RNA–Protein interactions for RNA: ENST00000638454.1

PRAMEF13-202, Transcript of PRAME family member 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRAMEF13, Length 1,331 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF13-202ENST00000638454 IRF6O14896 467 aa13□□□□□ -0.33
PRAMEF13-202ENST00000638454 SMARCA5O60264 1052 aaPredicted RBP13□□□□□ -0.33
PRAMEF13-202ENST00000638454 FOXO4P98177 505 aa13□□□□□ -0.33
PRAMEF13-202ENST00000638454 SF3B2Q13435 895 aaKnown RBP13□□□□□ -0.33
PRAMEF13-202ENST00000638454 TXNRD1Q16881 649 aa13□□□□□ -0.33
PRAMEF13-202ENST00000638454 PLEKHM2Q8IWE5 1019 aa13□□□□□ -0.33
PRAMEF13-202ENST00000638454 FLAD1Q8NFF5 587 aa13□□□□□ -0.33
PRAMEF13-202ENST00000638454 SETDB2Q96T68 719 aa13□□□□□ -0.33
PRAMEF13-202ENST00000638454 OSBPL3Q9H4L5 887 aa13□□□□□ -0.33
PRAMEF13-202ENST00000638454 TTC41PQ6P2S7 1318 aa12.99□□□□□ -0.33
PRAMEF13-202ENST00000638454 ANKRD18BA2A2Z9 1011 aa12.99□□□□□ -0.33
PRAMEF13-202ENST00000638454 NPHP1O15259 732 aa12.99□□□□□ -0.33
PRAMEF13-202ENST00000638454 IL15P40933 162 aaPredicted RBP12.99□□□□□ -0.33
PRAMEF13-202ENST00000638454 CTSWP56202 376 aa12.99□□□□□ -0.33
PRAMEF13-202ENST00000638454 KCNQ4P56696 695 aa12.99□□□□□ -0.33
PRAMEF13-202ENST00000638454 EPHA10Q5JZY3 1008 aa12.99□□□□□ -0.33
PRAMEF13-202ENST00000638454 TTC22Q5TAA0 569 aa12.99□□□□□ -0.33
PRAMEF13-202ENST00000638454 ILDR1Q86SU0 546 aaPredicted RBP12.99□□□□□ -0.33
PRAMEF13-202ENST00000638454 JARID2Q92833 1246 aaPredicted RBP12.99□□□□□ -0.33
PRAMEF13-202ENST00000638454 UBN2Q6ZU65 1347 aa12.98□□□□□ -0.33
PRAMEF13-202ENST00000638454 CIAO1O76071 339 aa12.98□□□□□ -0.33
PRAMEF13-202ENST00000638454 ANP32AP39687 249 aaKnown RBP12.98□□□□□ -0.33
PRAMEF13-202ENST00000638454 PDE1AP54750 535 aa12.98□□□□□ -0.33
PRAMEF13-202ENST00000638454 CCDC152Q4G0S7 254 aa12.98□□□□□ -0.33
PRAMEF13-202ENST00000638454 USPL1Q5W0Q7 1092 aa12.98□□□□□ -0.33
PRAMEF13-202ENST00000638454 POTEAQ6S8J7 498 aa12.98□□□□□ -0.33
PRAMEF13-202ENST00000638454 SIL1Q9H173 461 aa12.98□□□□□ -0.33
PRAMEF13-202ENST00000638454 IL1RAPL2Q9NP60 686 aa12.98□□□□□ -0.33
PRAMEF13-202ENST00000638454 PA2G4Q9UQ80 394 aaKnown RBP12.98□□□□□ -0.33
PRAMEF13-202ENST00000638454 RGPD3A6NKT7 1758 aaPredicted RBP12.97□□□□□ -0.33
PRAMEF13-202ENST00000638454 RGPD4Q7Z3J3 1758 aa12.97□□□□□ -0.33
PRAMEF13-202ENST00000638454 USP42Q9H9J4 1324 aaKnown RBP12.97□□□□□ -0.33
PRAMEF13-202ENST00000638454 GRXCR2A6NFK2 248 aa12.97□□□□□ -0.33
PRAMEF13-202ENST00000638454 CDC45O75419 566 aa12.97□□□□□ -0.33
PRAMEF13-202ENST00000638454 PHF14O94880 888 aa12.97□□□□□ -0.33
PRAMEF13-202ENST00000638454 CSF1RP07333 972 aa12.97□□□□□ -0.33
PRAMEF13-202ENST00000638454 PTPN12Q05209 780 aaKnown RBP12.97□□□□□ -0.33
PRAMEF13-202ENST00000638454 C8orf34Q49A92 452 aa12.97□□□□□ -0.33
PRAMEF13-202ENST00000638454 SUSD4Q5VX71 490 aa12.97□□□□□ -0.33
PRAMEF13-202ENST00000638454 TPTE2Q6XPS3 522 aa12.97□□□□□ -0.33
PRAMEF13-202ENST00000638454 RGS17Q9UGC6 210 aaPredicted RBP12.97□□□□□ -0.33
PRAMEF13-202ENST00000638454 STAP2Q9UGK3 403 aa12.97□□□□□ -0.33
PRAMEF13-202ENST00000638454 AKAP2Q9Y2D5 859 aa12.97□□□□□ -0.33
PRAMEF13-202ENST00000638454 RBM19Q9Y4C8 960 aaKnown RBP12.97□□□□□ -0.33
PRAMEF13-202ENST00000638454 MYH3P11055 1940 aa12.96□□□□□ -0.33
PRAMEF13-202ENST00000638454 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.96□□□□□ -0.33
PRAMEF13-202ENST00000638454 EYA2O00167 538 aa12.96□□□□□ -0.33
PRAMEF13-202ENST00000638454 GLRX3O76003 335 aaKnown RBP12.96□□□□□ -0.33
PRAMEF13-202ENST00000638454 RFX5P48382 616 aaPredicted RBP12.96□□□□□ -0.33
PRAMEF13-202ENST00000638454 AACSQ86V21 672 aa12.96□□□□□ -0.33
PRAMEF13-202ENST00000638454 NBPF5PQ86XG9 351 aaPredicted RBP12.96□□□□□ -0.33
PRAMEF13-202ENST00000638454 GPR108Q9NPR9 543 aa12.96□□□□□ -0.33
PRAMEF13-202ENST00000638454 LRRC4BQ9NT99 713 aa12.96□□□□□ -0.33
PRAMEF13-202ENST00000638454 CARMIL3Q8ND23 1372 aa12.96□□□□□ -0.34
PRAMEF13-202ENST00000638454 FAM177BA6PVY3 158 aa12.95□□□□□ -0.34
PRAMEF13-202ENST00000638454 NTSR2O95665 410 aa12.95□□□□□ -0.34
PRAMEF13-202ENST00000638454 C16orf71Q8IYS4 520 aaPredicted RBP12.95□□□□□ -0.34
PRAMEF13-202ENST00000638454 TTLL11Q8NHH1 800 aa12.95□□□□□ -0.34
PRAMEF13-202ENST00000638454 CDC5LQ99459 802 aaKnown RBP12.95□□□□□ -0.34
PRAMEF13-202ENST00000638454 ECHDC1Q9NTX5 307 aa12.95□□□□□ -0.34
PRAMEF13-202ENST00000638454 TFCP2L1Q9NZI6 479 aa12.95□□□□□ -0.34
PRAMEF13-202ENST00000638454 CEP126Q9P2H0 1117 aa12.95□□□□□ -0.34
PRAMEF13-202ENST00000638454 RTL9Q8NET4 1388 aa12.95□□□□□ -0.34
PRAMEF13-202ENST00000638454 ITGA6P23229 1130 aa12.94□□□□□ -0.34
PRAMEF13-202ENST00000638454 IGHMBP2P38935 993 aaKnown RBP12.94□□□□□ -0.34
PRAMEF13-202ENST00000638454 BAG6P46379 1132 aa12.94□□□□□ -0.34
PRAMEF13-202ENST00000638454 FOXK1P85037 733 aa12.94□□□□□ -0.34
PRAMEF13-202ENST00000638454 BICDL1Q6ZP65 573 aa12.94□□□□□ -0.34
PRAMEF13-202ENST00000638454 CNTROBQ8N137 903 aa12.94□□□□□ -0.34
PRAMEF13-202ENST00000638454 CNNM1Q9NRU3 951 aa12.94□□□□□ -0.34
PRAMEF13-202ENST00000638454 LAMB2P55268 1798 aa12.94□□□□□ -0.34
PRAMEF13-202ENST00000638454 TRIM6-TRIM34B2RNG4 842 aa12.93□□□□□ -0.34
PRAMEF13-202ENST00000638454 CD44P16070 742 aaKnown RBP12.93□□□□□ -0.34
PRAMEF13-202ENST00000638454 TBC1D9BQ66K14 1250 aa12.93□□□□□ -0.34
PRAMEF13-202ENST00000638454 LDHAL6AQ6ZMR3 332 aa12.93□□□□□ -0.34
PRAMEF13-202ENST00000638454 NUTM1Q86Y26 1132 aa12.93□□□□□ -0.34
PRAMEF13-202ENST00000638454 KLHDC4Q8TBB5 520 aa12.93□□□□□ -0.34
PRAMEF13-202ENST00000638454 NLRP3Q96P20 1036 aa12.93□□□□□ -0.34
PRAMEF13-202ENST00000638454 MPHOSPH8Q99549 860 aa12.93□□□□□ -0.34
PRAMEF13-202ENST00000638454 SRP68Q9UHB9 627 aaKnown RBP12.93□□□□□ -0.34
PRAMEF13-202ENST00000638454 SALL3Q9BXA9 1300 aa12.93□□□□□ -0.34
PRAMEF13-202ENST00000638454 SASH1O94885 1247 aa12.92□□□□□ -0.34
PRAMEF13-202ENST00000638454 C4AP0C0L4 1744 aa12.92□□□□□ -0.34
PRAMEF13-202ENST00000638454 HCLS1P14317 486 aaPredicted RBP12.92□□□□□ -0.34
PRAMEF13-202ENST00000638454 ST5P78524 1137 aa12.92□□□□□ -0.34
PRAMEF13-202ENST00000638454 TFCP2Q12800 502 aa12.92□□□□□ -0.34
PRAMEF13-202ENST00000638454 TNNI3KQ59H18 835 aa12.92□□□□□ -0.34
PRAMEF13-202ENST00000638454 SLC10A5Q5PT55 438 aa12.92□□□□□ -0.34
PRAMEF13-202ENST00000638454 UBR3Q6ZT12 1888 aa12.92□□□□□ -0.34
PRAMEF13-202ENST00000638454 TMC2Q8TDI7 906 aa12.92□□□□□ -0.34
PRAMEF13-202ENST00000638454 OTUD7AQ8TE49 926 aaPredicted RBP12.92□□□□□ -0.34
PRAMEF13-202ENST00000638454 MS4A3Q96HJ5 214 aa12.92□□□□□ -0.34
PRAMEF13-202ENST00000638454 GREM2Q9H772 168 aa12.92□□□□□ -0.34
PRAMEF13-202ENST00000638454 FPGT-TNNI3KV9GXZ4 949 aa12.92□□□□□ -0.34
PRAMEF13-202ENST00000638454 MROH5Q6ZUA9 1318 aa12.92□□□□□ -0.34
PRAMEF13-202ENST00000638454 TNS1Q9HBL0 1735 aaKnown RBP12.92□□□□□ -0.34
PRAMEF13-202ENST00000638454 METTL24Q5JXM2 366 aa12.91□□□□□ -0.34
PRAMEF13-202ENST00000638454 CNBD1Q8NA66 436 aa12.91□□□□□ -0.34
PRAMEF13-202ENST00000638454 BCL2L12Q9HB09 334 aa12.91□□□□□ -0.34
PRAMEF13-202ENST00000638454 GOPCQ9HD26 462 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms