RNA–Protein interactions for RNA: ENST00000638417.1

MYCN-202, Transcript of MYCN proto-oncogene, bHLH transcription factor, humanhuman

TSL 2 BASIC

Gene MYCN, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MYCN-202ENST00000638417 DPY19L2Q6NUT2 758 aa18.83■□□□□ 0.61
MYCN-202ENST00000638417 CDHR2Q9BYE9 1310 aa18.82■□□□□ 0.6
MYCN-202ENST00000638417 OS9Q13438 667 aaPredicted RBP18.82■□□□□ 0.6
MYCN-202ENST00000638417 C3orf67Q6ZVT6 689 aa18.82■□□□□ 0.6
MYCN-202ENST00000638417 RBM46Q8TBY0 533 aaKnown RBP18.82■□□□□ 0.6
MYCN-202ENST00000638417 SH3TC1Q8TE82 1336 aa18.82■□□□□ 0.6
MYCN-202ENST00000638417 KLHDC4Q8TBB5 520 aa18.82■□□□□ 0.6
MYCN-202ENST00000638417 PLA2G12BQ9BX93 195 aa18.82■□□□□ 0.6
MYCN-202ENST00000638417 LRRCC1Q9C099 1032 aa18.82■□□□□ 0.6
MYCN-202ENST00000638417 ZNF277Q9NRM2 450 aaPredicted RBP18.82■□□□□ 0.6
MYCN-202ENST00000638417 RAB11FIP3O75154 756 aa18.81■□□□□ 0.6
MYCN-202ENST00000638417 VEGFAP15692 232 aaPredicted RBP18.81■□□□□ 0.6
MYCN-202ENST00000638417 HSP90AB4PQ58FF6 505 aa18.81■□□□□ 0.6
MYCN-202ENST00000638417 SLC51AQ86UW1 340 aa18.81■□□□□ 0.6
MYCN-202ENST00000638417 CCDC85AQ96PX6 553 aaPredicted RBP18.81■□□□□ 0.6
MYCN-202ENST00000638417 NOP58Q9Y2X3 529 aaKnown RBP18.81■□□□□ 0.6
MYCN-202ENST00000638417 FKBP4Q02790 459 aaKnown RBP eCLIP18.8■□□□□ 0.6
MYCN-202ENST00000638417 SIL1Q9H173 461 aa18.8■□□□□ 0.6
MYCN-202ENST00000638417 PDE8AO60658 829 aa18.79■□□□□ 0.6
MYCN-202ENST00000638417 DDNO94850 711 aaPredicted RBP18.79■□□□□ 0.6
MYCN-202ENST00000638417 HCLS1P14317 486 aaPredicted RBP18.79■□□□□ 0.6
MYCN-202ENST00000638417 RFX5P48382 616 aaPredicted RBP18.79■□□□□ 0.6
MYCN-202ENST00000638417 G3BP1Q13283 466 aaKnown RBP eCLIP18.79■□□□□ 0.6
MYCN-202ENST00000638417 RTKN2Q8IZC4 609 aa18.79■□□□□ 0.6
MYCN-202ENST00000638417 RIC1Q4ADV7 1423 aa18.79■□□□□ 0.6
MYCN-202ENST00000638417 RBM17Q96I25 401 aaKnown RBP18.79■□□□□ 0.6
MYCN-202ENST00000638417 NLRP3Q96P20 1036 aa18.79■□□□□ 0.6
MYCN-202ENST00000638417 POTECB2RU33 542 aa18.78■□□□□ 0.6
MYCN-202ENST00000638417 CSF1RP07333 972 aa18.78■□□□□ 0.6
MYCN-202ENST00000638417 APLP1P51693 650 aa18.78■□□□□ 0.6
MYCN-202ENST00000638417 CTSWP56202 376 aa18.78■□□□□ 0.6
MYCN-202ENST00000638417 PTPN12Q05209 780 aaKnown RBP18.78■□□□□ 0.6
MYCN-202ENST00000638417 RHPN1Q8TCX5 695 aa18.78■□□□□ 0.6
MYCN-202ENST00000638417 KIF1BPQ96EK5 621 aa18.78■□□□□ 0.6
MYCN-202ENST00000638417 IL1RAPL2Q9NP60 686 aa18.78■□□□□ 0.6
MYCN-202ENST00000638417 COPRSQ9NQ92 184 aa18.78■□□□□ 0.6
MYCN-202ENST00000638417 HOXA10P31260 410 aaPredicted RBP18.77■□□□□ 0.6
MYCN-202ENST00000638417 HTRA3P83110 453 aa18.77■□□□□ 0.6
MYCN-202ENST00000638417 FSTL1Q12841 308 aa18.77■□□□□ 0.6
MYCN-202ENST00000638417 CCDC57Q2TAC2 916 aa18.77■□□□□ 0.6
MYCN-202ENST00000638417 TTLL11Q8NHH1 800 aa18.77■□□□□ 0.6
MYCN-202ENST00000638417 WDR90Q96KV7 1748 aa18.77■□□□□ 0.6
MYCN-202ENST00000638417 PPEF1O14829 653 aaPredicted RBP18.76■□□□□ 0.59
MYCN-202ENST00000638417 FAM161AQ3B820 660 aa18.76■□□□□ 0.59
MYCN-202ENST00000638417 ERC1Q8IUD2 1116 aa18.76■□□□□ 0.59
MYCN-202ENST00000638417 SMC1BQ8NDV3 1235 aa18.76■□□□□ 0.59
MYCN-202ENST00000638417 HSP90B1P14625 803 aaKnown RBP18.76■□□□□ 0.59
MYCN-202ENST00000638417 OTUD7AQ8TE49 926 aaPredicted RBP18.76■□□□□ 0.59
MYCN-202ENST00000638417 ZNF594Q96JF6 807 aaPredicted RBP18.76■□□□□ 0.59
MYCN-202ENST00000638417 CRAMP1Q96RY5 1269 aa18.76■□□□□ 0.59
MYCN-202ENST00000638417 IARSP41252 1262 aaKnown RBP18.75■□□□□ 0.59
MYCN-202ENST00000638417 IFIT5Q13325 482 aaKnown RBP18.75■□□□□ 0.59
MYCN-202ENST00000638417 SLC10A5Q5PT55 438 aa18.75■□□□□ 0.59
MYCN-202ENST00000638417 GREM2Q9H772 168 aa18.75■□□□□ 0.59
MYCN-202ENST00000638417 ZNF541Q9H0D2 1346 aa18.74■□□□□ 0.59
MYCN-202ENST00000638417 LAMB2P55268 1798 aa18.74■□□□□ 0.59
MYCN-202ENST00000638417 TAF7LQ5H9L4 462 aa18.74■□□□□ 0.59
MYCN-202ENST00000638417 PLEKHM2Q8IWE5 1019 aa18.74■□□□□ 0.59
MYCN-202ENST00000638417 SNED1Q8TER0 1413 aa18.74■□□□□ 0.59
MYCN-202ENST00000638417 SASH1O94885 1247 aa18.73■□□□□ 0.59
MYCN-202ENST00000638417 ITGA6P23229 1130 aa18.73■□□□□ 0.59
MYCN-202ENST00000638417 ANKRD18BA2A2Z9 1011 aa18.73■□□□□ 0.59
MYCN-202ENST00000638417 PSMD1Q99460 953 aa18.73■□□□□ 0.59
MYCN-202ENST00000638417 CC2D2BQ6DHV5 1058 aa18.72■□□□□ 0.59
MYCN-202ENST00000638417 CLASRPQ8N2M8 674 aaKnown RBP18.72■□□□□ 0.59
MYCN-202ENST00000638417 POTEIP0CG38 1075 aa18.71■□□□□ 0.59
MYCN-202ENST00000638417 POTEJP0CG39 1038 aa18.71■□□□□ 0.59
MYCN-202ENST00000638417 CCDC152Q4G0S7 254 aa18.71■□□□□ 0.59
MYCN-202ENST00000638417 JDP2Q8WYK2 163 aa18.71■□□□□ 0.59
MYCN-202ENST00000638417 COL4A5P29400 1685 aa18.7■□□□□ 0.58
MYCN-202ENST00000638417 EYA2O00167 538 aa18.7■□□□□ 0.58
MYCN-202ENST00000638417 LRRC24Q50LG9 513 aa18.7■□□□□ 0.58
MYCN-202ENST00000638417 PUS3Q9BZE2 481 aaKnown RBP18.7■□□□□ 0.58
MYCN-202ENST00000638417 TMX4Q9H1E5 349 aaPredicted RBP18.7■□□□□ 0.58
MYCN-202ENST00000638417 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.7■□□□□ 0.58
MYCN-202ENST00000638417 TAF1P21675 1872 aa18.7■□□□□ 0.58
MYCN-202ENST00000638417 TFCP2Q12800 502 aa18.69■□□□□ 0.58
MYCN-202ENST00000638417 DDX46Q7L014 1031 aaKnown RBP18.69■□□□□ 0.58
MYCN-202ENST00000638417 ATG9AQ7Z3C6 839 aa18.69■□□□□ 0.58
MYCN-202ENST00000638417 ATP6V0A2Q9Y487 856 aa18.69■□□□□ 0.58
MYCN-202ENST00000638417 DDX60Q8IY21 1712 aaKnown RBP18.69■□□□□ 0.58
MYCN-202ENST00000638417 IL15P40933 162 aaPredicted RBP18.69■□□□□ 0.58
MYCN-202ENST00000638417 PDE1AP54750 535 aa18.69■□□□□ 0.58
MYCN-202ENST00000638417 AACSQ86V21 672 aa18.69■□□□□ 0.58
MYCN-202ENST00000638417 LARGE2Q8N3Y3 721 aa18.69■□□□□ 0.58
MYCN-202ENST00000638417 DNAJC5GQ8N7S2 189 aa18.69■□□□□ 0.58
MYCN-202ENST00000638417 SEC31BQ9NQW1 1179 aa18.69■□□□□ 0.58
MYCN-202ENST00000638417 FZD9O00144 591 aa18.68■□□□□ 0.58
MYCN-202ENST00000638417 CIAO1O76071 339 aa18.68■□□□□ 0.58
MYCN-202ENST00000638417 IFIT2P09913 472 aaKnown RBP18.68■□□□□ 0.58
MYCN-202ENST00000638417 MX1P20591 662 aa18.68■□□□□ 0.58
MYCN-202ENST00000638417 LDHAL6AQ6ZMR3 332 aa18.68■□□□□ 0.58
MYCN-202ENST00000638417 MYH3P11055 1940 aa18.68■□□□□ 0.58
MYCN-202ENST00000638417 IQCA1LA6NCM1 817 aa18.67■□□□□ 0.58
MYCN-202ENST00000638417 SF3B3Q15393 1217 aaKnown RBP18.67■□□□□ 0.58
MYCN-202ENST00000638417 TSHZ3Q63HK5 1081 aa18.67■□□□□ 0.58
MYCN-202ENST00000638417 EAF2Q96CJ1 260 aaPredicted RBP18.67■□□□□ 0.58
MYCN-202ENST00000638417 L3MBTL3Q96JM7 780 aaPredicted RBP18.67■□□□□ 0.58
MYCN-202ENST00000638417 GJA3Q9Y6H8 435 aa18.67■□□□□ 0.58
MYCN-202ENST00000638417 PPIP5K2O43314 1243 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms