RNA–Protein interactions for RNA: ENST00000639673.1

TRIM43B-202, Transcript of tripartite motif containing 43B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM43B, Length 1,668 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43B-202ENST00000639673 MIER1Q8N108 512 aa12.63□□□□□ -0.39
TRIM43B-202ENST00000639673 MRPL50Q8N5N7 158 aaKnown RBP12.63□□□□□ -0.39
TRIM43B-202ENST00000639673 CDC5LQ99459 802 aaKnown RBP12.63□□□□□ -0.39
TRIM43B-202ENST00000639673 PLA2G12BQ9BX93 195 aa12.63□□□□□ -0.39
TRIM43B-202ENST00000639673 PODXL2Q9NZ53 605 aa12.63□□□□□ -0.39
TRIM43B-202ENST00000639673 ANKIB1Q9P2G1 1089 aa12.63□□□□□ -0.39
TRIM43B-202ENST00000639673 RTL9Q8NET4 1388 aa12.63□□□□□ -0.39
TRIM43B-202ENST00000639673 FAM161AQ3B820 660 aa12.62□□□□□ -0.39
TRIM43B-202ENST00000639673 CIAPIN1Q6FI81 312 aa12.62□□□□□ -0.39
TRIM43B-202ENST00000639673 EYA3Q99504 573 aa12.62□□□□□ -0.39
TRIM43B-202ENST00000639673 BCL2L13Q9BXK5 485 aa12.62□□□□□ -0.39
TRIM43B-202ENST00000639673 CLEC11AQ9Y240 323 aa12.62□□□□□ -0.39
TRIM43B-202ENST00000639673 ITGA6P23229 1130 aa12.61□□□□□ -0.39
TRIM43B-202ENST00000639673 GMPSP49915 693 aaPredicted RBP12.61□□□□□ -0.39
TRIM43B-202ENST00000639673 DOK7Q18PE1 504 aa12.61□□□□□ -0.39
TRIM43B-202ENST00000639673 PNMA8AQ86V59 439 aaPredicted RBP12.61□□□□□ -0.39
TRIM43B-202ENST00000639673 DNAJC5GQ8N7S2 189 aa12.61□□□□□ -0.39
TRIM43B-202ENST00000639673 SSH1Q8WYL5 1049 aa12.61□□□□□ -0.39
TRIM43B-202ENST00000639673 GGA1Q9UJY5 639 aa12.61□□□□□ -0.39
TRIM43B-202ENST00000639673 XDHP47989 1333 aa12.61□□□□□ -0.39
TRIM43B-202ENST00000639673 ECE2O60344 883 aa12.61□□□□□ -0.39
TRIM43B-202ENST00000639673 MAP1SQ66K74 1059 aaPredicted RBP12.61□□□□□ -0.39
TRIM43B-202ENST00000639673 TRMT2AQ8IZ69 625 aaKnown RBP12.61□□□□□ -0.39
TRIM43B-202ENST00000639673 BSDC1Q9NW68 430 aaPredicted RBP12.61□□□□□ -0.39
TRIM43B-202ENST00000639673 GPRC5DQ9NZD1 345 aa12.61□□□□□ -0.39
TRIM43B-202ENST00000639673 WTIPA6NIX2 430 aaPredicted RBP12.6□□□□□ -0.39
TRIM43B-202ENST00000639673 GRM8O00222 908 aa12.6□□□□□ -0.39
TRIM43B-202ENST00000639673 CSF1RP07333 972 aa12.6□□□□□ -0.39
TRIM43B-202ENST00000639673 ZC3H12CQ9C0D7 883 aaKnown RBP12.6□□□□□ -0.39
TRIM43B-202ENST00000639673 SRCIN1Q9C0H9 1055 aa12.6□□□□□ -0.39
TRIM43B-202ENST00000639673 KCNQ5Q9NR82 932 aa12.6□□□□□ -0.39
TRIM43B-202ENST00000639673 MINPP1Q9UNW1 487 aa12.6□□□□□ -0.39
TRIM43B-202ENST00000639673 ZBTB12Q9Y330 459 aaPredicted RBP12.6□□□□□ -0.39
TRIM43B-202ENST00000639673 PASKQ96RG2 1323 aa12.59□□□□□ -0.39
TRIM43B-202ENST00000639673 SHTN1A0MZ66 631 aa12.59□□□□□ -0.39
TRIM43B-202ENST00000639673 PSMD14O00487 310 aa12.59□□□□□ -0.39
TRIM43B-202ENST00000639673 IGHMBP2P38935 993 aaKnown RBP12.59□□□□□ -0.39
TRIM43B-202ENST00000639673 FOXO4P98177 505 aa12.59□□□□□ -0.39
TRIM43B-202ENST00000639673 TNIP1Q15025 636 aa12.59□□□□□ -0.39
TRIM43B-202ENST00000639673 EPHA10Q5JZY3 1008 aa12.59□□□□□ -0.39
TRIM43B-202ENST00000639673 C9orf78Q9NZ63 289 aaPredicted RBP12.59□□□□□ -0.39
TRIM43B-202ENST00000639673 CHMP3Q9Y3E7 222 aa12.59□□□□□ -0.39
TRIM43B-202ENST00000639673 ALDH1L1O75891 902 aa12.58□□□□□ -0.4
TRIM43B-202ENST00000639673 ITGBL1O95965 494 aaPredicted RBP12.58□□□□□ -0.4
TRIM43B-202ENST00000639673 ATP2B4P23634 1241 aa12.58□□□□□ -0.4
TRIM43B-202ENST00000639673 ADARB2Q9NS39 739 aaKnown RBP12.58□□□□□ -0.4
TRIM43B-202ENST00000639673 PTPRCP08575 1304 aa12.58□□□□□ -0.4
TRIM43B-202ENST00000639673 SCN9AQ15858 1988 aa12.58□□□□□ -0.4
TRIM43B-202ENST00000639673 ANKRD18BA2A2Z9 1011 aa12.57□□□□□ -0.4
TRIM43B-202ENST00000639673 USP50Q70EL3 339 aaPredicted RBP12.57□□□□□ -0.4
TRIM43B-202ENST00000639673 CNTROBQ8N137 903 aa12.57□□□□□ -0.4
TRIM43B-202ENST00000639673 KLRG1Q96E93 195 aa12.57□□□□□ -0.4
TRIM43B-202ENST00000639673 MPHOSPH8Q99549 860 aa12.57□□□□□ -0.4
TRIM43B-202ENST00000639673 SMC4Q9NTJ3 1288 aa12.57□□□□□ -0.4
TRIM43B-202ENST00000639673 G3V3G9 751 aa12.57□□□□□ -0.4
TRIM43B-202ENST00000639673 NBPF7P0C2Y1 421 aaPredicted RBP12.57□□□□□ -0.4
TRIM43B-202ENST00000639673 ALDH1L2Q3SY69 923 aa12.57□□□□□ -0.4
TRIM43B-202ENST00000639673 DCAF8Q5TAQ9 597 aa12.57□□□□□ -0.4
TRIM43B-202ENST00000639673 LMBR1LQ6UX01 489 aa12.57□□□□□ -0.4
TRIM43B-202ENST00000639673 SUCLG2Q96I99 432 aa12.57□□□□□ -0.4
TRIM43B-202ENST00000639673 CCT4P50991 539 aaKnown RBP12.56□□□□□ -0.4
TRIM43B-202ENST00000639673 IFIT5Q13325 482 aaKnown RBP12.56□□□□□ -0.4
TRIM43B-202ENST00000639673 MICALL2Q8IY33 904 aa12.56□□□□□ -0.4
TRIM43B-202ENST00000639673 TRPM4Q8TD43 1214 aa12.56□□□□□ -0.4
TRIM43B-202ENST00000639673 CREBZFQ9NS37 354 aa12.56□□□□□ -0.4
TRIM43B-202ENST00000639673 CNOT7Q9UIV1 285 aaKnown RBP12.56□□□□□ -0.4
TRIM43B-202ENST00000639673 MED23Q9ULK4 1368 aa12.56□□□□□ -0.4
TRIM43B-202ENST00000639673 KLRK1P26718 216 aa12.55□□□□□ -0.4
TRIM43B-202ENST00000639673 HIRAP54198 1017 aaPredicted RBP12.55□□□□□ -0.4
TRIM43B-202ENST00000639673 FMR1Q06787 632 aaKnown RBP eCLIP12.55□□□□□ -0.4
TRIM43B-202ENST00000639673 CHRNDQ07001 517 aa12.55□□□□□ -0.4
TRIM43B-202ENST00000639673 KAZALD1Q96I82 304 aa12.55□□□□□ -0.4
TRIM43B-202ENST00000639673 ZNF594Q96JF6 807 aaPredicted RBP12.55□□□□□ -0.4
TRIM43B-202ENST00000639673 TXNRD3Q86VQ6 643 aa12.54□□□□□ -0.4
TRIM43B-202ENST00000639673 A0A1B0GUL6 1792 aa12.54□□□□□ -0.4
TRIM43B-202ENST00000639673 ZNF804BA4D1E1 1349 aa12.54□□□□□ -0.4
TRIM43B-202ENST00000639673 UTYO14607 1347 aa12.54□□□□□ -0.4
TRIM43B-202ENST00000639673 H7C1D1 291 aa12.54□□□□□ -0.4
TRIM43B-202ENST00000639673 SNAP23O00161 211 aa12.54□□□□□ -0.4
TRIM43B-202ENST00000639673 TAF5LO75529 589 aa12.54□□□□□ -0.4
TRIM43B-202ENST00000639673 EGFRP00533 1210 aa12.54□□□□□ -0.4
TRIM43B-202ENST00000639673 VIL1P09327 827 aaKnown RBP12.54□□□□□ -0.4
TRIM43B-202ENST00000639673 CT47B1P0C2W7 299 aaPredicted RBP12.54□□□□□ -0.4
TRIM43B-202ENST00000639673 CCDC57Q2TAC2 916 aa12.54□□□□□ -0.4
TRIM43B-202ENST00000639673 SAMD7Q7Z3H4 446 aa12.54□□□□□ -0.4
TRIM43B-202ENST00000639673 DPF2Q92785 391 aa12.54□□□□□ -0.4
TRIM43B-202ENST00000639673 ANKRD2Q9GZV1 360 aa12.54□□□□□ -0.4
TRIM43B-202ENST00000639673 MKRN1Q9UHC7 482 aaKnown RBP12.54□□□□□ -0.4
TRIM43B-202ENST00000639673 NOB1Q9ULX3 412 aaKnown RBP12.54□□□□□ -0.4
TRIM43B-202ENST00000639673 LEMD3Q9Y2U8 911 aa12.54□□□□□ -0.4
TRIM43B-202ENST00000639673 TMEM88BA6NKF7 163 aa12.53□□□□□ -0.4
TRIM43B-202ENST00000639673 TRAF5O00463 557 aa12.53□□□□□ -0.4
TRIM43B-202ENST00000639673 RPS12P25398 132 aaKnown RBP12.53□□□□□ -0.4
TRIM43B-202ENST00000639673 HNRNPUQ00839 825 aaKnown RBP eCLIP12.53□□□□□ -0.4
TRIM43B-202ENST00000639673 TBC1D10BQ4KMP7 808 aaPredicted RBP12.53□□□□□ -0.4
TRIM43B-202ENST00000639673 TAF7LQ5H9L4 462 aa12.53□□□□□ -0.4
TRIM43B-202ENST00000639673 HELBQ8NG08 1087 aaPredicted RBP12.53□□□□□ -0.4
TRIM43B-202ENST00000639673 BICC1Q9H694 974 aaKnown RBP12.53□□□□□ -0.4
TRIM43B-202ENST00000639673 PSME4Q14997 1843 aa12.53□□□□□ -0.4
TRIM43B-202ENST00000639673 KCNJ4P48050 445 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms