RNA–Protein interactions for RNA: ENST00000638708.1

STRADA-231, Transcript of STE20-related kinase adaptor alpha, human

TSL 2 BASIC

Gene STRADA, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRADA-231	ENST00000638708	ADAM21	Q9UKJ8	722 aa		12.92	□□□□□ -0.34
STRADA-231	ENST00000638708	RBM8A	Q9Y5S9	174 aa	Known RBP	12.92	□□□□□ -0.34
STRADA-231	ENST00000638708	PARP3	Q9Y6F1	533 aa		12.92	□□□□□ -0.34
STRADA-231	ENST00000638708	CPS1	P31327	1500 aa		12.92	□□□□□ -0.34
STRADA-231	ENST00000638708	KIN	O60870	393 aa	Known RBP	12.91	□□□□□ -0.34
STRADA-231	ENST00000638708	SURF6	O75683	361 aa	Known RBP	12.91	□□□□□ -0.34
STRADA-231	ENST00000638708	JAKMIP3	Q5VZ66	844 aa		12.91	□□□□□ -0.34
STRADA-231	ENST00000638708	CCAR1	Q8IX12	1150 aa	Known RBP	12.91	□□□□□ -0.34
STRADA-231	ENST00000638708	COG3	Q96JB2	828 aa		12.91	□□□□□ -0.34
STRADA-231	ENST00000638708	FUT8	Q9BYC5	575 aa		12.91	□□□□□ -0.34
STRADA-231	ENST00000638708	URI1	O94763	535 aa	Predicted RBP	12.91	□□□□□ -0.34
STRADA-231	ENST00000638708	SMC2	O95347	1197 aa		12.91	□□□□□ -0.34
STRADA-231	ENST00000638708	SULT6B1	Q6IMI4	303 aa		12.91	□□□□□ -0.34
STRADA-231	ENST00000638708	FCHSD1	Q86WN1	690 aa		12.91	□□□□□ -0.34
STRADA-231	ENST00000638708	SECISBP2L	Q93073	1101 aa	Known RBP	12.91	□□□□□ -0.34
STRADA-231	ENST00000638708	CCDC34	Q96HJ3	373 aa		12.91	□□□□□ -0.34
STRADA-231	ENST00000638708	GOLPH3L	Q9H4A5	285 aa		12.91	□□□□□ -0.34
STRADA-231	ENST00000638708	TSPYL4	Q9UJ04	414 aa		12.91	□□□□□ -0.34
STRADA-231	ENST00000638708	RPS6KB1	P23443	525 aa		12.9	□□□□□ -0.34
STRADA-231	ENST00000638708	FAM160A1	Q05DH4	1040 aa		12.9	□□□□□ -0.34
STRADA-231	ENST00000638708	RRS1	Q15050	365 aa	Known RBP	12.9	□□□□□ -0.34
STRADA-231	ENST00000638708	BLOC1S2	Q6QNY1	142 aa		12.9	□□□□□ -0.34
STRADA-231	ENST00000638708	SYTL4	Q96C24	671 aa	Predicted RBP	12.9	□□□□□ -0.34
STRADA-231	ENST00000638708	SIRT1	Q96EB6	747 aa		12.9	□□□□□ -0.34
STRADA-231	ENST00000638708	XPO4	Q9C0E2	1151 aa	Known RBP	12.9	□□□□□ -0.34
STRADA-231	ENST00000638708	USP44	Q9H0E7	712 aa		12.9	□□□□□ -0.34
STRADA-231	ENST00000638708	JRKL	Q9Y4A0	524 aa		12.9	□□□□□ -0.34
STRADA-231	ENST00000638708	SLC27A2	O14975	620 aa		12.9	□□□□□ -0.34
STRADA-231	ENST00000638708	EIF4A2	Q14240	407 aa	Known RBP	12.9	□□□□□ -0.34
STRADA-231	ENST00000638708	RSRC2	Q7L4I2	434 aa	Known RBP	12.9	□□□□□ -0.34
STRADA-231	ENST00000638708	PPP1R42	Q7Z4L9	355 aa		12.9	□□□□□ -0.34
STRADA-231	ENST00000638708	ENGASE	Q8NFI3	743 aa		12.9	□□□□□ -0.34
STRADA-231	ENST00000638708	BRF1	Q92994	677 aa		12.9	□□□□□ -0.34
STRADA-231	ENST00000638708	MPHOSPH8	Q99549	860 aa		12.9	□□□□□ -0.34
STRADA-231	ENST00000638708	ESF1	Q9H501	851 aa	Known RBP	12.9	□□□□□ -0.34
STRADA-231	ENST00000638708	RCOR1	Q9UKL0	485 aa		12.9	□□□□□ -0.34
STRADA-231	ENST00000638708	FMN2	Q9NZ56	1722 aa		12.89	□□□□□ -0.35
STRADA-231	ENST00000638708	NPHP4	O75161	1426 aa	Predicted RBP	12.89	□□□□□ -0.35
STRADA-231	ENST00000638708		H3BQF6	201 aa		12.89	□□□□□ -0.35
STRADA-231	ENST00000638708	TOB2	Q14106	344 aa	Predicted RBP	12.89	□□□□□ -0.35
STRADA-231	ENST00000638708	TSGA10IP	Q3SY00	556 aa		12.89	□□□□□ -0.35
STRADA-231	ENST00000638708	HSP90AB4P	Q58FF6	505 aa		12.89	□□□□□ -0.35
STRADA-231	ENST00000638708	CCDC30	Q5VVM6	783 aa		12.89	□□□□□ -0.35
STRADA-231	ENST00000638708	MSL3	Q8N5Y2	521 aa	Known RBP	12.89	□□□□□ -0.35
STRADA-231	ENST00000638708	DDX54	Q8TDD1	881 aa	Known RBP	12.89	□□□□□ -0.35
STRADA-231	ENST00000638708	RABGGTA	Q92696	567 aa		12.89	□□□□□ -0.35
STRADA-231	ENST00000638708	MAP4K1	Q92918	833 aa		12.89	□□□□□ -0.35
STRADA-231	ENST00000638708	SNRK	Q9NRH2	765 aa		12.89	□□□□□ -0.35
STRADA-231	ENST00000638708	IFNK	Q9P0W0	207 aa		12.89	□□□□□ -0.35
STRADA-231	ENST00000638708	NALCN	Q8IZF0	1738 aa		12.89	□□□□□ -0.35
STRADA-231	ENST00000638708	RIMS1	Q86UR5	1692 aa	Known RBP	12.89	□□□□□ -0.35
STRADA-231	ENST00000638708	PEAK1	Q9H792	1746 aa		12.89	□□□□□ -0.35
STRADA-231	ENST00000638708	MAP2K7	O14733	419 aa		12.88	□□□□□ -0.35
STRADA-231	ENST00000638708	FANCG	O15287	622 aa		12.88	□□□□□ -0.35
STRADA-231	ENST00000638708	ATP2B1	P20020	1258 aa		12.88	□□□□□ -0.35
STRADA-231	ENST00000638708	PSEN1	P49768	467 aa		12.88	□□□□□ -0.35
STRADA-231	ENST00000638708	PACS2	Q86VP3	889 aa		12.88	□□□□□ -0.35
STRADA-231	ENST00000638708	ZRANB1	Q9UGI0	708 aa		12.88	□□□□□ -0.35
STRADA-231	ENST00000638708	CCDC151	A5D8V7	595 aa		12.88	□□□□□ -0.35
STRADA-231	ENST00000638708	HIP1	O00291	1037 aa		12.88	□□□□□ -0.35
STRADA-231	ENST00000638708	BRD3	Q15059	726 aa		12.88	□□□□□ -0.35
STRADA-231	ENST00000638708	ATL3	Q6DD88	541 aa		12.88	□□□□□ -0.35
STRADA-231	ENST00000638708	JCAD	Q9P266	1359 aa		12.88	□□□□□ -0.35
STRADA-231	ENST00000638708	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	12.87	□□□□□ -0.35
STRADA-231	ENST00000638708		H3BQV1	296 aa		12.87	□□□□□ -0.35
STRADA-231	ENST00000638708	ADD1	P35611	737 aa	Known RBP	12.87	□□□□□ -0.35
STRADA-231	ENST00000638708	PPP2R3A	Q06190	1150 aa		12.87	□□□□□ -0.35
STRADA-231	ENST00000638708	IFFO2	Q5TF58	517 aa		12.87	□□□□□ -0.35
STRADA-231	ENST00000638708	PPM1E	Q8WY54	764 aa		12.87	□□□□□ -0.35
STRADA-231	ENST00000638708	EVI5L	Q96CN4	794 aa		12.87	□□□□□ -0.35
STRADA-231	ENST00000638708	LOC102724159	A0A0B4J2E5	919 aa		12.87	□□□□□ -0.35
STRADA-231	ENST00000638708	ZSCAN12	O43309	604 aa		12.87	□□□□□ -0.35
STRADA-231	ENST00000638708	CP	P00450	1065 aa		12.87	□□□□□ -0.35
STRADA-231	ENST00000638708	IFIT2	P09913	472 aa	Known RBP	12.87	□□□□□ -0.35
STRADA-231	ENST00000638708	MAP3K9	P80192	1104 aa		12.87	□□□□□ -0.35
STRADA-231	ENST00000638708	PWP2	Q15269	919 aa	Known RBP	12.87	□□□□□ -0.35
STRADA-231	ENST00000638708	LONRF2	Q1L5Z9	754 aa		12.87	□□□□□ -0.35
STRADA-231	ENST00000638708	SUGP1	Q8IWZ8	645 aa	Known RBP	12.87	□□□□□ -0.35
STRADA-231	ENST00000638708	GOLGA1	Q92805	767 aa		12.87	□□□□□ -0.35
STRADA-231	ENST00000638708	PARD6B	Q9BYG5	372 aa		12.87	□□□□□ -0.35
STRADA-231	ENST00000638708	MIS18A	Q9NYP9	233 aa		12.87	□□□□□ -0.35
STRADA-231	ENST00000638708	MKRN1	Q9UHC7	482 aa	Known RBP	12.87	□□□□□ -0.35
STRADA-231	ENST00000638708	MRFAP1	Q9Y605	127 aa		12.87	□□□□□ -0.35
STRADA-231	ENST00000638708		A0A087WWV3	80 aa		12.86	□□□□□ -0.35
STRADA-231	ENST00000638708	GOLGA6L9	A6NEM1	432 aa		12.86	□□□□□ -0.35
STRADA-231	ENST00000638708	EIF3CL	B5ME19	914 aa	Known RBP	12.86	□□□□□ -0.35
STRADA-231	ENST00000638708	JAK2	O60674	1132 aa		12.86	□□□□□ -0.35
STRADA-231	ENST00000638708	NAA16	Q6N069	864 aa	Predicted RBP	12.86	□□□□□ -0.35
STRADA-231	ENST00000638708	FSIP1	Q8NA03	581 aa		12.86	□□□□□ -0.35
STRADA-231	ENST00000638708	CHMP4C	Q96CF2	233 aa		12.86	□□□□□ -0.35
STRADA-231	ENST00000638708	GPATCH3	Q96I76	525 aa		12.86	□□□□□ -0.35
STRADA-231	ENST00000638708	EIF3C	Q99613	913 aa	Known RBP	12.86	□□□□□ -0.35
STRADA-231	ENST00000638708	HMG20B	Q9P0W2	317 aa		12.86	□□□□□ -0.35
STRADA-231	ENST00000638708	CORO7	P57737	925 aa		12.86	□□□□□ -0.35
STRADA-231	ENST00000638708	AXDND1	Q5T1B0	1012 aa	Predicted RBP	12.86	□□□□□ -0.35
STRADA-231	ENST00000638708	EPC1	Q9H2F5	836 aa		12.86	□□□□□ -0.35
STRADA-231	ENST00000638708	ECHDC1	Q9NTX5	307 aa		12.86	□□□□□ -0.35
STRADA-231	ENST00000638708	MED23	Q9ULK4	1368 aa		12.85	□□□□□ -0.35
STRADA-231	ENST00000638708	VWA3A	A6NCI4	1184 aa		12.85	□□□□□ -0.35
STRADA-231	ENST00000638708	SRGAP3	O43295	1099 aa		12.85	□□□□□ -0.35

Retrieved 100 of 20,778 RNA–protein pairs in 152.5 ms