RNA–Protein interactions for RNA: ENST00000637381.1

CTSD-210, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 374 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-210ENST00000637381 FMR1Q06787 632 aaKnown RBP eCLIP16.34■□□□□ 0.21
CTSD-210ENST00000637381 NEXNQ0ZGT2 675 aa16.34■□□□□ 0.21
CTSD-210ENST00000637381 TTLL11Q8NHH1 800 aa16.34■□□□□ 0.21
CTSD-210ENST00000637381 DBNDD1Q9H9R9 158 aa16.34■□□□□ 0.21
CTSD-210ENST00000637381 ECE2O60344 883 aa16.33■□□□□ 0.2
CTSD-210ENST00000637381 RPS12P25398 132 aaKnown RBP16.33■□□□□ 0.2
CTSD-210ENST00000637381 CTSWP56202 376 aa16.33■□□□□ 0.2
CTSD-210ENST00000637381 CWF19L2Q2TBE0 894 aaKnown RBP16.33■□□□□ 0.2
CTSD-210ENST00000637381 ZC3H12CQ9C0D7 883 aaKnown RBP16.33■□□□□ 0.2
CTSD-210ENST00000637381 KCNQ5Q9NR82 932 aa16.33■□□□□ 0.2
CTSD-210ENST00000637381 THSD7BQ9C0I4 1608 aa16.33■□□□□ 0.2
CTSD-210ENST00000637381 H7C1D1 291 aa16.32■□□□□ 0.2
CTSD-210ENST00000637381 TRAF5O00463 557 aa16.32■□□□□ 0.2
CTSD-210ENST00000637381 ZNF609O15014 1411 aa16.32■□□□□ 0.2
CTSD-210ENST00000637381 VIL1P09327 827 aaKnown RBP16.32■□□□□ 0.2
CTSD-210ENST00000637381 FLIIQ13045 1269 aa16.32■□□□□ 0.2
CTSD-210ENST00000637381 ANKRD18AQ8IVF6 992 aa16.32■□□□□ 0.2
CTSD-210ENST00000637381 PLA2G12BQ9BX93 195 aa16.32■□□□□ 0.2
CTSD-210ENST00000637381 WBP1LQ9NX94 342 aa16.32■□□□□ 0.2
CTSD-210ENST00000637381 GGA1Q9UJY5 639 aa16.32■□□□□ 0.2
CTSD-210ENST00000637381 ZBTB12Q9Y330 459 aaPredicted RBP16.32■□□□□ 0.2
CTSD-210ENST00000637381 XDHP47989 1333 aa16.31■□□□□ 0.2
CTSD-210ENST00000637381 WDR33Q9C0J8 1336 aaKnown RBP16.31■□□□□ 0.2
CTSD-210ENST00000637381 SHTN1A0MZ66 631 aa16.31■□□□□ 0.2
CTSD-210ENST00000637381 CASP7P55210 303 aa16.31■□□□□ 0.2
CTSD-210ENST00000637381 GCKRQ14397 625 aa16.31■□□□□ 0.2
CTSD-210ENST00000637381 DOK7Q18PE1 504 aa16.31■□□□□ 0.2
CTSD-210ENST00000637381 MICALL2Q8IY33 904 aa16.31■□□□□ 0.2
CTSD-210ENST00000637381 TRPM4Q8TD43 1214 aa16.31■□□□□ 0.2
CTSD-210ENST00000637381 GPR101Q96P66 508 aaPredicted RBP16.31■□□□□ 0.2
CTSD-210ENST00000637381 BSDC1Q9NW68 430 aaPredicted RBP16.31■□□□□ 0.2
CTSD-210ENST00000637381 ANKIB1Q9P2G1 1089 aa16.31■□□□□ 0.2
CTSD-210ENST00000637381 TLL2Q9Y6L7 1015 aa16.31■□□□□ 0.2
CTSD-210ENST00000637381 POLR2AP24928 1970 aaKnown RBP16.31■□□□□ 0.2
CTSD-210ENST00000637381 SPEF2Q9C093 1822 aa16.31■□□□□ 0.2
CTSD-210ENST00000637381 FOXN1O15353 648 aa16.3■□□□□ 0.2
CTSD-210ENST00000637381 UFL1O94874 794 aa16.3■□□□□ 0.2
CTSD-210ENST00000637381 EXOSC9Q06265 439 aaKnown RBP16.3■□□□□ 0.2
CTSD-210ENST00000637381 CDC37L1Q7L3B6 337 aa16.3■□□□□ 0.2
CTSD-210ENST00000637381 LINS1Q8NG48 757 aa16.3■□□□□ 0.2
CTSD-210ENST00000637381 HHIPL1Q96JK4 782 aa16.3■□□□□ 0.2
CTSD-210ENST00000637381 CCDC85AQ96PX6 553 aaPredicted RBP16.3■□□□□ 0.2
CTSD-210ENST00000637381 CDC5LQ99459 802 aaKnown RBP16.3■□□□□ 0.2
CTSD-210ENST00000637381 GREM2Q9H772 168 aa16.3■□□□□ 0.2
CTSD-210ENST00000637381 SPINK5Q9NQ38 1064 aaPredicted RBP16.3■□□□□ 0.2
CTSD-210ENST00000637381 ABT1Q9ULW3 272 aaKnown RBP16.3■□□□□ 0.2
CTSD-210ENST00000637381 CSF1RP07333 972 aa16.29■□□□□ 0.2
CTSD-210ENST00000637381 ATP2B4P23634 1241 aa16.29■□□□□ 0.2
CTSD-210ENST00000637381 DNAAF4Q8WXU2 420 aa16.29■□□□□ 0.2
CTSD-210ENST00000637381 GLIS2Q9BZE0 524 aaPredicted RBP16.29■□□□□ 0.2
CTSD-210ENST00000637381 MINPP1Q9UNW1 487 aa16.29■□□□□ 0.2
CTSD-210ENST00000637381 ZNF646O15015 1829 aaPredicted RBP16.29■□□□□ 0.2
CTSD-210ENST00000637381 EGFRP00533 1210 aa16.28■□□□□ 0.2
CTSD-210ENST00000637381 SAMD7Q7Z3H4 446 aa16.28■□□□□ 0.2
CTSD-210ENST00000637381 UBE3BQ7Z3V4 1068 aa16.28■□□□□ 0.2
CTSD-210ENST00000637381 SAPCD2Q86UD0 394 aa16.28■□□□□ 0.2
CTSD-210ENST00000637381 PRDM10Q9NQV6 1147 aa16.28■□□□□ 0.2
CTSD-210ENST00000637381 ECE1P42892 770 aa16.27■□□□□ 0.2
CTSD-210ENST00000637381 ZNF280AP59817 542 aaPredicted RBP16.27■□□□□ 0.2
CTSD-210ENST00000637381 FKBP5Q13451 457 aaPredicted RBP16.27■□□□□ 0.2
CTSD-210ENST00000637381 PODNQ7Z5L7 613 aa16.27■□□□□ 0.2
CTSD-210ENST00000637381 TNS4Q8IZW8 715 aa16.27■□□□□ 0.2
CTSD-210ENST00000637381 AGBL3Q8NEM8 1001 aa16.27■□□□□ 0.2
CTSD-210ENST00000637381 CAPNS2Q96L46 248 aa16.27■□□□□ 0.2
CTSD-210ENST00000637381 GMLQ99445 158 aa16.27■□□□□ 0.2
CTSD-210ENST00000637381 MYH16Q9H6N6 1097 aa16.27■□□□□ 0.2
CTSD-210ENST00000637381 SALL2Q9Y467 1007 aaPredicted RBP16.27■□□□□ 0.2
CTSD-210ENST00000637381 WTIPA6NIX2 430 aaPredicted RBP16.26■□□□□ 0.19
CTSD-210ENST00000637381 CELF2O95319 508 aaKnown RBP16.26■□□□□ 0.19
CTSD-210ENST00000637381 CTCFP49711 727 aaPredicted RBP16.26■□□□□ 0.19
CTSD-210ENST00000637381 MAP2K1Q02750 393 aaPredicted RBP16.26■□□□□ 0.19
CTSD-210ENST00000637381 MED23Q9ULK4 1368 aa16.26■□□□□ 0.19
CTSD-210ENST00000637381 ZNF521Q96K83 1311 aa16.25■□□□□ 0.19
CTSD-210ENST00000637381 MAP2K2P36507 400 aa16.25■□□□□ 0.19
CTSD-210ENST00000637381 TBC1D10BQ4KMP7 808 aaPredicted RBP16.25■□□□□ 0.19
CTSD-210ENST00000637381 BEND3Q5T5X7 828 aa16.25■□□□□ 0.19
CTSD-210ENST00000637381 RSBN1LQ6PCB5 846 aaPredicted RBP16.25■□□□□ 0.19
CTSD-210ENST00000637381 USP48Q86UV5 1035 aa16.25■□□□□ 0.19
CTSD-210ENST00000637381 G3V3G9 751 aa16.24■□□□□ 0.19
CTSD-210ENST00000637381 ITGA6P23229 1130 aa16.24■□□□□ 0.19
CTSD-210ENST00000637381 CCT4P50991 539 aaKnown RBP16.24■□□□□ 0.19
CTSD-210ENST00000637381 DCAF8Q5TAQ9 597 aa16.24■□□□□ 0.19
CTSD-210ENST00000637381 CYP4F22Q6NT55 531 aa16.24■□□□□ 0.19
CTSD-210ENST00000637381 FAM9BQ8IZU0 186 aa16.24■□□□□ 0.19
CTSD-210ENST00000637381 AIDAQ96BJ3 306 aa16.24■□□□□ 0.19
CTSD-210ENST00000637381 LEMD3Q9Y2U8 911 aa16.24■□□□□ 0.19
CTSD-210ENST00000637381 USP17L3A6NCW0 530 aa16.23■□□□□ 0.19
CTSD-210ENST00000637381 USP17L4A6NCW7 530 aa16.23■□□□□ 0.19
CTSD-210ENST00000637381 FOXO4P98177 505 aa16.23■□□□□ 0.19
CTSD-210ENST00000637381 USP17L1Q7RTZ2 530 aa16.23■□□□□ 0.19
CTSD-210ENST00000637381 IGHMBP2P38935 993 aaKnown RBP16.22■□□□□ 0.19
CTSD-210ENST00000637381 KIF4BQ2VIQ3 1234 aa16.22■□□□□ 0.19
CTSD-210ENST00000637381 KRT26Q7Z3Y9 468 aa16.22■□□□□ 0.19
CTSD-210ENST00000637381 DCPSQ96C86 337 aaKnown RBP16.22■□□□□ 0.19
CTSD-210ENST00000637381 ANKRD2Q9GZV1 360 aa16.22■□□□□ 0.19
CTSD-210ENST00000637381 A0A1B0GUL6 1792 aa16.21■□□□□ 0.19
CTSD-210ENST00000637381 F6X3S4 739 aa16.21■□□□□ 0.19
CTSD-210ENST00000637381 USP17L8P0C7I0 530 aa16.21■□□□□ 0.19
CTSD-210ENST00000637381 HSPA8P11142 646 aaKnown RBP16.21■□□□□ 0.19
CTSD-210ENST00000637381 FAM161AQ3B820 660 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms