RNA–Protein interactions for RNA: ENST00000639953.1

ATM-229, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-229ENST00000639953 M0R2N6 131 aa8.95□□□□□ -0.98
ATM-229ENST00000639953 FURINP09958 794 aa8.95□□□□□ -0.98
ATM-229ENST00000639953 CHRNA4P43681 627 aa8.95□□□□□ -0.98
ATM-229ENST00000639953 ELOA3BQ3SY89 546 aa8.95□□□□□ -0.98
ATM-229ENST00000639953 C1orf53Q5VUE5 145 aa8.95□□□□□ -0.98
ATM-229ENST00000639953 RAB44Q7Z6P3 723 aaPredicted RBP8.95□□□□□ -0.98
ATM-229ENST00000639953 PROSER2Q86WR7 435 aaPredicted RBP8.95□□□□□ -0.98
ATM-229ENST00000639953 SIX5Q8N196 739 aa8.95□□□□□ -0.98
ATM-229ENST00000639953 ELOA3Q8NG57 546 aa8.95□□□□□ -0.98
ATM-229ENST00000639953 CEP63Q96MT8 703 aa8.95□□□□□ -0.98
ATM-229ENST00000639953 MDFIQ99750 246 aa8.95□□□□□ -0.98
ATM-229ENST00000639953 PIK3R2O00459 728 aa8.94□□□□□ -0.98
ATM-229ENST00000639953 TMEM132AQ24JP5 1023 aa8.94□□□□□ -0.98
ATM-229ENST00000639953 POTEAQ6S8J7 498 aa8.94□□□□□ -0.98
ATM-229ENST00000639953 SCG3Q8WXD2 468 aaKnown RBP8.94□□□□□ -0.98
ATM-229ENST00000639953 SUSD3Q96L08 255 aa8.94□□□□□ -0.98
ATM-229ENST00000639953 AGLP35573 1532 aa8.94□□□□□ -0.98
ATM-229ENST00000639953 ALAS2P22557 587 aa8.93□□□□□ -0.98
ATM-229ENST00000639953 ITGAEP38570 1179 aa8.93□□□□□ -0.98
ATM-229ENST00000639953 ALDH16A1Q8IZ83 802 aa8.93□□□□□ -0.98
ATM-229ENST00000639953 BRD7Q9NPI1 651 aa8.93□□□□□ -0.98
ATM-229ENST00000639953 RRP7BPQ9NSQ0 103 aa8.93□□□□□ -0.98
ATM-229ENST00000639953 CHMP3Q9Y3E7 222 aa8.93□□□□□ -0.98
ATM-229ENST00000639953 RBM19Q9Y4C8 960 aaKnown RBP8.93□□□□□ -0.98
ATM-229ENST00000639953 MAFBQ9Y5Q3 323 aaPredicted RBP8.93□□□□□ -0.98
ATM-229ENST00000639953 GPC6Q9Y625 555 aaPredicted RBP8.93□□□□□ -0.98
ATM-229ENST00000639953 PTPRMP28827 1452 aa8.92□□□□□ -0.98
ATM-229ENST00000639953 SHANK2Q9UPX8 1470 aa8.92□□□□□ -0.98
ATM-229ENST00000639953 PTPRKQ15262 1439 aa8.92□□□□□ -0.98
ATM-229ENST00000639953 DHX29Q7Z478 1369 aaKnown RBP8.92□□□□□ -0.98
ATM-229ENST00000639953 SIN3BO75182 1162 aa8.92□□□□□ -0.98
ATM-229ENST00000639953 HIRAP54198 1017 aaPredicted RBP8.92□□□□□ -0.98
ATM-229ENST00000639953 SPEM2Q0P670 501 aa8.92□□□□□ -0.98
ATM-229ENST00000639953 GGT6Q6P531 493 aa8.92□□□□□ -0.98
ATM-229ENST00000639953 C8orf86Q6ZUL3 223 aa8.92□□□□□ -0.98
ATM-229ENST00000639953 NOP53Q9NZM5 478 aaKnown RBP8.92□□□□□ -0.98
ATM-229ENST00000639953 STARD13Q9Y3M8 1113 aa8.92□□□□□ -0.98
ATM-229ENST00000639953 SEC13P55735 322 aa8.91□□□□□ -0.98
ATM-229ENST00000639953 NGLY1Q96IV0 654 aa8.91□□□□□ -0.98
ATM-229ENST00000639953 HINFPQ9BQA5 517 aa8.91□□□□□ -0.98
ATM-229ENST00000639953 C2orf49Q9BVC5 232 aaPredicted RBP8.91□□□□□ -0.98
ATM-229ENST00000639953 ANKIB1Q9P2G1 1089 aa8.91□□□□□ -0.98
ATM-229ENST00000639953 CLTCQ00610 1675 aaKnown RBP8.91□□□□□ -0.98
ATM-229ENST00000639953 DHX57Q6P158 1386 aaKnown RBP8.9□□□□□ -0.98
ATM-229ENST00000639953 KIF15Q9NS87 1388 aa8.9□□□□□ -0.98
ATM-229ENST00000639953 ADARB2-AS1A8MUL3 147 aa8.9□□□□□ -0.98
ATM-229ENST00000639953 K7ELQ4 463 aaPredicted RBP8.9□□□□□ -0.98
ATM-229ENST00000639953 KIF3BO15066 747 aa8.9□□□□□ -0.98
ATM-229ENST00000639953 CEBPAP49715 358 aaPredicted RBP8.9□□□□□ -0.98
ATM-229ENST00000639953 CRTC2Q53ET0 693 aaPredicted RBP8.9□□□□□ -0.98
ATM-229ENST00000639953 CALR3Q96L12 384 aaKnown RBP8.9□□□□□ -0.98
ATM-229ENST00000639953 KCNH4Q9UQ05 1017 aa8.9□□□□□ -0.98
ATM-229ENST00000639953 C3P01024 1663 aa8.89□□□□□ -0.99
ATM-229ENST00000639953 M0R082 166 aa8.89□□□□□ -0.99
ATM-229ENST00000639953 TYRO3Q06418 890 aa8.89□□□□□ -0.99
ATM-229ENST00000639953 DPYDQ12882 1025 aa8.89□□□□□ -0.99
ATM-229ENST00000639953 COL9A3Q14050 684 aaPredicted RBP8.89□□□□□ -0.99
ATM-229ENST00000639953 LARP1Q6PKG0 1096 aaKnown RBP8.89□□□□□ -0.99
ATM-229ENST00000639953 ZNF417Q8TAU3 575 aa8.89□□□□□ -0.99
ATM-229ENST00000639953 TNFRSF25Q93038 417 aa8.89□□□□□ -0.99
ATM-229ENST00000639953 ZNF587Q96SQ5 575 aaPredicted RBP8.89□□□□□ -0.99
ATM-229ENST00000639953 PPP1R12CQ9BZL4 782 aa8.89□□□□□ -0.99
ATM-229ENST00000639953 DUOX2Q9NRD8 1548 aa8.89□□□□□ -0.99
ATM-229ENST00000639953 NCOA1Q15788 1441 aa8.88□□□□□ -0.99
ATM-229ENST00000639953 ANKRD30AQ9BXX3 1397 aa8.88□□□□□ -0.99
ATM-229ENST00000639953 ALBP02768 609 aa8.88□□□□□ -0.99
ATM-229ENST00000639953 KCNQ4P56696 695 aa8.88□□□□□ -0.99
ATM-229ENST00000639953 PTK7Q13308 1070 aa8.88□□□□□ -0.99
ATM-229ENST00000639953 DOC2BQ14184 412 aa8.88□□□□□ -0.99
ATM-229ENST00000639953 MICALL1Q8N3F8 863 aa8.88□□□□□ -0.99
ATM-229ENST00000639953 ADGRL2O95490 1459 aa8.88□□□□□ -0.99
ATM-229ENST00000639953 EIF2AK4Q9P2K8 1649 aaKnown RBP8.87□□□□□ -0.99
ATM-229ENST00000639953 LMOD1P29536 600 aaPredicted RBP8.87□□□□□ -0.99
ATM-229ENST00000639953 BTLAQ7Z6A9 289 aa8.87□□□□□ -0.99
ATM-229ENST00000639953 STAG2Q8N3U4 1231 aa8.87□□□□□ -0.99
ATM-229ENST00000639953 BHMTQ93088 406 aa8.87□□□□□ -0.99
ATM-229ENST00000639953 MROH1Q8NDA8 1641 aa8.87□□□□□ -0.99
ATM-229ENST00000639953 RNF17Q9BXT8 1623 aaKnown RBP8.87□□□□□ -0.99
ATM-229ENST00000639953 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.86□□□□□ -0.99
ATM-229ENST00000639953 CEP152O94986 1710 aa8.86□□□□□ -0.99
ATM-229ENST00000639953 MROH2AA6NES4 1674 aa8.86□□□□□ -0.99
ATM-229ENST00000639953 FAM229AH3BQW9 127 aa8.86□□□□□ -0.99
ATM-229ENST00000639953 ADH7P40394 386 aa8.86□□□□□ -0.99
ATM-229ENST00000639953 IGFLR1Q9H665 355 aa8.86□□□□□ -0.99
ATM-229ENST00000639953 A6NJR5 290 aa8.85□□□□□ -0.99
ATM-229ENST00000639953 BCS1LQ9Y276 419 aa8.85□□□□□ -0.99
ATM-229ENST00000639953 ERBINQ96RT1 1412 aa8.85□□□□□ -0.99
ATM-229ENST00000639953 SPATA31C1P0DKV0 1188 aa8.84□□□□□ -0.99
ATM-229ENST00000639953 TBC1D8BQ0IIM8 1120 aa8.84□□□□□ -0.99
ATM-229ENST00000639953 NEUROD1Q13562 356 aa8.84□□□□□ -0.99
ATM-229ENST00000639953 C20orf204Q6ZNR8 217 aa8.84□□□□□ -0.99
ATM-229ENST00000639953 ANKMY2Q8IV38 441 aa8.84□□□□□ -0.99
ATM-229ENST00000639953 VRTNQ9H8Y1 702 aa8.84□□□□□ -0.99
ATM-229ENST00000639953 KDM5DQ9BY66 1539 aa8.84□□□□□ -0.99
ATM-229ENST00000639953 ZMYM3Q14202 1370 aa8.84□□□□□ -0.99
ATM-229ENST00000639953 DEPDC5O75140 1603 aa8.83□□□□□ -1
ATM-229ENST00000639953 WASHC2CQ9Y4E1 1318 aa8.83□□□□□ -1
ATM-229ENST00000639953 CNTLNQ9NXG0 1405 aa8.83□□□□□ -1
ATM-229ENST00000639953 GATA4P43694 442 aa8.83□□□□□ -1
ATM-229ENST00000639953 CDCA8Q53HL2 280 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms