RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 CDHR2Q9BYE9 1310 aa25.67■■□□□ 1.7
CLN6-224ENST00000638076 TMEM63CQ9P1W3 806 aa25.67■■□□□ 1.7
CLN6-224ENST00000638076 HELLSQ9NRZ9 838 aa25.66■■□□□ 1.7
CLN6-224ENST00000638076 AKAP2Q9Y2D5 859 aa25.66■■□□□ 1.7
CLN6-224ENST00000638076 TOB2Q14106 344 aaPredicted RBP25.66■■□□□ 1.7
CLN6-224ENST00000638076 F13A1P00488 732 aa25.65■■□□□ 1.7
CLN6-224ENST00000638076 CYP21A2P08686 494 aa25.65■■□□□ 1.7
CLN6-224ENST00000638076 TICAM2Q86XR7 235 aa25.65■■□□□ 1.7
CLN6-224ENST00000638076 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.65■■□□□ 1.7
CLN6-224ENST00000638076 XAGE2Q96GT9 111 aa25.65■■□□□ 1.7
CLN6-224ENST00000638076 NEK1Q96PY6 1258 aa25.65■■□□□ 1.7
CLN6-224ENST00000638076 WNK3Q9BYP7 1800 aa25.65■■□□□ 1.7
CLN6-224ENST00000638076 ADORA1P30542 326 aa25.64■■□□□ 1.7
CLN6-224ENST00000638076 CCDC158Q5M9N0 1113 aa25.64■■□□□ 1.7
CLN6-224ENST00000638076 ZMYM1Q5SVZ6 1142 aa25.64■■□□□ 1.7
CLN6-224ENST00000638076 GORABQ5T7V8 394 aa25.64■■□□□ 1.7
CLN6-224ENST00000638076 USP48Q86UV5 1035 aa25.64■■□□□ 1.7
CLN6-224ENST00000638076 TTLL11Q8NHH1 800 aa25.64■■□□□ 1.69
CLN6-224ENST00000638076 CDCA7Q9BWT1 371 aaPredicted RBP25.64■■□□□ 1.69
CLN6-224ENST00000638076 TBC1D2BQ9UPU7 963 aa25.64■■□□□ 1.69
CLN6-224ENST00000638076 SPATA31A1Q5TZJ5 1347 aa25.64■■□□□ 1.69
CLN6-224ENST00000638076 TTC39AQ5SRH9 613 aa25.63■■□□□ 1.69
CLN6-224ENST00000638076 IL6STP40189 918 aaPredicted RBP25.63■■□□□ 1.69
CLN6-224ENST00000638076 FKBP4Q02790 459 aaKnown RBP eCLIP25.63■■□□□ 1.69
CLN6-224ENST00000638076 DDB1Q16531 1140 aa25.63■■□□□ 1.69
CLN6-224ENST00000638076 DZIP3Q86Y13 1208 aaKnown RBP25.63■■□□□ 1.69
CLN6-224ENST00000638076 GREM2Q9H772 168 aa25.63■■□□□ 1.69
CLN6-224ENST00000638076 TRMT112Q9UI30 125 aaKnown RBP25.63■■□□□ 1.69
CLN6-224ENST00000638076 ITGA6P23229 1130 aa25.62■■□□□ 1.69
CLN6-224ENST00000638076 FAM43AQ8N2R8 423 aa25.62■■□□□ 1.69
CLN6-224ENST00000638076 MTMR6Q9Y217 621 aa25.62■■□□□ 1.69
CLN6-224ENST00000638076 DOT1LQ8TEK3 1739 aa25.62■■□□□ 1.69
CLN6-224ENST00000638076 A0A0G2JS52 829 aa25.62■■□□□ 1.69
CLN6-224ENST00000638076 IRS4O14654 1257 aaPredicted RBP25.62■■□□□ 1.69
CLN6-224ENST00000638076 RNF113AO15541 343 aaKnown RBP25.62■■□□□ 1.69
CLN6-224ENST00000638076 GADD45BO75293 160 aaPredicted RBP25.62■■□□□ 1.69
CLN6-224ENST00000638076 NASPP49321 788 aaPredicted RBP25.62■■□□□ 1.69
CLN6-224ENST00000638076 CTSWP56202 376 aa25.62■■□□□ 1.69
CLN6-224ENST00000638076 CNPY2Q9Y2B0 182 aa25.62■■□□□ 1.69
CLN6-224ENST00000638076 ERVV-1B6SEH8 477 aa25.61■■□□□ 1.69
CLN6-224ENST00000638076 THRAP3Q9Y2W1 955 aaKnown RBP25.61■■□□□ 1.69
CLN6-224ENST00000638076 ATP6V1DQ9Y5K8 247 aa25.61■■□□□ 1.69
CLN6-224ENST00000638076 LDHAL6AQ6ZMR3 332 aa25.6■■□□□ 1.69
CLN6-224ENST00000638076 TMEM87AQ8NBN3 555 aa25.6■■□□□ 1.69
CLN6-224ENST00000638076 DSCC1Q9BVC3 393 aa25.6■■□□□ 1.69
CLN6-224ENST00000638076 RIPOR2Q9Y4F9 1068 aa25.6■■□□□ 1.69
CLN6-224ENST00000638076 SPEF2Q9C093 1822 aa25.6■■□□□ 1.69
CLN6-224ENST00000638076 SYCE3A1L190 88 aa25.59■■□□□ 1.69
CLN6-224ENST00000638076 METTL24Q5JXM2 366 aa25.59■■□□□ 1.69
CLN6-224ENST00000638076 MAST3O60307 1309 aa25.59■■□□□ 1.69
CLN6-224ENST00000638076 ANKRD36CQ5JPF3 1778 aa25.59■■□□□ 1.69
CLN6-224ENST00000638076 ANKRD18BA2A2Z9 1011 aa25.59■■□□□ 1.69
CLN6-224ENST00000638076 STK3Q13188 491 aa25.59■■□□□ 1.69
CLN6-224ENST00000638076 ACSBG1Q96GR2 724 aa25.59■■□□□ 1.69
CLN6-224ENST00000638076 RIC1Q4ADV7 1423 aa25.58■■□□□ 1.69
CLN6-224ENST00000638076 UBN2Q6ZU65 1347 aa25.58■■□□□ 1.69
CLN6-224ENST00000638076 VPS37CA5D8V6 355 aaPredicted RBP25.58■■□□□ 1.69
CLN6-224ENST00000638076 TCHHQ07283 1943 aa25.58■■□□□ 1.69
CLN6-224ENST00000638076 HSPD1P10809 573 aaKnown RBP25.58■■□□□ 1.68
CLN6-224ENST00000638076 LARP1BQ659C4 914 aaKnown RBP25.58■■□□□ 1.68
CLN6-224ENST00000638076 Q6ZUG5 572 aa25.58■■□□□ 1.68
CLN6-224ENST00000638076 NUP98P52948 1817 aa25.57■■□□□ 1.68
CLN6-224ENST00000638076 SCARF1Q14162 830 aa25.57■■□□□ 1.68
CLN6-224ENST00000638076 ATP2B3Q16720 1220 aa25.57■■□□□ 1.68
CLN6-224ENST00000638076 LRSAM1Q6UWE0 723 aa25.57■■□□□ 1.68
CLN6-224ENST00000638076 STOX1Q6ZVD7 989 aa25.57■■□□□ 1.68
CLN6-224ENST00000638076 PDE8AO60658 829 aa25.57■■□□□ 1.68
CLN6-224ENST00000638076 CNNM1Q9NRU3 951 aa25.57■■□□□ 1.68
CLN6-224ENST00000638076 LTBP4Q8N2S1 1624 aa25.56■■□□□ 1.68
CLN6-224ENST00000638076 M0R2C6 588 aa25.56■■□□□ 1.68
CLN6-224ENST00000638076 ZNF34Q8IZ26 560 aa25.56■■□□□ 1.68
CLN6-224ENST00000638076 NRAPQ86VF7 1730 aa25.56■■□□□ 1.68
CLN6-224ENST00000638076 PHLPP1O60346 1717 aa25.56■■□□□ 1.68
CLN6-224ENST00000638076 NUTM2BA6NNL0 878 aaPredicted RBP25.55■■□□□ 1.68
CLN6-224ENST00000638076 NUTM2EB1AL46 878 aaPredicted RBP25.55■■□□□ 1.68
CLN6-224ENST00000638076 LRRFIP1Q32MZ4 808 aaKnown RBP25.55■■□□□ 1.68
CLN6-224ENST00000638076 NUTM2AQ8IVF1 878 aaPredicted RBP25.55■■□□□ 1.68
CLN6-224ENST00000638076 MARCH10Q8NA82 808 aaPredicted RBP25.55■■□□□ 1.68
CLN6-224ENST00000638076 OSBP2Q969R2 916 aa25.55■■□□□ 1.68
CLN6-224ENST00000638076 RBSNQ9H1K0 784 aa25.55■■□□□ 1.68
CLN6-224ENST00000638076 EIF5P55010 431 aaKnown RBP25.55■■□□□ 1.68
CLN6-224ENST00000638076 SYAP1Q96A49 352 aaPredicted RBP25.55■■□□□ 1.68
CLN6-224ENST00000638076 ATP6V1AP38606 617 aa25.54■■□□□ 1.68
CLN6-224ENST00000638076 ZAP70P43403 619 aa25.54■■□□□ 1.68
CLN6-224ENST00000638076 INTS5Q6P9B9 1019 aaKnown RBP25.54■■□□□ 1.68
CLN6-224ENST00000638076 FIBPO43427 364 aa25.54■■□□□ 1.68
CLN6-224ENST00000638076 HMGB1P09429 215 aaKnown RBP25.54■■□□□ 1.68
CLN6-224ENST00000638076 LRRC2Q9BYS8 371 aa25.54■■□□□ 1.68
CLN6-224ENST00000638076 CCDC87Q9NVE4 849 aa25.54■■□□□ 1.68
CLN6-224ENST00000638076 PDIA4P13667 645 aaKnown RBP25.53■■□□□ 1.68
CLN6-224ENST00000638076 PDCP20941 246 aa25.53■■□□□ 1.68
CLN6-224ENST00000638076 DNM1Q05193 864 aaKnown RBP25.53■■□□□ 1.68
CLN6-224ENST00000638076 PI16Q6UXB8 463 aa25.53■■□□□ 1.68
CLN6-224ENST00000638076 GTF3C6Q969F1 213 aa25.53■■□□□ 1.68
CLN6-224ENST00000638076 MYH3P11055 1940 aa25.53■■□□□ 1.68
CLN6-224ENST00000638076 HSP90B1P14625 803 aaKnown RBP25.53■■□□□ 1.68
CLN6-224ENST00000638076 CRKLP46109 303 aaKnown RBP25.53■■□□□ 1.68
CLN6-224ENST00000638076 SPATA31A5Q5VU36 1347 aa25.52■■□□□ 1.68
CLN6-224ENST00000638076 SPATA31A7Q8IWB4 1347 aa25.52■■□□□ 1.68
CLN6-224ENST00000638076 A0A0G2JLW4 131 aa25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms