENST00000640058 CCDC87Q9NVE4 849 aa9.47□□□□□ -0.89
CCDC7-216ENST00000640058 USP21Q9UK80 565 aa9.47□□□□□ -0.89
CCDC7-216ENST00000640058 H3BRB1 525 aa9.46□□□□□ -0.9
CCDC7-216ENST00000640058 NPR3P17342 541 aa9.46□□□□□ -0.9
CCDC7-216ENST00000640058 TUT1Q9H6E5 874 aaKnown RBP9.46□□□□□ -0.9
CCDC7-216ENST00000640058 C9orf172C9J069 976 aa9.45□□□□□ -0.9
CCDC7-216ENST00000640058 FZD6O60353 706 aa9.45□□□□□ -0.9
CCDC7-216ENST00000640058 ACPPP15309 386 aa9.45□□□□□ -0.9
CCDC7-216ENST00000640058 ADAM23O75077 832 aa9.44□□□□□ -0.9
CCDC7-216ENST00000640058 DEAF1O75398 565 aaPredicted RBP9.44□□□□□ -0.9
CCDC7-216ENST00000640058 KIF4AO95239 1232 aa9.44□□□□□ -0.9
CCDC7-216ENST00000640058 CES1P23141 567 aa9.44□□□□□ -0.9
CCDC7-216ENST00000640058 CDC25BP30305 580 aa9.44□□□□□ -0.9
CCDC7-216ENST00000640058 MBTPS1Q14703 1052 aa9.44□□□□□ -0.9
CCDC7-216ENST00000640058 XKR5Q6UX68 686 aa9.44□□□□□ -0.9
CCDC7-216ENST00000640058 FBXO11Q86XK2 927 aa9.44□□□□□ -0.9
CCDC7-216ENST00000640058 DTWD1Q8N5C7 304 aa9.44□□□□□ -0.9
CCDC7-216ENST00000640058 K7ELQ4 463 aaPredicted RBP9.43□□□□□ -0.9
CCDC7-216ENST00000640058 ICMTO60725 284 aa9.43□□□□□ -0.9
CCDC7-216ENST00000640058 SMNDC1O75940 238 aaKnown RBP eCLIP9.43□□□□□ -0.9
CCDC7-216ENST00000640058 ADGRE1Q14246 886 aa9.43□□□□□ -0.9
CCDC7-216ENST00000640058 TXNDC11Q6PKC3 985 aa9.43□□□□□ -0.9
CCDC7-216ENST00000640058 ADAMTSL4Q6UY14 1074 aa9.43□□□□□ -0.9
CCDC7-216ENST00000640058 GLYCTKQ8IVS8 523 aa9.43□□□□□ -0.9
CCDC7-216ENST00000640058 LENG1Q96BZ8 264 aaPredicted RBP9.43□□□□□ -0.9
CCDC7-216ENST00000640058 CHRDQ9H2X0 955 aa9.43□□□□□ -0.9
CCDC7-216ENST00000640058 TPSG1Q9NRR2 321 aa9.43□□□□□ -0.9
CCDC7-216ENST00000640058 FOXD3Q9UJU5 478 aaPredicted RBP9.43□□□□□ -0.9
CCDC7-216ENST00000640058 TRPA1O75762 1119 aa9.42□□□□□ -0.9
CCDC7-216ENST00000640058 CEP120Q8N960 986 aa9.42□□□□□ -0.9
CCDC7-216ENST00000640058 PBX4Q9BYU1 374 aa9.41□□□□□ -0.9
CCDC7-216ENST00000640058 EGFL7Q9UHF1 273 aa9.41□□□□□ -0.9
CCDC7-216ENST00000640058 SALL4Q9UJQ4 1053 aa9.41□□□□□ -0.9
CCDC7-216ENST00000640058 LINC01387J3KSC0 135 aa9.4□□□□□ -0.9
CCDC7-216ENST00000640058 EREGO14944 169 aa9.4□□□□□ -0.9
CCDC7-216ENST00000640058 PHACTR2O75167 634 aa9.4□□□□□ -0.9
CCDC7-216ENST00000640058 TNFRSF21O75509 655 aa9.4□□□□□ -0.9
CCDC7-216ENST00000640058 NRG1Q02297 640 aaPredicted RBP9.4□□□□□ -0.9
CCDC7-216ENST00000640058 TXNRD3Q86VQ6 643 aa9.4□□□□□ -0.9
CCDC7-216ENST00000640058 SH2B1Q9NRF2 756 aaPredicted RBP9.4□□□□□ -0.9
CCDC7-216ENST00000640058 PPME1Q9Y570 386 aa9.4□□□□□ -0.9
CCDC7-216ENST00000640058 CDC27P30260 824 aa9.39□□□□□ -0.91
CCDC7-216ENST00000640058 USP5P45974 858 aa9.39□□□□□ -0.91
CCDC7-216ENST00000640058 SETDB1Q15047 1291 aa9.39□□□□□ -0.91
CCDC7-216ENST00000640058 GJD3Q8N144 294 aa9.39□□□□□ -0.91
CCDC7-216ENST00000640058 HHIPQ96QV1 700 aa9.39□□□□□ -0.91
CCDC7-216ENST00000640058 POP1Q99575 1024 aaKnown RBP9.39□□□□□ -0.91
CCDC7-216ENST00000640058 SEMA6BQ9H3T3 888 aa9.39□□□□□ -0.91
CCDC7-216ENST00000640058 DLL1O00548 723 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms