RNA–Protein interactions for RNA: ENST00000637671.1

SYNGAP1-223, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 100 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-223ENST00000637671 TBC1D16Q8TBP0 767 aa15.33■□□□□ 0.04
SYNGAP1-223ENST00000637671 ZNF428Q96B54 188 aa15.33■□□□□ 0.04
SYNGAP1-223ENST00000637671 FAM89AQ96GI7 184 aa15.33■□□□□ 0.04
SYNGAP1-223ENST00000637671 CSRNP1Q96S65 589 aa15.33■□□□□ 0.04
SYNGAP1-223ENST00000637671 ZC3H12CQ9C0D7 883 aaKnown RBP15.33■□□□□ 0.04
SYNGAP1-223ENST00000637671 DDX60Q8IY21 1712 aaKnown RBP15.32■□□□□ 0.04
SYNGAP1-223ENST00000637671 FKBP1BP68106 108 aa15.32■□□□□ 0.04
SYNGAP1-223ENST00000637671 KCNQ5Q9NR82 932 aa15.32■□□□□ 0.04
SYNGAP1-223ENST00000637671 CHPF2Q9P2E5 772 aa15.32■□□□□ 0.04
SYNGAP1-223ENST00000637671 VIL1P09327 827 aaKnown RBP15.31■□□□□ 0.04
SYNGAP1-223ENST00000637671 HSP90B1P14625 803 aaKnown RBP15.31■□□□□ 0.04
SYNGAP1-223ENST00000637671 RPS8P62241 208 aaKnown RBP15.31■□□□□ 0.04
SYNGAP1-223ENST00000637671 PKN2Q16513 984 aaKnown RBP15.31■□□□□ 0.04
SYNGAP1-223ENST00000637671 ANKRD13DQ6ZTN6 518 aa15.31■□□□□ 0.04
SYNGAP1-223ENST00000637671 RASAL3Q86YV0 1011 aa15.31■□□□□ 0.04
SYNGAP1-223ENST00000637671 ANKIB1Q9P2G1 1089 aa15.31■□□□□ 0.04
SYNGAP1-223ENST00000637671 ATP5J2-PTCD1G3V325 749 aa15.3■□□□□ 0.04
SYNGAP1-223ENST00000637671 IRS4O14654 1257 aaPredicted RBP15.3■□□□□ 0.04
SYNGAP1-223ENST00000637671 ASTN2O75129 1339 aaPredicted RBP15.3■□□□□ 0.04
SYNGAP1-223ENST00000637671 UFL1O94874 794 aa15.3■□□□□ 0.04
SYNGAP1-223ENST00000637671 TAF1P21675 1872 aa15.3■□□□□ 0.04
SYNGAP1-223ENST00000637671 HDGFL1Q5TGJ6 251 aa15.3■□□□□ 0.04
SYNGAP1-223ENST00000637671 ANGEL2Q5VTE6 544 aaKnown RBP15.3■□□□□ 0.04
SYNGAP1-223ENST00000637671 AGBL3Q8NEM8 1001 aa15.3■□□□□ 0.04
SYNGAP1-223ENST00000637671 ISCA1Q9BUE6 129 aa15.3■□□□□ 0.04
SYNGAP1-223ENST00000637671 DBF4Q9UBU7 674 aaPredicted RBP15.3■□□□□ 0.04
SYNGAP1-223ENST00000637671 GGA1Q9UJY5 639 aa15.3■□□□□ 0.04
SYNGAP1-223ENST00000637671 HDAC9Q9UKV0 1011 aa15.3■□□□□ 0.04
SYNGAP1-223ENST00000637671 AKAP11Q9UKA4 1901 aa15.29■□□□□ 0.04
SYNGAP1-223ENST00000637671 TMPOP42166 694 aaKnown RBP15.29■□□□□ 0.04
SYNGAP1-223ENST00000637671 ZNF280AP59817 542 aaPredicted RBP15.29■□□□□ 0.04
SYNGAP1-223ENST00000637671 SCARF1Q14162 830 aa15.29■□□□□ 0.04
SYNGAP1-223ENST00000637671 RTL5Q5HYW3 569 aaPredicted RBP15.29■□□□□ 0.04
SYNGAP1-223ENST00000637671 RSBN1LQ6PCB5 846 aaPredicted RBP15.29■□□□□ 0.04
SYNGAP1-223ENST00000637671 PODXL2Q9NZ53 605 aa15.29■□□□□ 0.04
SYNGAP1-223ENST00000637671 HPS5Q9UPZ3 1129 aa15.29■□□□□ 0.04
SYNGAP1-223ENST00000637671 ZNF609O15014 1411 aa15.28■□□□□ 0.04
SYNGAP1-223ENST00000637671 PITPNM2Q9BZ72 1349 aa15.28■□□□□ 0.04
SYNGAP1-223ENST00000637671 HOXB7P09629 217 aa15.28■□□□□ 0.04
SYNGAP1-223ENST00000637671 KRT24Q2M2I5 525 aa15.28■□□□□ 0.04
SYNGAP1-223ENST00000637671 LAS1LQ9Y4W2 734 aaKnown RBP15.28■□□□□ 0.04
SYNGAP1-223ENST00000637671 PAPPA2Q9BXP8 1791 aa15.28■□□□□ 0.04
SYNGAP1-223ENST00000637671 CHL1O00533 1208 aa15.27■□□□□ 0.04
SYNGAP1-223ENST00000637671 USP17L8P0C7I0 530 aa15.27■□□□□ 0.04
SYNGAP1-223ENST00000637671 MYOZ2Q9NPC6 264 aa15.27■□□□□ 0.04
SYNGAP1-223ENST00000637671 HYPKQ9NX55 129 aa15.27■□□□□ 0.04
SYNGAP1-223ENST00000637671 GOLGA2Q08379 1002 aa15.26■□□□□ 0.03
SYNGAP1-223ENST00000637671 TRIM28Q13263 835 aaKnown RBP15.26■□□□□ 0.03
SYNGAP1-223ENST00000637671 TTLL12Q14166 644 aaPredicted RBP15.26■□□□□ 0.03
SYNGAP1-223ENST00000637671 NEUROD2Q15784 382 aa15.26■□□□□ 0.03
SYNGAP1-223ENST00000637671 CCDC152Q4G0S7 254 aa15.26■□□□□ 0.03
SYNGAP1-223ENST00000637671 POLR2AP24928 1970 aaKnown RBP15.25■□□□□ 0.03
SYNGAP1-223ENST00000637671 ZBTB38Q8NAP3 1195 aaPredicted RBP15.25■□□□□ 0.03
SYNGAP1-223ENST00000637671 ZNF296Q8WUU4 475 aaPredicted RBP15.25■□□□□ 0.03
SYNGAP1-223ENST00000637671 XDHP47989 1333 aa15.24■□□□□ 0.03
SYNGAP1-223ENST00000637671 USP17L3A6NCW0 530 aa15.24■□□□□ 0.03
SYNGAP1-223ENST00000637671 USP17L4A6NCW7 530 aa15.24■□□□□ 0.03
SYNGAP1-223ENST00000637671 TBC1D8O95759 1140 aa15.24■□□□□ 0.03
SYNGAP1-223ENST00000637671 NF2P35240 595 aa15.24■□□□□ 0.03
SYNGAP1-223ENST00000637671 USP17L1Q7RTZ2 530 aa15.24■□□□□ 0.03
SYNGAP1-223ENST00000637671 RIC3Q7Z5B4 369 aa15.24■□□□□ 0.03
SYNGAP1-223ENST00000637671 SEC31BQ9NQW1 1179 aa15.24■□□□□ 0.03
SYNGAP1-223ENST00000637671 COL4A1P02462 1669 aa15.24■□□□□ 0.03
SYNGAP1-223ENST00000637671 UBE2Q2LH0YL09 131 aa15.23■□□□□ 0.03
SYNGAP1-223ENST00000637671 SREBF2Q12772 1141 aa15.23■□□□□ 0.03
SYNGAP1-223ENST00000637671 NOM1Q5C9Z4 860 aaKnown RBP15.23■□□□□ 0.03
SYNGAP1-223ENST00000637671 PODNQ7Z5L7 613 aa15.23■□□□□ 0.03
SYNGAP1-223ENST00000637671 SCN9AQ15858 1988 aa15.23■□□□□ 0.03
SYNGAP1-223ENST00000637671 GPR25O00155 361 aa15.22■□□□□ 0.03
SYNGAP1-223ENST00000637671 ATP2B4P23634 1241 aa15.22■□□□□ 0.03
SYNGAP1-223ENST00000637671 FBXO46Q6PJ61 603 aaPredicted RBP15.22■□□□□ 0.03
SYNGAP1-223ENST00000637671 MOB2Q70IA6 237 aa15.22■□□□□ 0.03
SYNGAP1-223ENST00000637671 ANKRD18AQ8IVF6 992 aa15.22■□□□□ 0.03
SYNGAP1-223ENST00000637671 OGFOD1Q8N543 542 aa15.22■□□□□ 0.03
SYNGAP1-223ENST00000637671 GCC1Q96CN9 775 aa15.22■□□□□ 0.03
SYNGAP1-223ENST00000637671 GMLQ99445 158 aa15.22■□□□□ 0.03
SYNGAP1-223ENST00000637671 PDE8AO60658 829 aa15.21■□□□□ 0.03
SYNGAP1-223ENST00000637671 TM4SF4P48230 202 aa15.21■□□□□ 0.03
SYNGAP1-223ENST00000637671 RALBP1Q15311 655 aa15.21■□□□□ 0.03
SYNGAP1-223ENST00000637671 DUSP27Q5VZP5 1158 aa15.21■□□□□ 0.03
SYNGAP1-223ENST00000637671 CCDC146Q8IYE0 955 aa15.21■□□□□ 0.03
SYNGAP1-223ENST00000637671 PCCAP05165 728 aaPredicted RBP15.2■□□□□ 0.02
SYNGAP1-223ENST00000637671 MKRN3Q13064 507 aaKnown RBP15.2■□□□□ 0.02
SYNGAP1-223ENST00000637671 PRAMEF18Q5VWM3 479 aa15.2■□□□□ 0.02
SYNGAP1-223ENST00000637671 CCDC191Q8NCU4 936 aa15.2■□□□□ 0.02
SYNGAP1-223ENST00000637671 FBXW7Q969H0 707 aa15.2■□□□□ 0.02
SYNGAP1-223ENST00000637671 CCDC85AQ96PX6 553 aaPredicted RBP15.2■□□□□ 0.02
SYNGAP1-223ENST00000637671 CDC5LQ99459 802 aaKnown RBP15.2■□□□□ 0.02
SYNGAP1-223ENST00000637671 MYD88Q99836 296 aa15.2■□□□□ 0.02
SYNGAP1-223ENST00000637671 CWC25Q9NXE8 425 aaPredicted RBP15.2■□□□□ 0.02
SYNGAP1-223ENST00000637671 SCAF8Q9UPN6 1271 aaKnown RBP15.2■□□□□ 0.02
SYNGAP1-223ENST00000637671 MYO3BQ8WXR4 1341 aa15.19■□□□□ 0.02
SYNGAP1-223ENST00000637671 FKTNO75072 461 aa15.19■□□□□ 0.02
SYNGAP1-223ENST00000637671 NBPF9Q3BBW0 867 aa15.19■□□□□ 0.02
SYNGAP1-223ENST00000637671 ARMC9Q7Z3E5 817 aa15.19■□□□□ 0.02
SYNGAP1-223ENST00000637671 RUNDC1Q96C34 613 aa15.19■□□□□ 0.02
SYNGAP1-223ENST00000637671 TRIM35Q9UPQ4 493 aa15.19■□□□□ 0.02
SYNGAP1-223ENST00000637671 MMP14P50281 582 aa15.18■□□□□ 0.02
SYNGAP1-223ENST00000637671 WDR43Q15061 677 aaKnown RBP eCLIP15.18■□□□□ 0.02
SYNGAP1-223ENST00000637671 MED23Q9ULK4 1368 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms