RNA–Protein interactions for RNA: ENST00000636520.1

CLN5-210, Transcript of CLN5, intracellular trafficking protein, humanhuman

Gene CLN5, Length 5,889 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-210ENST00000636520 KIF5BP33176 963 aa8.16□□□□□ -1.1
CLN5-210ENST00000636520 DOK7Q18PE1 504 aa8.16□□□□□ -1.1
CLN5-210ENST00000636520 PODNQ7Z5L7 613 aa8.16□□□□□ -1.1
CLN5-210ENST00000636520 FAM193BQ96PV7 902 aaPredicted RBP8.16□□□□□ -1.1
CLN5-210ENST00000636520 RIMS1Q86UR5 1692 aaKnown RBP8.16□□□□□ -1.1
CLN5-210ENST00000636520 PRC1O43663 620 aa8.16□□□□□ -1.1
CLN5-210ENST00000636520 RAB3GAP1Q15042 981 aa8.16□□□□□ -1.1
CLN5-210ENST00000636520 MFSD14BQ5SR56 506 aa8.16□□□□□ -1.1
CLN5-210ENST00000636520 ARRDC4Q8NCT1 418 aa8.16□□□□□ -1.1
CLN5-210ENST00000636520 VSIG10Q8N0Z9 540 aa8.16□□□□□ -1.1
CLN5-210ENST00000636520 ZNF341Q9BYN7 854 aa8.16□□□□□ -1.1
CLN5-210ENST00000636520 HOOK1Q9UJC3 728 aaKnown RBP8.16□□□□□ -1.1
CLN5-210ENST00000636520 C1orf167Q5SNV9 1468 aa8.16□□□□□ -1.1
CLN5-210ENST00000636520 CARMIL3Q8ND23 1372 aa8.16□□□□□ -1.1
CLN5-210ENST00000636520 CT47B1P0C2W7 299 aaPredicted RBP8.16□□□□□ -1.1
CLN5-210ENST00000636520 TPD52L1Q16890 204 aaPredicted RBP8.16□□□□□ -1.1
CLN5-210ENST00000636520 DZIP1LQ8IYY4 767 aaKnown RBP8.16□□□□□ -1.1
CLN5-210ENST00000636520 SAMM50Q9Y512 469 aa8.16□□□□□ -1.1
CLN5-210ENST00000636520 CCDC196A0A1B0GTZ2 297 aa8.15□□□□□ -1.1
CLN5-210ENST00000636520 RANBP6O60518 1105 aaKnown RBP8.15□□□□□ -1.1
CLN5-210ENST00000636520 TRPA1O75762 1119 aa8.15□□□□□ -1.1
CLN5-210ENST00000636520 TPM4P67936 248 aa8.15□□□□□ -1.1
CLN5-210ENST00000636520 GOPCQ9HD26 462 aa8.15□□□□□ -1.1
CLN5-210ENST00000636520 DIP2BQ9P265 1576 aa8.15□□□□□ -1.1
CLN5-210ENST00000636520 CNOT7Q9UIV1 285 aaKnown RBP8.15□□□□□ -1.1
CLN5-210ENST00000636520 DKC1O60832 514 aaKnown RBP eCLIP8.15□□□□□ -1.1
CLN5-210ENST00000636520 BAG4O95429 457 aaKnown RBP8.15□□□□□ -1.1
CLN5-210ENST00000636520 SNAPC2Q13487 334 aa8.15□□□□□ -1.1
CLN5-210ENST00000636520 STYK1Q6J9G0 422 aa8.15□□□□□ -1.1
CLN5-210ENST00000636520 NBPF10Q6P3W6 841 aaKnown RBP8.15□□□□□ -1.1
CLN5-210ENST00000636520 ZNF277Q9NRM2 450 aaPredicted RBP8.15□□□□□ -1.1
CLN5-210ENST00000636520 BABAM1Q9NWV8 329 aa8.15□□□□□ -1.1
CLN5-210ENST00000636520 RTEL1Q9NZ71 1219 aa8.15□□□□□ -1.1
CLN5-210ENST00000636520 ERBB3P21860 1342 aa8.15□□□□□ -1.1
CLN5-210ENST00000636520 IL15P40933 162 aaPredicted RBP8.15□□□□□ -1.1
CLN5-210ENST00000636520 CT47A1Q5JQC4 288 aaPredicted RBP8.15□□□□□ -1.1
CLN5-210ENST00000636520 PLBD2Q8NHP8 589 aa8.15□□□□□ -1.1
CLN5-210ENST00000636520 CHURC1Q8WUH1 139 aa8.15□□□□□ -1.1
CLN5-210ENST00000636520 ARHGAP31Q2M1Z3 1444 aa8.15□□□□□ -1.11
CLN5-210ENST00000636520 CYP7A1P22680 504 aa8.15□□□□□ -1.11
CLN5-210ENST00000636520 KCNG4Q8TDN1 519 aa8.15□□□□□ -1.11
CLN5-210ENST00000636520 RAB34Q9BZG1 259 aa8.15□□□□□ -1.11
CLN5-210ENST00000636520 DDX21Q9NR30 783 aaKnown RBP eCLIP8.15□□□□□ -1.11
CLN5-210ENST00000636520 MSRAQ9UJ68 235 aa8.15□□□□□ -1.11
CLN5-210ENST00000636520 SOS1Q07889 1333 aaPredicted RBP8.15□□□□□ -1.11
CLN5-210ENST00000636520 NCAPG2Q86XI2 1143 aa8.14□□□□□ -1.11
CLN5-210ENST00000636520 MICALL1Q8N3F8 863 aa8.14□□□□□ -1.11
CLN5-210ENST00000636520 ADD3Q9UEY8 706 aaKnown RBP8.14□□□□□ -1.11
CLN5-210ENST00000636520 MAP3K2Q9Y2U5 619 aa8.14□□□□□ -1.11
CLN5-210ENST00000636520 ZCCHC11Q5TAX3 1644 aaKnown RBP8.14□□□□□ -1.11
CLN5-210ENST00000636520 ALDH1L1O75891 902 aa8.14□□□□□ -1.11
CLN5-210ENST00000636520 PSMA5P28066 241 aa8.14□□□□□ -1.11
CLN5-210ENST00000636520 CCDC82Q8N4S0 544 aa8.14□□□□□ -1.11
CLN5-210ENST00000636520 AZI2Q9H6S1 392 aa8.14□□□□□ -1.11
CLN5-210ENST00000636520 STX8Q9UNK0 236 aa8.14□□□□□ -1.11
CLN5-210ENST00000636520 TCP10L2B9ZVM9 353 aa8.14□□□□□ -1.11
CLN5-210ENST00000636520 TSPY3P0CV98 308 aa8.14□□□□□ -1.11
CLN5-210ENST00000636520 TSPY8P0CW00 308 aa8.14□□□□□ -1.11
CLN5-210ENST00000636520 NONOQ15233 471 aaKnown RBP eCLIP8.14□□□□□ -1.11
CLN5-210ENST00000636520 PKN2Q16513 984 aaKnown RBP8.14□□□□□ -1.11
CLN5-210ENST00000636520 ANKRD35Q8N283 1001 aa8.14□□□□□ -1.11
CLN5-210ENST00000636520 ANKRD20A12PQ8NF67 263 aa8.14□□□□□ -1.11
CLN5-210ENST00000636520 RBM46Q8TBY0 533 aaKnown RBP8.14□□□□□ -1.11
CLN5-210ENST00000636520 IFT57Q9NWB7 429 aa8.14□□□□□ -1.11
CLN5-210ENST00000636520 GNAQP50148 359 aa8.14□□□□□ -1.11
CLN5-210ENST00000636520 EIF4A2Q14240 407 aaKnown RBP8.14□□□□□ -1.11
CLN5-210ENST00000636520 AACSQ86V21 672 aa8.14□□□□□ -1.11
CLN5-210ENST00000636520 COA1Q9GZY4 146 aa8.14□□□□□ -1.11
CLN5-210ENST00000636520 PDCL3Q9H2J4 239 aa8.14□□□□□ -1.11
CLN5-210ENST00000636520 NOC2LQ9Y3T9 749 aaKnown RBP8.14□□□□□ -1.11
CLN5-210ENST00000636520 COL17A1Q9UMD9 1497 aaPredicted RBP8.14□□□□□ -1.11
CLN5-210ENST00000636520 USP50Q70EL3 339 aaPredicted RBP8.14□□□□□ -1.11
CLN5-210ENST00000636520 EDC4Q6P2E9 1401 aaKnown RBP8.14□□□□□ -1.11
CLN5-210ENST00000636520 TIAM1Q13009 1591 aa8.14□□□□□ -1.11
CLN5-210ENST00000636520 EVI5O60447 810 aa8.13□□□□□ -1.11
CLN5-210ENST00000636520 REC8O95072 547 aa8.13□□□□□ -1.11
CLN5-210ENST00000636520 RGS3P49796 1198 aa8.13□□□□□ -1.11
CLN5-210ENST00000636520 MAP3K11Q16584 847 aa8.13□□□□□ -1.11
CLN5-210ENST00000636520 AAK1Q2M2I8 961 aa8.13□□□□□ -1.11
CLN5-210ENST00000636520 INTS3Q68E01 1043 aaKnown RBP8.13□□□□□ -1.11
CLN5-210ENST00000636520 PODXL2Q9NZ53 605 aa8.13□□□□□ -1.11
CLN5-210ENST00000636520 IQSEC2Q5JU85 1478 aa8.13□□□□□ -1.11
CLN5-210ENST00000636520 RNF123Q5XPI4 1314 aa8.13□□□□□ -1.11
CLN5-210ENST00000636520 ANKRD45Q5TZF3 282 aa8.13□□□□□ -1.11
CLN5-210ENST00000636520 KSR2Q6VAB6 950 aa8.13□□□□□ -1.11
CLN5-210ENST00000636520 ARHGEF1Q92888 912 aaKnown RBP8.13□□□□□ -1.11
CLN5-210ENST00000636520 KAT14Q9H8E8 782 aa8.13□□□□□ -1.11
CLN5-210ENST00000636520 PRPF40BQ6NWY9 871 aaKnown RBP8.13□□□□□ -1.11
CLN5-210ENST00000636520 USP40Q9NVE5 1235 aa8.13□□□□□ -1.11
CLN5-210ENST00000636520 A1BGP04217 495 aa8.13□□□□□ -1.11
CLN5-210ENST00000636520 CCDC150Q8NCX0 1101 aa8.13□□□□□ -1.11
CLN5-210ENST00000636520 RAB23Q9ULC3 237 aa8.13□□□□□ -1.11
CLN5-210ENST00000636520 ASAP1Q9ULH1 1129 aa8.13□□□□□ -1.11
CLN5-210ENST00000636520 NOL7Q9UMY1 257 aaKnown RBP8.13□□□□□ -1.11
CLN5-210ENST00000636520 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.13□□□□□ -1.11
CLN5-210ENST00000636520 BACH1O14867 736 aa8.13□□□□□ -1.11
CLN5-210ENST00000636520 GTF2A2P52657 109 aa8.13□□□□□ -1.11
CLN5-210ENST00000636520 IMMTQ16891 758 aaKnown RBP8.13□□□□□ -1.11
CLN5-210ENST00000636520 ANKRD13AQ8IZ07 590 aa8.13□□□□□ -1.11
CLN5-210ENST00000636520 LINS1Q8NG48 757 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms