RNA–Protein interactions for RNA: ENST00000636512.1

GABRB3-220, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 99 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-220ENST00000636512 USPL1Q5W0Q7 1092 aa2.35□□□□□ -2.03
GABRB3-220ENST00000636512 PPP4R4Q6NUP7 873 aa2.35□□□□□ -2.03
GABRB3-220ENST00000636512 POTEEQ6S8J3 1075 aa2.35□□□□□ -2.03
GABRB3-220ENST00000636512 PI16Q6UXB8 463 aa2.35□□□□□ -2.03
GABRB3-220ENST00000636512 DTHD1Q6ZMT9 781 aa2.35□□□□□ -2.03
GABRB3-220ENST00000636512 BICDL1Q6ZP65 573 aa2.35□□□□□ -2.03
GABRB3-220ENST00000636512 SV2BQ7L1I2 683 aa2.35□□□□□ -2.03
GABRB3-220ENST00000636512 WDR75Q8IWA0 830 aaKnown RBP2.35□□□□□ -2.03
GABRB3-220ENST00000636512 SYNPOQ8N3V7 929 aa2.35□□□□□ -2.03
GABRB3-220ENST00000636512 OR6P1Q8NGX9 317 aa2.35□□□□□ -2.03
GABRB3-220ENST00000636512 CEP44Q9C0F1 390 aa2.35□□□□□ -2.03
GABRB3-220ENST00000636512 RBSNQ9H1K0 784 aa2.35□□□□□ -2.03
GABRB3-220ENST00000636512 SUV39H2Q9H5I1 410 aa2.35□□□□□ -2.03
GABRB3-220ENST00000636512 ELP3Q9H9T3 547 aa2.35□□□□□ -2.03
GABRB3-220ENST00000636512 ST7Q9NRC1 585 aa2.35□□□□□ -2.03
GABRB3-220ENST00000636512 ACTR10Q9NZ32 417 aa2.35□□□□□ -2.03
GABRB3-220ENST00000636512 BCCIPQ9P287 314 aaKnown RBP eCLIP2.35□□□□□ -2.03
GABRB3-220ENST00000636512 GABBR1Q9UBS5 961 aa2.35□□□□□ -2.03
GABRB3-220ENST00000636512 FOXD3Q9UJU5 478 aaPredicted RBP2.35□□□□□ -2.03
GABRB3-220ENST00000636512 GJA3Q9Y6H8 435 aa2.35□□□□□ -2.03
GABRB3-220ENST00000636512 FAM221BA6H8Z2 402 aa2.34□□□□□ -2.03
GABRB3-220ENST00000636512 FAM205CA6NFA0 338 aa2.34□□□□□ -2.03
GABRB3-220ENST00000636512 PHF20L1A8MW92 1017 aa2.34□□□□□ -2.03
GABRB3-220ENST00000636512 ALG1L2C9J202 215 aa2.34□□□□□ -2.03
GABRB3-220ENST00000636512 F6X3S4 739 aa2.34□□□□□ -2.03
GABRB3-220ENST00000636512 TGFBR3LH3BV60 316 aa2.34□□□□□ -2.03
GABRB3-220ENST00000636512 SMAD7O15105 426 aaKnown RBP2.34□□□□□ -2.03
GABRB3-220ENST00000636512 CREB3O43889 395 aa2.34□□□□□ -2.03
GABRB3-220ENST00000636512 CAND2O75155 1236 aa2.34□□□□□ -2.03
GABRB3-220ENST00000636512 DDAH1O94760 285 aa2.34□□□□□ -2.03
GABRB3-220ENST00000636512 CD2BP2O95400 341 aaKnown RBP2.34□□□□□ -2.03
GABRB3-220ENST00000636512 S1PR4O95977 384 aa2.34□□□□□ -2.03
GABRB3-220ENST00000636512 IL2RAP01589 272 aa2.34□□□□□ -2.03
GABRB3-220ENST00000636512 POLR3DP05423 398 aaPredicted RBP2.34□□□□□ -2.03
GABRB3-220ENST00000636512 KRT18P05783 430 aaKnown RBP2.34□□□□□ -2.03
GABRB3-220ENST00000636512 IMPDH2P12268 514 aa2.34□□□□□ -2.03
GABRB3-220ENST00000636512 EDN3P14138 238 aa2.34□□□□□ -2.03
GABRB3-220ENST00000636512 MASP1P48740 699 aa2.34□□□□□ -2.03
GABRB3-220ENST00000636512 ZNF165P49910 485 aa2.34□□□□□ -2.03
GABRB3-220ENST00000636512 IDH3AP50213 366 aa2.34□□□□□ -2.03
GABRB3-220ENST00000636512 LSM11P83369 360 aaKnown RBP eCLIP2.34□□□□□ -2.03
GABRB3-220ENST00000636512 EXOSC10Q01780 885 aaKnown RBP2.34□□□□□ -2.03
GABRB3-220ENST00000636512 FAM160A1Q05DH4 1040 aa2.34□□□□□ -2.03
GABRB3-220ENST00000636512 RASGRF1Q13972 1273 aa2.34□□□□□ -2.03
GABRB3-220ENST00000636512 RASA3Q14644 834 aa2.34□□□□□ -2.03
GABRB3-220ENST00000636512 BRD3Q15059 726 aa2.34□□□□□ -2.03
GABRB3-220ENST00000636512 PPP2R5EQ16537 467 aa2.34□□□□□ -2.03
GABRB3-220ENST00000636512 CWF19L2Q2TBE0 894 aaKnown RBP2.34□□□□□ -2.03
GABRB3-220ENST00000636512 HSP90AB4PQ58FF6 505 aa2.34□□□□□ -2.03
GABRB3-220ENST00000636512 PCNX4Q63HM2 1172 aa2.34□□□□□ -2.03
GABRB3-220ENST00000636512 LARP1BQ659C4 914 aaKnown RBP2.34□□□□□ -2.03
GABRB3-220ENST00000636512 ANKRD13DQ6ZTN6 518 aa2.34□□□□□ -2.03
GABRB3-220ENST00000636512 GALNT12Q8IXK2 581 aa2.34□□□□□ -2.03
GABRB3-220ENST00000636512 GOLM1Q8NBJ4 401 aa2.34□□□□□ -2.03
GABRB3-220ENST00000636512 RHBDD1Q8TEB9 315 aa2.34□□□□□ -2.03
GABRB3-220ENST00000636512 THAP3Q8WTV1 239 aaPredicted RBP2.34□□□□□ -2.03
GABRB3-220ENST00000636512 CHAC2Q8WUX2 184 aa2.34□□□□□ -2.03
GABRB3-220ENST00000636512 UBE2Q2Q8WVN8 375 aa2.34□□□□□ -2.03
GABRB3-220ENST00000636512 EAF1Q96JC9 268 aaPredicted RBP2.34□□□□□ -2.03
GABRB3-220ENST00000636512 C8orf48Q96LL4 319 aa2.34□□□□□ -2.03
GABRB3-220ENST00000636512 IPO9Q96P70 1041 aaKnown RBP2.34□□□□□ -2.03
GABRB3-220ENST00000636512 CDK15Q96Q40 435 aa2.34□□□□□ -2.03
GABRB3-220ENST00000636512 MTRQ99707 1265 aa2.34□□□□□ -2.03
GABRB3-220ENST00000636512 UBA5Q9GZZ9 404 aa2.34□□□□□ -2.03
GABRB3-220ENST00000636512 TMEM260Q9NX78 707 aa2.34□□□□□ -2.03
GABRB3-220ENST00000636512 ADAMTS1Q9UHI8 967 aa2.34□□□□□ -2.03
GABRB3-220ENST00000636512 MCM8Q9UJA3 840 aa2.34□□□□□ -2.03
GABRB3-220ENST00000636512 PPM1HQ9ULR3 514 aa2.34□□□□□ -2.03
GABRB3-220ENST00000636512 PLAAQ9Y263 795 aa2.34□□□□□ -2.03
GABRB3-220ENST00000636512 SAMM50Q9Y512 469 aa2.34□□□□□ -2.03
GABRB3-220ENST00000636512 GPC6Q9Y625 555 aaPredicted RBP2.34□□□□□ -2.03
GABRB3-220ENST00000636512 KDM2BQ8NHM5 1336 aa2.34□□□□□ -2.04
GABRB3-220ENST00000636512 ROBO2Q9HCK4 1378 aa2.34□□□□□ -2.04
GABRB3-220ENST00000636512 SH3BP5O60239 455 aa2.33□□□□□ -2.04
GABRB3-220ENST00000636512 ASMTLO95671 621 aa2.33□□□□□ -2.04
GABRB3-220ENST00000636512 BPNT1O95861 308 aa2.33□□□□□ -2.04
GABRB3-220ENST00000636512 ADH1CP00326 375 aa2.33□□□□□ -2.04
GABRB3-220ENST00000636512 PF4P02776 101 aa2.33□□□□□ -2.04
GABRB3-220ENST00000636512 APPP05067 770 aa2.33□□□□□ -2.04
GABRB3-220ENST00000636512 ADH1AP07327 375 aa2.33□□□□□ -2.04
GABRB3-220ENST00000636512 ADD1P35611 737 aaKnown RBP2.33□□□□□ -2.04
GABRB3-220ENST00000636512 SOX5P35711 763 aa2.33□□□□□ -2.04
GABRB3-220ENST00000636512 GRM5P41594 1212 aa2.33□□□□□ -2.04
GABRB3-220ENST00000636512 PLA2G4AP47712 749 aa2.33□□□□□ -2.04
GABRB3-220ENST00000636512 TBX4P57082 545 aa2.33□□□□□ -2.04
GABRB3-220ENST00000636512 NFKB2Q00653 900 aa2.33□□□□□ -2.04
GABRB3-220ENST00000636512 LMNB2Q03252 620 aa2.33□□□□□ -2.04
GABRB3-220ENST00000636512 TRIM32Q13049 653 aa2.33□□□□□ -2.04
GABRB3-220ENST00000636512 CBLBQ13191 982 aa2.33□□□□□ -2.04
GABRB3-220ENST00000636512 CLN3Q13286 438 aa2.33□□□□□ -2.04
GABRB3-220ENST00000636512 CAMK2GQ13555 558 aaPredicted RBP2.33□□□□□ -2.04
GABRB3-220ENST00000636512 GRM2Q14416 872 aa2.33□□□□□ -2.04
GABRB3-220ENST00000636512 RALBP1Q15311 655 aa2.33□□□□□ -2.04
GABRB3-220ENST00000636512 ZRSR2Q15696 482 aaKnown RBP2.33□□□□□ -2.04
GABRB3-220ENST00000636512 DDR2Q16832 855 aa2.33□□□□□ -2.04
GABRB3-220ENST00000636512 SEZ6Q53EL9 994 aa2.33□□□□□ -2.04
GABRB3-220ENST00000636512 C2orf27AQ580R0 203 aa2.33□□□□□ -2.04
GABRB3-220ENST00000636512 FAM26DQ5JW98 314 aa2.33□□□□□ -2.04
GABRB3-220ENST00000636512 SH3PXD2AQ5TCZ1 1133 aa2.33□□□□□ -2.04
GABRB3-220ENST00000636512 KIAA0319Q5VV43 1072 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms