RNA–Protein interactions for RNA: ENST00000639658.1

POLR2B-213, Transcript of RNA polymerase II subunit B, humanhuman

TSL 5 BASIC

Gene POLR2B, Length 3,300 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-213ENST00000639658 MPHOSPH10O00566 681 aaKnown RBP6.56□□□□□ -1.36
POLR2B-213ENST00000639658 SYT1P21579 422 aa6.56□□□□□ -1.36
POLR2B-213ENST00000639658 PDIA5Q14554 519 aa6.56□□□□□ -1.36
POLR2B-213ENST00000639658 BEND6Q5SZJ8 279 aaPredicted RBP6.56□□□□□ -1.36
POLR2B-213ENST00000639658 GORABQ5T7V8 394 aa6.56□□□□□ -1.36
POLR2B-213ENST00000639658 VPS53Q5VIR6 699 aa6.56□□□□□ -1.36
POLR2B-213ENST00000639658 TAX1BP1Q86VP1 789 aa6.56□□□□□ -1.36
POLR2B-213ENST00000639658 TEX11Q8IYF3 940 aa6.56□□□□□ -1.36
POLR2B-213ENST00000639658 CALR3Q96L12 384 aaKnown RBP6.56□□□□□ -1.36
POLR2B-213ENST00000639658 ZSCAN31Q96LW9 406 aaPredicted RBP6.56□□□□□ -1.36
POLR2B-213ENST00000639658 LARP6Q9BRS8 491 aaKnown RBP6.56□□□□□ -1.36
POLR2B-213ENST00000639658 MRFAP1Q9Y605 127 aa6.56□□□□□ -1.36
POLR2B-213ENST00000639658 CASZ1Q86V15 1759 aa6.56□□□□□ -1.36
POLR2B-213ENST00000639658 CCDC69A6NI79 296 aa6.56□□□□□ -1.36
POLR2B-213ENST00000639658 SASH1O94885 1247 aa6.56□□□□□ -1.36
POLR2B-213ENST00000639658 HNRNPH1P31943 449 aaKnown RBP6.56□□□□□ -1.36
POLR2B-213ENST00000639658 FNTAP49354 379 aa6.56□□□□□ -1.36
POLR2B-213ENST00000639658 NEK4P51957 841 aa6.56□□□□□ -1.36
POLR2B-213ENST00000639658 RWDD2BP57060 319 aa6.56□□□□□ -1.36
POLR2B-213ENST00000639658 GNAI1P63096 354 aa6.56□□□□□ -1.36
POLR2B-213ENST00000639658 PDCD2Q16342 344 aaPredicted RBP6.56□□□□□ -1.36
POLR2B-213ENST00000639658 EMC10Q5UCC4 262 aa6.56□□□□□ -1.36
POLR2B-213ENST00000639658 MAB21L3Q8N8X9 362 aa6.56□□□□□ -1.36
POLR2B-213ENST00000639658 SH3GL3Q99963 347 aa6.56□□□□□ -1.36
POLR2B-213ENST00000639658 MMTAG2Q9BU76 263 aaKnown RBP6.56□□□□□ -1.36
POLR2B-213ENST00000639658 SCAND2PQ9GZW5 306 aaPredicted RBP6.56□□□□□ -1.36
POLR2B-213ENST00000639658 TMX4Q9H1E5 349 aaPredicted RBP6.56□□□□□ -1.36
POLR2B-213ENST00000639658 NUB1Q9Y5A7 615 aa6.56□□□□□ -1.36
POLR2B-213ENST00000639658 VAMP4O75379 141 aa6.56□□□□□ -1.36
POLR2B-213ENST00000639658 TSPY4P0CV99 314 aa6.56□□□□□ -1.36
POLR2B-213ENST00000639658 TSPY10P0CW01 314 aa6.56□□□□□ -1.36
POLR2B-213ENST00000639658 TXLNAP40222 546 aa6.56□□□□□ -1.36
POLR2B-213ENST00000639658 SLC8A3P57103 927 aa6.56□□□□□ -1.36
POLR2B-213ENST00000639658 BIRC2Q13490 618 aa6.56□□□□□ -1.36
POLR2B-213ENST00000639658 SPC24Q8NBT2 197 aa6.56□□□□□ -1.36
POLR2B-213ENST00000639658 TCP11Q8WWU5 503 aa6.56□□□□□ -1.36
POLR2B-213ENST00000639658 L1RE1Q9UN81 338 aa6.56□□□□□ -1.36
POLR2B-213ENST00000639658 TBC1D2BQ9UPU7 963 aa6.56□□□□□ -1.36
POLR2B-213ENST00000639658 ELF1P32519 619 aa6.55□□□□□ -1.36
POLR2B-213ENST00000639658 ANO6Q4KMQ2 910 aa6.55□□□□□ -1.36
POLR2B-213ENST00000639658 ATL3Q6DD88 541 aa6.55□□□□□ -1.36
POLR2B-213ENST00000639658 HDXQ7Z353 690 aa6.55□□□□□ -1.36
POLR2B-213ENST00000639658 HOMER3Q9NSC5 361 aa6.55□□□□□ -1.36
POLR2B-213ENST00000639658 SOS1Q07889 1333 aaPredicted RBP6.55□□□□□ -1.36
POLR2B-213ENST00000639658 CAMSAP1Q5T5Y3 1602 aa6.55□□□□□ -1.36
POLR2B-213ENST00000639658 DIP2AQ14689 1571 aa6.55□□□□□ -1.36
POLR2B-213ENST00000639658 UGGT1Q9NYU2 1555 aa6.55□□□□□ -1.36
POLR2B-213ENST00000639658 PRPF6O94906 941 aaKnown RBP6.55□□□□□ -1.36
POLR2B-213ENST00000639658 GNAI3P08754 354 aa6.55□□□□□ -1.36
POLR2B-213ENST00000639658 LMNB2Q03252 620 aa6.55□□□□□ -1.36
POLR2B-213ENST00000639658 DRP2Q13474 957 aa6.55□□□□□ -1.36
POLR2B-213ENST00000639658 TTLL5Q6EMB2 1281 aa6.55□□□□□ -1.36
POLR2B-213ENST00000639658 LUZP1Q86V48 1076 aa6.55□□□□□ -1.36
POLR2B-213ENST00000639658 RUBCNQ92622 972 aa6.55□□□□□ -1.36
POLR2B-213ENST00000639658 KAT2BQ92831 832 aa6.55□□□□□ -1.36
POLR2B-213ENST00000639658 CHAMP1Q96JM3 812 aa6.55□□□□□ -1.36
POLR2B-213ENST00000639658 BCL2L13Q9BXK5 485 aa6.55□□□□□ -1.36
POLR2B-213ENST00000639658 SNRKQ9NRH2 765 aa6.55□□□□□ -1.36
POLR2B-213ENST00000639658 FAM208AQ9UK61 1670 aaKnown RBP6.55□□□□□ -1.36
POLR2B-213ENST00000639658 OVOS2A0A0G2JMS6 1433 aa6.55□□□□□ -1.36
POLR2B-213ENST00000639658 OVOS2A0A0J9YW53 1432 aa6.55□□□□□ -1.36
POLR2B-213ENST00000639658 OVOS2Q6IE36 1432 aa6.55□□□□□ -1.36
POLR2B-213ENST00000639658 JCADQ9P266 1359 aa6.55□□□□□ -1.36
POLR2B-213ENST00000639658 AMPHP49418 695 aa6.55□□□□□ -1.36
POLR2B-213ENST00000639658 LONRF2Q1L5Z9 754 aa6.55□□□□□ -1.36
POLR2B-213ENST00000639658 WDR93Q6P2C0 686 aa6.55□□□□□ -1.36
POLR2B-213ENST00000639658 TLDC1Q6P9B6 456 aa6.55□□□□□ -1.36
POLR2B-213ENST00000639658 DHX40Q8IX18 779 aaKnown RBP6.55□□□□□ -1.36
POLR2B-213ENST00000639658 CTCFLQ8NI51 663 aaPredicted RBP6.55□□□□□ -1.36
POLR2B-213ENST00000639658 CCDC26Q8TAB7 109 aa6.55□□□□□ -1.36
POLR2B-213ENST00000639658 DNAAF4Q8WXU2 420 aa6.55□□□□□ -1.36
POLR2B-213ENST00000639658 TRIM5Q9C035 493 aa6.55□□□□□ -1.36
POLR2B-213ENST00000639658 AKAP2Q9Y2D5 859 aa6.55□□□□□ -1.36
POLR2B-213ENST00000639658 TSPOAP1O95153 1857 aa6.54□□□□□ -1.36
POLR2B-213ENST00000639658 LRRC37A3O60309 1634 aa6.54□□□□□ -1.36
POLR2B-213ENST00000639658 USP42Q9H9J4 1324 aaKnown RBP6.54□□□□□ -1.36
POLR2B-213ENST00000639658 CHUKO15111 745 aa6.54□□□□□ -1.36
POLR2B-213ENST00000639658 PRPHP41219 470 aa6.54□□□□□ -1.36
POLR2B-213ENST00000639658 STX1AQ16623 288 aa6.54□□□□□ -1.36
POLR2B-213ENST00000639658 RCSD1Q6JBY9 416 aa6.54□□□□□ -1.36
POLR2B-213ENST00000639658 RINLQ6ZS11 566 aa6.54□□□□□ -1.36
POLR2B-213ENST00000639658 GBP3Q9H0R5 595 aa6.54□□□□□ -1.36
POLR2B-213ENST00000639658 LIMCH1Q9UPQ0 1083 aa6.54□□□□□ -1.36
POLR2B-213ENST00000639658 SMC3Q9UQE7 1217 aa6.54□□□□□ -1.36
POLR2B-213ENST00000639658 ERCC6L2Q5T890 1561 aa6.54□□□□□ -1.36
POLR2B-213ENST00000639658 ZFYVE16Q7Z3T8 1539 aa6.54□□□□□ -1.36
POLR2B-213ENST00000639658 DDX60Q8IY21 1712 aaKnown RBP6.54□□□□□ -1.36
POLR2B-213ENST00000639658 PPFIA2O75334 1257 aa6.54□□□□□ -1.36
POLR2B-213ENST00000639658 ERLIN2O94905 339 aa6.54□□□□□ -1.36
POLR2B-213ENST00000639658 ZNF165P49910 485 aa6.54□□□□□ -1.36
POLR2B-213ENST00000639658 KRT85P78386 507 aa6.54□□□□□ -1.36
POLR2B-213ENST00000639658 SART3Q15020 963 aaKnown RBP6.54□□□□□ -1.36
POLR2B-213ENST00000639658 HSP90AB4PQ58FF6 505 aa6.54□□□□□ -1.36
POLR2B-213ENST00000639658 CEP85Q6P2H3 762 aa6.54□□□□□ -1.36
POLR2B-213ENST00000639658 DRAXINQ8NBI3 349 aaPredicted RBP6.54□□□□□ -1.36
POLR2B-213ENST00000639658 LRRN4CLQ8ND94 238 aa6.54□□□□□ -1.36
POLR2B-213ENST00000639658 SNRNP27Q8WVK2 155 aaKnown RBP6.54□□□□□ -1.36
POLR2B-213ENST00000639658 KIFC2Q96AC6 838 aa6.54□□□□□ -1.36
POLR2B-213ENST00000639658 SUDS3Q9H7L9 328 aaPredicted RBP6.54□□□□□ -1.36
POLR2B-213ENST00000639658 PDLIM1O00151 329 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms