RNA–Protein interactions for RNA: ENST00000638134.1

CLCN2-222, Transcript of chloride voltage-gated channel 2, human

TSL 5

Gene CLCN2, Length 2,118 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLCN2-222	ENST00000638134	ERCC6L	Q2NKX8	1250 aa		18.36	■□□□□ 0.53
CLCN2-222	ENST00000638134	CCDC93	Q567U6	631 aa		18.36	■□□□□ 0.53
CLCN2-222	ENST00000638134	IQUB	Q8NA54	791 aa		18.36	■□□□□ 0.53
CLCN2-222	ENST00000638134	CCDC191	Q8NCU4	936 aa		18.36	■□□□□ 0.53
CLCN2-222	ENST00000638134	DDX54	Q8TDD1	881 aa	Known RBP	18.36	■□□□□ 0.53
CLCN2-222	ENST00000638134	PSD3	Q9NYI0	1048 aa		18.36	■□□□□ 0.53
CLCN2-222	ENST00000638134	WNK3	Q9BYP7	1800 aa		18.36	■□□□□ 0.53
CLCN2-222	ENST00000638134	PARP4	Q9UKK3	1724 aa	Known RBP	18.36	■□□□□ 0.53
CLCN2-222	ENST00000638134		A0A0G2JS52	829 aa		18.35	■□□□□ 0.53
CLCN2-222	ENST00000638134	ZNF165	P49910	485 aa		18.35	■□□□□ 0.53
CLCN2-222	ENST00000638134	TRPC5	Q9UL62	973 aa	Predicted RBP	18.35	■□□□□ 0.53
CLCN2-222	ENST00000638134	APBB1	O00213	710 aa		18.35	■□□□□ 0.53
CLCN2-222	ENST00000638134	GUCY2C	P25092	1073 aa		18.35	■□□□□ 0.53
CLCN2-222	ENST00000638134	KRT85	P78386	507 aa		18.35	■□□□□ 0.53
CLCN2-222	ENST00000638134	NOM1	Q5C9Z4	860 aa	Known RBP	18.35	■□□□□ 0.53
CLCN2-222	ENST00000638134	MPRIP	Q6WCQ1	1025 aa		18.35	■□□□□ 0.53
CLCN2-222	ENST00000638134	SRL	Q86TD4	932 aa		18.35	■□□□□ 0.53
CLCN2-222	ENST00000638134	C10orf67	Q8IYJ2	551 aa		18.35	■□□□□ 0.53
CLCN2-222	ENST00000638134	FBXO18	Q8NFZ0	1043 aa		18.35	■□□□□ 0.53
CLCN2-222	ENST00000638134	ZCRB1	Q8TBF4	217 aa	Known RBP	18.35	■□□□□ 0.53
CLCN2-222	ENST00000638134	SHANK3	Q9BYB0	1731 aa		18.35	■□□□□ 0.53
CLCN2-222	ENST00000638134	TPM1	P09493	284 aa		18.34	■□□□□ 0.53
CLCN2-222	ENST00000638134	CCZ1B	P86790	482 aa		18.34	■□□□□ 0.53
CLCN2-222	ENST00000638134	CCZ1	P86791	482 aa	Predicted RBP	18.34	■□□□□ 0.53
CLCN2-222	ENST00000638134	AK7	Q96M32	723 aa		18.34	■□□□□ 0.53
CLCN2-222	ENST00000638134	LGR6	Q9HBX8	967 aa		18.34	■□□□□ 0.53
CLCN2-222	ENST00000638134	PKD1L3	Q7Z443	1732 aa		18.34	■□□□□ 0.53
CLCN2-222	ENST00000638134	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	18.34	■□□□□ 0.53
CLCN2-222	ENST00000638134	AMOT	Q4VCS5	1084 aa		18.34	■□□□□ 0.53
CLCN2-222	ENST00000638134	ARHGAP29	Q52LW3	1261 aa		18.34	■□□□□ 0.53
CLCN2-222	ENST00000638134	SMARCE1	Q969G3	411 aa		18.34	■□□□□ 0.53
CLCN2-222	ENST00000638134	CLSTN2	Q9H4D0	955 aa		18.34	■□□□□ 0.53
CLCN2-222	ENST00000638134	SPG7	Q9UQ90	795 aa		18.33	■□□□□ 0.52
CLCN2-222	ENST00000638134	THRAP3	Q9Y2W1	955 aa	Known RBP	18.33	■□□□□ 0.52
CLCN2-222	ENST00000638134		A0A1B0GUL7	405 aa		18.32	■□□□□ 0.52
CLCN2-222	ENST00000638134	BRD2	P25440	801 aa	Known RBP	18.32	■□□□□ 0.52
CLCN2-222	ENST00000638134	HDAC5	Q9UQL6	1122 aa		18.32	■□□□□ 0.52
CLCN2-222	ENST00000638134	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	18.32	■□□□□ 0.52
CLCN2-222	ENST00000638134	KAT6B	Q8WYB5	2073 aa		18.32	■□□□□ 0.52
CLCN2-222	ENST00000638134	CCDC69	A6NI79	296 aa		18.32	■□□□□ 0.52
CLCN2-222	ENST00000638134	GNAT3	A8MTJ3	354 aa		18.32	■□□□□ 0.52
CLCN2-222	ENST00000638134	ELL2	O00472	640 aa	Predicted RBP	18.32	■□□□□ 0.52
CLCN2-222	ENST00000638134	PHKG2	P15735	406 aa		18.32	■□□□□ 0.52
CLCN2-222	ENST00000638134	LIG1	P18858	919 aa		18.32	■□□□□ 0.52
CLCN2-222	ENST00000638134	KCNJ6	P48051	423 aa		18.32	■□□□□ 0.52
CLCN2-222	ENST00000638134	AK2	P54819	239 aa		18.32	■□□□□ 0.52
CLCN2-222	ENST00000638134	GSDMD	P57764	484 aa		18.32	■□□□□ 0.52
CLCN2-222	ENST00000638134	LMOD3	Q0VAK6	560 aa		18.32	■□□□□ 0.52
CLCN2-222	ENST00000638134	SNW1	Q13573	536 aa	Known RBP	18.32	■□□□□ 0.52
CLCN2-222	ENST00000638134	BARGIN	Q6ZT62	677 aa		18.32	■□□□□ 0.52
CLCN2-222	ENST00000638134	TTC6	Q86TZ1	520 aa		18.32	■□□□□ 0.52
CLCN2-222	ENST00000638134	C8orf58	Q8NAV2	365 aa		18.32	■□□□□ 0.52
CLCN2-222	ENST00000638134	IL17RE	Q8NFR9	667 aa		18.32	■□□□□ 0.52
CLCN2-222	ENST00000638134	EXOC4	Q96A65	974 aa		18.32	■□□□□ 0.52
CLCN2-222	ENST00000638134	MAP3K5	Q99683	1374 aa		18.32	■□□□□ 0.52
CLCN2-222	ENST00000638134	AOX1	Q06278	1338 aa		18.31	■□□□□ 0.52
CLCN2-222	ENST00000638134	TRIM66	O15016	1216 aa		18.31	■□□□□ 0.52
CLCN2-222	ENST00000638134	POLR3G	O15318	223 aa	Predicted RBP	18.31	■□□□□ 0.52
CLCN2-222	ENST00000638134	CAMK4	Q16566	473 aa		18.31	■□□□□ 0.52
CLCN2-222	ENST00000638134	C1orf141	Q5JVX7	400 aa		18.31	■□□□□ 0.52
CLCN2-222	ENST00000638134	RUFY3	Q7L099	469 aa		18.31	■□□□□ 0.52
CLCN2-222	ENST00000638134	ZBTB9	Q96C00	473 aa		18.31	■□□□□ 0.52
CLCN2-222	ENST00000638134	STAP2	Q9UGK3	403 aa		18.31	■□□□□ 0.52
CLCN2-222	ENST00000638134	RRP15	Q9Y3B9	282 aa	Known RBP	18.31	■□□□□ 0.52
CLCN2-222	ENST00000638134	PLEKHG2	Q9H7P9	1386 aa		18.31	■□□□□ 0.52
CLCN2-222	ENST00000638134	GOLGA6L19	H0YKK7	550 aa		18.31	■□□□□ 0.52
CLCN2-222	ENST00000638134	GJB2	P29033	226 aa		18.31	■□□□□ 0.52
CLCN2-222	ENST00000638134	ST5	P78524	1137 aa		18.31	■□□□□ 0.52
CLCN2-222	ENST00000638134	DDB1	Q16531	1140 aa		18.31	■□□□□ 0.52
CLCN2-222	ENST00000638134	AKAP4	Q5JQC9	854 aa		18.31	■□□□□ 0.52
CLCN2-222	ENST00000638134	FAM182B	Q5T319	152 aa		18.31	■□□□□ 0.52
CLCN2-222	ENST00000638134	POTEA	Q6S8J7	498 aa		18.31	■□□□□ 0.52
CLCN2-222	ENST00000638134	CKAP2L	Q8IYA6	745 aa		18.31	■□□□□ 0.52
CLCN2-222	ENST00000638134	ZSCAN31	Q96LW9	406 aa	Predicted RBP	18.31	■□□□□ 0.52
CLCN2-222	ENST00000638134	SRRT	Q9BXP5	876 aa	Known RBP	18.31	■□□□□ 0.52
CLCN2-222	ENST00000638134	DACT1	Q9NYF0	836 aa		18.31	■□□□□ 0.52
CLCN2-222	ENST00000638134	ORC3	Q9UBD5	711 aa	Predicted RBP	18.31	■□□□□ 0.52
CLCN2-222	ENST00000638134	EXOC5	O00471	708 aa		18.3	■□□□□ 0.52
CLCN2-222	ENST00000638134	DHX8	Q14562	1220 aa	Known RBP	18.3	■□□□□ 0.52
CLCN2-222	ENST00000638134	ZNF772	Q68DY9	489 aa	Predicted RBP	18.3	■□□□□ 0.52
CLCN2-222	ENST00000638134	SCAND2P	Q9GZW5	306 aa	Predicted RBP	18.3	■□□□□ 0.52
CLCN2-222	ENST00000638134	SH2B1	Q9NRF2	756 aa	Predicted RBP	18.3	■□□□□ 0.52
CLCN2-222	ENST00000638134	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	18.3	■□□□□ 0.52
CLCN2-222	ENST00000638134	LCMT1	Q9UIC8	334 aa		18.3	■□□□□ 0.52
CLCN2-222	ENST00000638134	LRRC37A3	O60309	1634 aa		18.3	■□□□□ 0.52
CLCN2-222	ENST00000638134	PSD	A5PKW4	1024 aa	Predicted RBP	18.29	■□□□□ 0.52
CLCN2-222	ENST00000638134	NPHP1	O15259	732 aa		18.29	■□□□□ 0.52
CLCN2-222	ENST00000638134	IFNL2	Q8IZJ0	200 aa		18.29	■□□□□ 0.52
CLCN2-222	ENST00000638134	UBXN4	Q92575	508 aa		18.29	■□□□□ 0.52
CLCN2-222	ENST00000638134	LOC102724159	A0A0B4J2E5	919 aa		18.29	■□□□□ 0.52
CLCN2-222	ENST00000638134	IVL	P07476	585 aa		18.29	■□□□□ 0.52
CLCN2-222	ENST00000638134	OAS2	P29728	719 aa	Known RBP	18.29	■□□□□ 0.52
CLCN2-222	ENST00000638134	PWP2	Q15269	919 aa	Known RBP	18.29	■□□□□ 0.52
CLCN2-222	ENST00000638134	TRMT1	Q9NXH9	659 aa	Known RBP	18.29	■□□□□ 0.52
CLCN2-222	ENST00000638134	SNX14	Q9Y5W7	946 aa		18.29	■□□□□ 0.52
CLCN2-222	ENST00000638134	PCDH11X	Q9BZA7	1347 aa		18.28	■□□□□ 0.52
CLCN2-222	ENST00000638134	PCDH11Y	Q9BZA8	1340 aa		18.28	■□□□□ 0.52
CLCN2-222	ENST00000638134	CAST	P20810	708 aa	Known RBP	18.28	■□□□□ 0.52
CLCN2-222	ENST00000638134	IQCB1	Q15051	598 aa		18.28	■□□□□ 0.52
CLCN2-222	ENST00000638134	RILPL2	Q969X0	211 aa		18.28	■□□□□ 0.52

Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms