RNA–Protein interactions for RNA: ENST00000639561.1

ATRIP-208, Transcript of ATR interacting protein, humanhuman

TSL 2

Gene ATRIP, Length 2,376 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIP-208ENST00000639561 NIP7Q9Y221 180 aaKnown RBP eCLIP16.83■□□□□ 0.28
ATRIP-208ENST00000639561 GSE1Q14687 1217 aa16.82■□□□□ 0.28
ATRIP-208ENST00000639561 TTLL7Q6ZT98 887 aa16.82■□□□□ 0.28
ATRIP-208ENST00000639561 UBE3BQ7Z3V4 1068 aa16.82■□□□□ 0.28
ATRIP-208ENST00000639561 SIL1Q9H173 461 aa16.82■□□□□ 0.28
ATRIP-208ENST00000639561 CACNA1SQ13698 1873 aa16.82■□□□□ 0.28
ATRIP-208ENST00000639561 HSP90AA1P07900 732 aaKnown RBP16.82■□□□□ 0.28
ATRIP-208ENST00000639561 ZNF622Q969S3 477 aaKnown RBP eCLIP16.82■□□□□ 0.28
ATRIP-208ENST00000639561 PALD1Q9ULE6 856 aa16.82■□□□□ 0.28
ATRIP-208ENST00000639561 MAP3K15Q6ZN16 1313 aa16.81■□□□□ 0.28
ATRIP-208ENST00000639561 GLRX3O76003 335 aaKnown RBP16.81■□□□□ 0.28
ATRIP-208ENST00000639561 TPTE2Q6XPS3 522 aa16.81■□□□□ 0.28
ATRIP-208ENST00000639561 AACSQ86V21 672 aa16.81■□□□□ 0.28
ATRIP-208ENST00000639561 CASP7P55210 303 aa16.81■□□□□ 0.28
ATRIP-208ENST00000639561 G3BP1Q13283 466 aaKnown RBP eCLIP16.81■□□□□ 0.28
ATRIP-208ENST00000639561 STYK1Q6J9G0 422 aa16.81■□□□□ 0.28
ATRIP-208ENST00000639561 CNTROBQ8N137 903 aa16.81■□□□□ 0.28
ATRIP-208ENST00000639561 CNKSR1Q969H4 720 aa16.81■□□□□ 0.28
ATRIP-208ENST00000639561 EAF2Q96CJ1 260 aaPredicted RBP16.81■□□□□ 0.28
ATRIP-208ENST00000639561 ECHDC1Q9NTX5 307 aa16.81■□□□□ 0.28
ATRIP-208ENST00000639561 RNF181Q9P0P0 153 aa16.81■□□□□ 0.28
ATRIP-208ENST00000639561 CIZ1Q9ULV3 898 aaPredicted RBP16.81■□□□□ 0.28
ATRIP-208ENST00000639561 ZC3H4Q9UPT8 1303 aaKnown RBP16.8■□□□□ 0.28
ATRIP-208ENST00000639561 IFIT2P09913 472 aaKnown RBP16.8■□□□□ 0.28
ATRIP-208ENST00000639561 MCM4P33991 863 aa16.8■□□□□ 0.28
ATRIP-208ENST00000639561 CCDC24Q8N4L8 307 aa16.8■□□□□ 0.28
ATRIP-208ENST00000639561 RABL6Q3YEC7 729 aaPredicted RBP16.8■□□□□ 0.28
ATRIP-208ENST00000639561 CCDC88AQ3V6T2 1871 aa16.8■□□□□ 0.28
ATRIP-208ENST00000639561 RFX5P48382 616 aaPredicted RBP16.79■□□□□ 0.28
ATRIP-208ENST00000639561 HLFQ16534 295 aa16.79■□□□□ 0.28
ATRIP-208ENST00000639561 FER1L6Q2WGJ9 1857 aa16.79■□□□□ 0.28
ATRIP-208ENST00000639561 MASTLQ96GX5 879 aa16.79■□□□□ 0.28
ATRIP-208ENST00000639561 NYXQ9GZU5 481 aa16.79■□□□□ 0.28
ATRIP-208ENST00000639561 TLR7Q9NYK1 1049 aaKnown RBP16.79■□□□□ 0.28
ATRIP-208ENST00000639561 SGSM2O43147 1006 aa16.79■□□□□ 0.28
ATRIP-208ENST00000639561 ST18O60284 1047 aa16.79■□□□□ 0.28
ATRIP-208ENST00000639561 TIAM2Q8IVF5 1701 aa16.78■□□□□ 0.28
ATRIP-208ENST00000639561 TNRC6CQ9HCJ0 1690 aaKnown RBP16.78■□□□□ 0.28
ATRIP-208ENST00000639561 SRGNP10124 158 aa16.78■□□□□ 0.28
ATRIP-208ENST00000639561 RAB3GAP1Q15042 981 aa16.78■□□□□ 0.28
ATRIP-208ENST00000639561 CCDC8Q9H0W5 538 aaPredicted RBP16.78■□□□□ 0.28
ATRIP-208ENST00000639561 LMNB1P20700 586 aa16.78■□□□□ 0.28
ATRIP-208ENST00000639561 GTF2E1P29083 439 aaPredicted RBP16.78■□□□□ 0.28
ATRIP-208ENST00000639561 RASSF7Q02833 373 aa16.78■□□□□ 0.28
ATRIP-208ENST00000639561 PTPN12Q05209 780 aaKnown RBP16.78■□□□□ 0.28
ATRIP-208ENST00000639561 SOGA3Q5TF21 947 aa16.78■□□□□ 0.28
ATRIP-208ENST00000639561 TNPO1Q92973 898 aaKnown RBP16.78■□□□□ 0.28
ATRIP-208ENST00000639561 GPATCH3Q96I76 525 aa16.78■□□□□ 0.28
ATRIP-208ENST00000639561 COPRSQ9NQ92 184 aa16.78■□□□□ 0.28
ATRIP-208ENST00000639561 SLX4Q8IY92 1834 aa16.77■□□□□ 0.28
ATRIP-208ENST00000639561 ZBTB3Q9H5J0 574 aa16.77■□□□□ 0.28
ATRIP-208ENST00000639561 DICER1Q9UPY3 1922 aaKnown RBP16.77■□□□□ 0.27
ATRIP-208ENST00000639561 ANKRD36CQ5JPF3 1778 aa16.77■□□□□ 0.27
ATRIP-208ENST00000639561 NPR1P16066 1061 aa16.77■□□□□ 0.27
ATRIP-208ENST00000639561 ANAPC15P60006 121 aa16.77■□□□□ 0.27
ATRIP-208ENST00000639561 IL17RAQ96F46 866 aa16.77■□□□□ 0.27
ATRIP-208ENST00000639561 H7C1W4 665 aa16.76■□□□□ 0.27
ATRIP-208ENST00000639561 KIF3CO14782 793 aa16.76■□□□□ 0.27
ATRIP-208ENST00000639561 MCCP23508 829 aa16.76■□□□□ 0.27
ATRIP-208ENST00000639561 NEK4P51957 841 aa16.76■□□□□ 0.27
ATRIP-208ENST00000639561 CWC27Q6UX04 472 aaKnown RBP16.76■□□□□ 0.27
ATRIP-208ENST00000639561 RIC1Q4ADV7 1423 aa16.76■□□□□ 0.27
ATRIP-208ENST00000639561 RAD50Q92878 1312 aa16.76■□□□□ 0.27
ATRIP-208ENST00000639561 KLRG2A4D1S0 409 aaPredicted RBP16.75■□□□□ 0.27
ATRIP-208ENST00000639561 FAM177BA6PVY3 158 aa16.75■□□□□ 0.27
ATRIP-208ENST00000639561 EPB41L2O43491 1005 aaKnown RBP16.75■□□□□ 0.27
ATRIP-208ENST00000639561 C21orf2O43822 256 aa16.75■□□□□ 0.27
ATRIP-208ENST00000639561 HSPA4P34932 840 aa16.75■□□□□ 0.27
ATRIP-208ENST00000639561 PRPF40BQ6NWY9 871 aaKnown RBP16.75■□□□□ 0.27
ATRIP-208ENST00000639561 GIGYF2Q6Y7W6 1299 aaKnown RBP16.75■□□□□ 0.27
ATRIP-208ENST00000639561 LSG1Q9H089 658 aaKnown RBP16.75■□□□□ 0.27
ATRIP-208ENST00000639561 NFKBIEO00221 500 aa16.74■□□□□ 0.27
ATRIP-208ENST00000639561 FOXO4P98177 505 aa16.74■□□□□ 0.27
ATRIP-208ENST00000639561 CWC25Q9NXE8 425 aaPredicted RBP16.74■□□□□ 0.27
ATRIP-208ENST00000639561 LTBP3Q9NS15 1303 aa16.74■□□□□ 0.27
ATRIP-208ENST00000639561 LMBR1LQ6UX01 489 aa16.74■□□□□ 0.27
ATRIP-208ENST00000639561 PARP10Q53GL7 1025 aa16.73■□□□□ 0.27
ATRIP-208ENST00000639561 ZNF34Q8IZ26 560 aa16.73■□□□□ 0.27
ATRIP-208ENST00000639561 ZGPATQ8N5A5 531 aaKnown RBP16.73■□□□□ 0.27
ATRIP-208ENST00000639561 EVI5LQ96CN4 794 aa16.73■□□□□ 0.27
ATRIP-208ENST00000639561 DIAPH3Q9NSV4 1193 aa16.73■□□□□ 0.27
ATRIP-208ENST00000639561 ZNF219Q9P2Y4 722 aaPredicted RBP16.73■□□□□ 0.27
ATRIP-208ENST00000639561 GPTP24298 496 aa16.72■□□□□ 0.27
ATRIP-208ENST00000639561 TFCP2Q12800 502 aa16.72■□□□□ 0.27
ATRIP-208ENST00000639561 HSP90AB3PQ58FF7 597 aa16.72■□□□□ 0.27
ATRIP-208ENST00000639561 TAOK3Q9H2K8 898 aa16.72■□□□□ 0.27
ATRIP-208ENST00000639561 ALDH1B1P30837 517 aa16.72■□□□□ 0.27
ATRIP-208ENST00000639561 CCDC191Q8NCU4 936 aa16.72■□□□□ 0.27
ATRIP-208ENST00000639561 UPF3BQ9BZI7 483 aaKnown RBP16.72■□□□□ 0.27
ATRIP-208ENST00000639561 BOLA2Q9H3K6 86 aa16.72■□□□□ 0.27
ATRIP-208ENST00000639561 NMRK2Q9NPI5 230 aa16.72■□□□□ 0.27
ATRIP-208ENST00000639561 DBNLQ9UJU6 430 aaKnown RBP16.72■□□□□ 0.27
ATRIP-208ENST00000639561 UBN2Q6ZU65 1347 aa16.72■□□□□ 0.27
ATRIP-208ENST00000639561 ABCC12Q96J65 1359 aa16.72■□□□□ 0.27
ATRIP-208ENST00000639561 TOMM70O94826 608 aa16.71■□□□□ 0.27
ATRIP-208ENST00000639561 CCDC93Q567U6 631 aa16.71■□□□□ 0.27
ATRIP-208ENST00000639561 TNNI3KQ59H18 835 aa16.71■□□□□ 0.27
ATRIP-208ENST00000639561 FPGT-TNNI3KV9GXZ4 949 aa16.71■□□□□ 0.27
ATRIP-208ENST00000639561 TMX3Q96JJ7 454 aa16.71■□□□□ 0.26
ATRIP-208ENST00000639561 PKP1Q13835 747 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms