RNA–Protein interactions for RNA: ENST00000638940.1

SPIN3-216, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,785 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-216ENST00000638940 CCDC158Q5M9N0 1113 aa12.69□□□□□ -0.38
SPIN3-216ENST00000638940 KLHL34Q8N239 644 aa12.69□□□□□ -0.38
SPIN3-216ENST00000638940 ARXQ96QS3 562 aa12.69□□□□□ -0.38
SPIN3-216ENST00000638940 PUS3Q9BZE2 481 aaKnown RBP12.69□□□□□ -0.38
SPIN3-216ENST00000638940 ATP6V1DQ9Y5K8 247 aa12.69□□□□□ -0.38
SPIN3-216ENST00000638940 LAMB2P55268 1798 aa12.69□□□□□ -0.38
SPIN3-216ENST00000638940 ARAP2Q8WZ64 1704 aa12.69□□□□□ -0.38
SPIN3-216ENST00000638940 ZFYP08048 801 aaPredicted RBP12.69□□□□□ -0.38
SPIN3-216ENST00000638940 TTLL11Q8NHH1 800 aa12.69□□□□□ -0.38
SPIN3-216ENST00000638940 FAM89AQ96GI7 184 aa12.69□□□□□ -0.38
SPIN3-216ENST00000638940 MYH7P12883 1935 aa12.69□□□□□ -0.38
SPIN3-216ENST00000638940 RIC1Q4ADV7 1423 aa12.69□□□□□ -0.38
SPIN3-216ENST00000638940 RNF113AO15541 343 aaKnown RBP12.69□□□□□ -0.38
SPIN3-216ENST00000638940 STX6O43752 255 aa12.69□□□□□ -0.38
SPIN3-216ENST00000638940 PDE8AO60658 829 aa12.69□□□□□ -0.38
SPIN3-216ENST00000638940 HMGB1P09429 215 aaKnown RBP12.69□□□□□ -0.38
SPIN3-216ENST00000638940 CPA1P15085 419 aa12.69□□□□□ -0.38
SPIN3-216ENST00000638940 EIF5P55010 431 aaKnown RBP12.69□□□□□ -0.38
SPIN3-216ENST00000638940 CTSWP56202 376 aa12.69□□□□□ -0.38
SPIN3-216ENST00000638940 DDX46Q7L014 1031 aaKnown RBP12.69□□□□□ -0.38
SPIN3-216ENST00000638940 RIPOR2Q9Y4F9 1068 aa12.69□□□□□ -0.38
SPIN3-216ENST00000638940 LARGE1O95461 756 aa12.68□□□□□ -0.38
SPIN3-216ENST00000638940 ME3Q16798 604 aa12.68□□□□□ -0.38
SPIN3-216ENST00000638940 ZNF330Q9Y3S2 320 aaPredicted RBP12.68□□□□□ -0.38
SPIN3-216ENST00000638940 LAMA4Q16363 1823 aa12.68□□□□□ -0.38
SPIN3-216ENST00000638940 ANKRD18BA2A2Z9 1011 aa12.68□□□□□ -0.38
SPIN3-216ENST00000638940 GOLIM4O00461 696 aa12.68□□□□□ -0.38
SPIN3-216ENST00000638940 SYT1P21579 422 aa12.68□□□□□ -0.38
SPIN3-216ENST00000638940 TAF7LQ5H9L4 462 aa12.68□□□□□ -0.38
SPIN3-216ENST00000638940 DZIP3Q86Y13 1208 aaKnown RBP12.68□□□□□ -0.38
SPIN3-216ENST00000638940 GPT2Q8TD30 523 aa12.68□□□□□ -0.38
SPIN3-216ENST00000638940 COL5A3P25940 1745 aaPredicted RBP12.67□□□□□ -0.38
SPIN3-216ENST00000638940 GAS2L3Q86XJ1 694 aa12.67□□□□□ -0.38
SPIN3-216ENST00000638940 XAGE2Q96GT9 111 aa12.67□□□□□ -0.38
SPIN3-216ENST00000638940 NEK1Q96PY6 1258 aa12.67□□□□□ -0.38
SPIN3-216ENST00000638940 CCDC87Q9NVE4 849 aa12.67□□□□□ -0.38
SPIN3-216ENST00000638940 TPCN1Q9ULQ1 816 aa12.67□□□□□ -0.38
SPIN3-216ENST00000638940 IRS4O14654 1257 aaPredicted RBP12.67□□□□□ -0.38
SPIN3-216ENST00000638940 TOB2Q14106 344 aaPredicted RBP12.67□□□□□ -0.38
SPIN3-216ENST00000638940 CCDC83Q8IWF9 413 aa12.67□□□□□ -0.38
SPIN3-216ENST00000638940 BCORQ6W2J9 1755 aa12.66□□□□□ -0.38
SPIN3-216ENST00000638940 RGL2O15211 777 aa12.66□□□□□ -0.38
SPIN3-216ENST00000638940 F13A1P00488 732 aa12.66□□□□□ -0.38
SPIN3-216ENST00000638940 ITGA6P23229 1130 aa12.66□□□□□ -0.38
SPIN3-216ENST00000638940 GJB2P29033 226 aa12.66□□□□□ -0.38
SPIN3-216ENST00000638940 ST3GAL1Q11201 340 aa12.66□□□□□ -0.38
SPIN3-216ENST00000638940 ZSCAN23Q3MJ62 389 aa12.66□□□□□ -0.38
SPIN3-216ENST00000638940 TTC39AQ5SRH9 613 aa12.66□□□□□ -0.38
SPIN3-216ENST00000638940 INTS5Q6P9B9 1019 aaKnown RBP12.66□□□□□ -0.38
SPIN3-216ENST00000638940 SMARCC1Q92922 1105 aaPredicted RBP12.66□□□□□ -0.38
SPIN3-216ENST00000638940 AKAP11Q9UKA4 1901 aa12.66□□□□□ -0.38
SPIN3-216ENST00000638940 HSP90B1P14625 803 aaKnown RBP12.66□□□□□ -0.38
SPIN3-216ENST00000638940 PDCP20941 246 aa12.66□□□□□ -0.38
SPIN3-216ENST00000638940 RBM10P98175 930 aaKnown RBP12.66□□□□□ -0.38
SPIN3-216ENST00000638940 MARCH10Q8NA82 808 aaPredicted RBP12.66□□□□□ -0.38
SPIN3-216ENST00000638940 TRMT112Q9UI30 125 aaKnown RBP12.66□□□□□ -0.38
SPIN3-216ENST00000638940 PARP10Q53GL7 1025 aa12.65□□□□□ -0.38
SPIN3-216ENST00000638940 CAVIN1Q6NZI2 390 aaKnown RBP12.65□□□□□ -0.38
SPIN3-216ENST00000638940 VGLL2Q8N8G2 317 aa12.65□□□□□ -0.38
SPIN3-216ENST00000638940 RTL9Q8NET4 1388 aa12.65□□□□□ -0.38
SPIN3-216ENST00000638940 SYTL4Q96C24 671 aaPredicted RBP12.65□□□□□ -0.38
SPIN3-216ENST00000638940 SEC62Q99442 399 aaKnown RBP12.65□□□□□ -0.38
SPIN3-216ENST00000638940 NDUFB9Q9Y6M9 179 aa12.65□□□□□ -0.38
SPIN3-216ENST00000638940 TOM1O60784 492 aa12.65□□□□□ -0.38
SPIN3-216ENST00000638940 CYP21A2P08686 494 aa12.65□□□□□ -0.38
SPIN3-216ENST00000638940 PDE4CQ08493 712 aa12.65□□□□□ -0.38
SPIN3-216ENST00000638940 ATP2B3Q16720 1220 aa12.65□□□□□ -0.38
SPIN3-216ENST00000638940 CSPP1Q1MSJ5 1256 aa12.65□□□□□ -0.38
SPIN3-216ENST00000638940 MTMR6Q9Y217 621 aa12.65□□□□□ -0.38
SPIN3-216ENST00000638940 KAT6BQ8WYB5 2073 aa12.65□□□□□ -0.38
SPIN3-216ENST00000638940 TCHHQ07283 1943 aa12.65□□□□□ -0.38
SPIN3-216ENST00000638940 DDX60Q8IY21 1712 aaKnown RBP12.65□□□□□ -0.38
SPIN3-216ENST00000638940 UBN2Q6ZU65 1347 aa12.64□□□□□ -0.39
SPIN3-216ENST00000638940 GPTP24298 496 aa12.64□□□□□ -0.39
SPIN3-216ENST00000638940 GORABQ5T7V8 394 aa12.64□□□□□ -0.39
SPIN3-216ENST00000638940 LDHAL6AQ6ZMR3 332 aa12.64□□□□□ -0.39
SPIN3-216ENST00000638940 CCDC129Q6ZRS4 1044 aa12.64□□□□□ -0.39
SPIN3-216ENST00000638940 FBXL16Q8N461 479 aa12.64□□□□□ -0.39
SPIN3-216ENST00000638940 SYAP1Q96A49 352 aaPredicted RBP12.64□□□□□ -0.39
SPIN3-216ENST00000638940 GREM2Q9H772 168 aa12.64□□□□□ -0.39
SPIN3-216ENST00000638940 MAST3O60307 1309 aa12.64□□□□□ -0.39
SPIN3-216ENST00000638940 LOC102724428A0A0B4J2F2 783 aa12.64□□□□□ -0.39
SPIN3-216ENST00000638940 ADAMTS2O95450 1211 aa12.64□□□□□ -0.39
SPIN3-216ENST00000638940 NCLP19338 710 aaKnown RBP12.64□□□□□ -0.39
SPIN3-216ENST00000638940 SIK1P57059 783 aa12.64□□□□□ -0.39
SPIN3-216ENST00000638940 METTL24Q5JXM2 366 aa12.64□□□□□ -0.39
SPIN3-216ENST00000638940 CHMP4CQ96CF2 233 aa12.64□□□□□ -0.39
SPIN3-216ENST00000638940 AGXT2Q9BYV1 514 aa12.64□□□□□ -0.39
SPIN3-216ENST00000638940 MROH5Q6ZUA9 1318 aa12.64□□□□□ -0.39
SPIN3-216ENST00000638940 HSPD1P10809 573 aaKnown RBP12.64□□□□□ -0.39
SPIN3-216ENST00000638940 FAM43AQ8N2R8 423 aa12.64□□□□□ -0.39
SPIN3-216ENST00000638940 PANK2Q9BZ23 570 aa12.64□□□□□ -0.39
SPIN3-216ENST00000638940 CTNNA3Q9UI47 895 aa12.64□□□□□ -0.39
SPIN3-216ENST00000638940 TAF6LQ9Y6J9 622 aa12.64□□□□□ -0.39
SPIN3-216ENST00000638940 ATRNO75882 1429 aa12.63□□□□□ -0.39
SPIN3-216ENST00000638940 MYH14Q7Z406 1995 aaKnown RBP12.63□□□□□ -0.39
SPIN3-216ENST00000638940 ADORA1P30542 326 aa12.63□□□□□ -0.39
SPIN3-216ENST00000638940 CRKLP46109 303 aaKnown RBP12.63□□□□□ -0.39
SPIN3-216ENST00000638940 FGD1P98174 961 aa12.63□□□□□ -0.39
SPIN3-216ENST00000638940 TTF1Q15361 905 aaPredicted RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms