RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 PNPLA7Q6ZV29 1317 aa18.75■□□□□ 0.59
CLN6-219ENST00000637329 SPEF2Q9C093 1822 aa18.75■□□□□ 0.59
CLN6-219ENST00000637329 TM4SF1P30408 202 aa18.75■□□□□ 0.59
CLN6-219ENST00000637329 IGHMBP2P38935 993 aaKnown RBP18.75■□□□□ 0.59
CLN6-219ENST00000637329 NLGN1Q8N2Q7 840 aa18.75■□□□□ 0.59
CLN6-219ENST00000637329 NLRP3Q96P20 1036 aa18.75■□□□□ 0.59
CLN6-219ENST00000637329 PUS3Q9BZE2 481 aaKnown RBP18.75■□□□□ 0.59
CLN6-219ENST00000637329 CNNM1Q9NRU3 951 aa18.75■□□□□ 0.59
CLN6-219ENST00000637329 RIPOR2Q9Y4F9 1068 aa18.75■□□□□ 0.59
CLN6-219ENST00000637329 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.75■□□□□ 0.59
CLN6-219ENST00000637329 A0A1B0GUL6 1792 aa18.75■□□□□ 0.59
CLN6-219ENST00000637329 AK9Q5TCS8 1911 aa18.74■□□□□ 0.59
CLN6-219ENST00000637329 SLC15A2Q16348 729 aa18.74■□□□□ 0.59
CLN6-219ENST00000637329 TSHZ3Q63HK5 1081 aa18.74■□□□□ 0.59
CLN6-219ENST00000637329 TBC1D9Q6ZT07 1266 aa18.74■□□□□ 0.59
CLN6-219ENST00000637329 CNTROBQ8N137 903 aa18.74■□□□□ 0.59
CLN6-219ENST00000637329 PDGFDQ9GZP0 370 aaPredicted RBP18.74■□□□□ 0.59
CLN6-219ENST00000637329 TLR7Q9NYK1 1049 aaKnown RBP18.74■□□□□ 0.59
CLN6-219ENST00000637329 DBNLQ9UJU6 430 aaKnown RBP18.74■□□□□ 0.59
CLN6-219ENST00000637329 NPHP1O15259 732 aa18.73■□□□□ 0.59
CLN6-219ENST00000637329 ST5P78524 1137 aa18.73■□□□□ 0.59
CLN6-219ENST00000637329 METTL24Q5JXM2 366 aa18.73■□□□□ 0.59
CLN6-219ENST00000637329 COL23A1Q86Y22 540 aaPredicted RBP18.73■□□□□ 0.59
CLN6-219ENST00000637329 VGLL2Q8N8G2 317 aa18.73■□□□□ 0.59
CLN6-219ENST00000637329 MPHOSPH8Q99549 860 aa18.73■□□□□ 0.59
CLN6-219ENST00000637329 CCDC8Q9H0W5 538 aaPredicted RBP18.73■□□□□ 0.59
CLN6-219ENST00000637329 RFX7Q2KHR2 1363 aa18.72■□□□□ 0.59
CLN6-219ENST00000637329 POLRMTO00411 1230 aaKnown RBP18.72■□□□□ 0.59
CLN6-219ENST00000637329 ATP5JP18859 108 aa18.72■□□□□ 0.59
CLN6-219ENST00000637329 PRR5LQ6MZQ0 368 aa18.72■□□□□ 0.59
CLN6-219ENST00000637329 A0A1B0GUL7 405 aa18.71■□□□□ 0.59
CLN6-219ENST00000637329 TRIM6-TRIM34B2RNG4 842 aa18.71■□□□□ 0.59
CLN6-219ENST00000637329 SERPINB2P05120 415 aa18.71■□□□□ 0.59
CLN6-219ENST00000637329 ANKRD18AQ8IVF6 992 aa18.71■□□□□ 0.59
CLN6-219ENST00000637329 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.71■□□□□ 0.59
CLN6-219ENST00000637329 SEC31BQ9NQW1 1179 aa18.71■□□□□ 0.59
CLN6-219ENST00000637329 PDE8BO95263 885 aa18.7■□□□□ 0.58
CLN6-219ENST00000637329 DDR1Q08345 913 aa18.7■□□□□ 0.58
CLN6-219ENST00000637329 PUM3Q15397 648 aaKnown RBP18.7■□□□□ 0.58
CLN6-219ENST00000637329 ATP2B3Q16720 1220 aa18.7■□□□□ 0.58
CLN6-219ENST00000637329 C3orf67Q6ZVT6 689 aa18.7■□□□□ 0.58
CLN6-219ENST00000637329 TICAM2Q86XR7 235 aa18.7■□□□□ 0.58
CLN6-219ENST00000637329 DBNDD2Q9BQY9 259 aa18.7■□□□□ 0.58
CLN6-219ENST00000637329 COL4A1P02462 1669 aa18.69■□□□□ 0.58
CLN6-219ENST00000637329 CRY2Q49AN0 593 aa18.69■□□□□ 0.58
CLN6-219ENST00000637329 EVI5LQ96CN4 794 aa18.69■□□□□ 0.58
CLN6-219ENST00000637329 BSDC1Q9NW68 430 aaPredicted RBP18.69■□□□□ 0.58
CLN6-219ENST00000637329 MSH5O43196 834 aa18.68■□□□□ 0.58
CLN6-219ENST00000637329 ANP32AP39687 249 aaKnown RBP18.68■□□□□ 0.58
CLN6-219ENST00000637329 DDX46Q7L014 1031 aaKnown RBP18.68■□□□□ 0.58
CLN6-219ENST00000637329 RILPL2Q969X0 211 aa18.68■□□□□ 0.58
CLN6-219ENST00000637329 SEC24BO95487 1268 aa18.67■□□□□ 0.58
CLN6-219ENST00000637329 LPIN2Q92539 896 aa18.67■□□□□ 0.58
CLN6-219ENST00000637329 TBC1D32Q96NH3 1257 aa18.67■□□□□ 0.58
CLN6-219ENST00000637329 NEUROD6Q96NK8 337 aa18.67■□□□□ 0.58
CLN6-219ENST00000637329 KLRG2A4D1S0 409 aaPredicted RBP18.66■□□□□ 0.58
CLN6-219ENST00000637329 HIP1O00291 1037 aa18.66■□□□□ 0.58
CLN6-219ENST00000637329 FGFR2P21802 821 aa18.66■□□□□ 0.58
CLN6-219ENST00000637329 CHMLP26374 656 aa18.66■□□□□ 0.58
CLN6-219ENST00000637329 MFAP1P55081 439 aaKnown RBP18.66■□□□□ 0.58
CLN6-219ENST00000637329 CCDC158Q5M9N0 1113 aa18.66■□□□□ 0.58
CLN6-219ENST00000637329 KLHL34Q8N239 644 aa18.66■□□□□ 0.58
CLN6-219ENST00000637329 ZNF512BQ96KM6 892 aaPredicted RBP18.66■□□□□ 0.58
CLN6-219ENST00000637329 HAUS7Q99871 368 aa18.66■□□□□ 0.58
CLN6-219ENST00000637329 ANKRD31Q8N7Z5 1873 aa18.66■□□□□ 0.58
CLN6-219ENST00000637329 LRRC37AA6NMS7 1700 aa18.66■□□□□ 0.58
CLN6-219ENST00000637329 REC8O95072 547 aa18.65■□□□□ 0.58
CLN6-219ENST00000637329 SLC5A1P13866 664 aa18.65■□□□□ 0.58
CLN6-219ENST00000637329 XAGE2Q96GT9 111 aa18.65■□□□□ 0.58
CLN6-219ENST00000637329 SGIP1Q9BQI5 828 aa18.65■□□□□ 0.58
CLN6-219ENST00000637329 EPB41L2O43491 1005 aaKnown RBP18.64■□□□□ 0.57
CLN6-219ENST00000637329 POLD1P28340 1107 aa18.64■□□□□ 0.57
CLN6-219ENST00000637329 TIMM10P62072 90 aa18.64■□□□□ 0.57
CLN6-219ENST00000637329 RPS8P62241 208 aaKnown RBP18.64■□□□□ 0.57
CLN6-219ENST00000637329 CHRNDQ07001 517 aa18.64■□□□□ 0.57
CLN6-219ENST00000637329 GRAPQ13588 217 aa18.64■□□□□ 0.57
CLN6-219ENST00000637329 GORABQ5T7V8 394 aa18.64■□□□□ 0.57
CLN6-219ENST00000637329 GRAPLQ8TC17 118 aaPredicted RBP18.64■□□□□ 0.57
CLN6-219ENST00000637329 PARP3Q9Y6F1 533 aa18.64■□□□□ 0.57
CLN6-219ENST00000637329 GRIN3BO60391 1043 aa18.63■□□□□ 0.57
CLN6-219ENST00000637329 MMP10P09238 476 aa18.63■□□□□ 0.57
CLN6-219ENST00000637329 IFIT1P09914 478 aaKnown RBP18.63■□□□□ 0.57
CLN6-219ENST00000637329 TTC39AQ5SRH9 613 aa18.63■□□□□ 0.57
CLN6-219ENST00000637329 RPGRQ92834 1020 aaKnown RBP18.63■□□□□ 0.57
CLN6-219ENST00000637329 CELF1Q92879 486 aaKnown RBP18.63■□□□□ 0.57
CLN6-219ENST00000637329 ESYT1Q9BSJ8 1104 aa18.63■□□□□ 0.57
CLN6-219ENST00000637329 BRIP1Q9BX63 1249 aa18.63■□□□□ 0.57
CLN6-219ENST00000637329 BOLA2Q9H3K6 86 aa18.63■□□□□ 0.57
CLN6-219ENST00000637329 RAD50Q92878 1312 aa18.63■□□□□ 0.57
CLN6-219ENST00000637329 HOXA10P31260 410 aaPredicted RBP18.62■□□□□ 0.57
CLN6-219ENST00000637329 RBM25P49756 843 aaKnown RBP18.62■□□□□ 0.57
CLN6-219ENST00000637329 TMC4Q7Z404 712 aa18.62■□□□□ 0.57
CLN6-219ENST00000637329 ANKRD2Q9GZV1 360 aa18.62■□□□□ 0.57
CLN6-219ENST00000637329 COL11A2P13942 1736 aaPredicted RBP18.62■□□□□ 0.57
CLN6-219ENST00000637329 MAP4K4O95819 1239 aaPredicted RBP18.61■□□□□ 0.57
CLN6-219ENST00000637329 UQCRFS1P1P0C7P4 283 aa18.61■□□□□ 0.57
CLN6-219ENST00000637329 ARID4AP29374 1257 aaPredicted RBP18.61■□□□□ 0.57
CLN6-219ENST00000637329 ADORA1P30542 326 aa18.61■□□□□ 0.57
CLN6-219ENST00000637329 UBE4AQ14139 1066 aa18.61■□□□□ 0.57
CLN6-219ENST00000637329 CCDC24Q8N4L8 307 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms