RNA–Protein interactions for RNA: ENST00000636466.1

GABRB3-219, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-219ENST00000636466 PLEKHG3A1L390 1219 aa16.4■□□□□ 0.22
GABRB3-219ENST00000636466 KIF18AQ8NI77 898 aa16.4■□□□□ 0.22
GABRB3-219ENST00000636466 PRDM10Q9NQV6 1147 aa16.4■□□□□ 0.22
GABRB3-219ENST00000636466 PDE4BQ07343 736 aa16.4■□□□□ 0.22
GABRB3-219ENST00000636466 STX1AQ16623 288 aa16.4■□□□□ 0.22
GABRB3-219ENST00000636466 CCDC186Q7Z3E2 898 aa16.4■□□□□ 0.22
GABRB3-219ENST00000636466 NSFL1CQ9UNZ2 370 aaKnown RBP16.4■□□□□ 0.22
GABRB3-219ENST00000636466 ZFYP08048 801 aaPredicted RBP16.39■□□□□ 0.21
GABRB3-219ENST00000636466 PRKCSHP14314 528 aaPredicted RBP16.39■□□□□ 0.21
GABRB3-219ENST00000636466 CBX1P83916 185 aa16.39■□□□□ 0.21
GABRB3-219ENST00000636466 NAA16Q6N069 864 aaPredicted RBP16.39■□□□□ 0.21
GABRB3-219ENST00000636466 ZBTB9Q96C00 473 aa16.39■□□□□ 0.21
GABRB3-219ENST00000636466 TTC41PQ6P2S7 1318 aa16.39■□□□□ 0.21
GABRB3-219ENST00000636466 RBM25P49756 843 aaKnown RBP16.39■□□□□ 0.21
GABRB3-219ENST00000636466 TAF3Q5VWG9 929 aa16.39■□□□□ 0.21
GABRB3-219ENST00000636466 SUCLG2Q96I99 432 aa16.39■□□□□ 0.21
GABRB3-219ENST00000636466 NUP88Q99567 741 aaPredicted RBP16.39■□□□□ 0.21
GABRB3-219ENST00000636466 LUC7LQ9NQ29 371 aaKnown RBP16.39■□□□□ 0.21
GABRB3-219ENST00000636466 ZSCAN16Q9H4T2 348 aaPredicted RBP16.38■□□□□ 0.21
GABRB3-219ENST00000636466 CDR1P51861 262 aa16.38■□□□□ 0.21
GABRB3-219ENST00000636466 SETQ01105 290 aaPredicted RBP16.38■□□□□ 0.21
GABRB3-219ENST00000636466 TRPM2O94759 1503 aa16.38■□□□□ 0.21
GABRB3-219ENST00000636466 BAG3O95817 575 aa16.38■□□□□ 0.21
GABRB3-219ENST00000636466 LMOD1P29536 600 aaPredicted RBP16.38■□□□□ 0.21
GABRB3-219ENST00000636466 WDR78Q5VTH9 848 aa16.38■□□□□ 0.21
GABRB3-219ENST00000636466 SPTY2D1Q68D10 685 aaPredicted RBP16.38■□□□□ 0.21
GABRB3-219ENST00000636466 CACNA2D4Q7Z3S7 1137 aa16.38■□□□□ 0.21
GABRB3-219ENST00000636466 MAGEB6Q8N7X4 407 aa16.38■□□□□ 0.21
GABRB3-219ENST00000636466 CCDC102AQ96A19 550 aa16.38■□□□□ 0.21
GABRB3-219ENST00000636466 CCDC171Q6TFL3 1326 aa16.38■□□□□ 0.21
GABRB3-219ENST00000636466 A0A1B0GUL7 405 aa16.38■□□□□ 0.21
GABRB3-219ENST00000636466 RTN1Q16799 776 aa16.38■□□□□ 0.21
GABRB3-219ENST00000636466 ZMYM4Q5VZL5 1548 aa16.37■□□□□ 0.21
GABRB3-219ENST00000636466 ERICH4A6NGS2 130 aa16.37■□□□□ 0.21
GABRB3-219ENST00000636466 H0YHG0 523 aa16.37■□□□□ 0.21
GABRB3-219ENST00000636466 PICALMQ13492 652 aa16.37■□□□□ 0.21
GABRB3-219ENST00000636466 DNAJC10Q8IXB1 793 aa16.37■□□□□ 0.21
GABRB3-219ENST00000636466 NCOA5Q9HCD5 579 aaKnown RBP16.37■□□□□ 0.21
GABRB3-219ENST00000636466 EIF4A1P60842 406 aaKnown RBP16.37■□□□□ 0.21
GABRB3-219ENST00000636466 IFIT1BQ5T764 474 aaKnown RBP16.37■□□□□ 0.21
GABRB3-219ENST00000636466 DHX37Q8IY37 1157 aaKnown RBP16.37■□□□□ 0.21
GABRB3-219ENST00000636466 USP44Q9H0E7 712 aa16.37■□□□□ 0.21
GABRB3-219ENST00000636466 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.37■□□□□ 0.21
GABRB3-219ENST00000636466 PTPDC1A2A3K4 754 aa16.37■□□□□ 0.21
GABRB3-219ENST00000636466 RNF113AO15541 343 aaKnown RBP16.37■□□□□ 0.21
GABRB3-219ENST00000636466 LDHCP07864 332 aa16.37■□□□□ 0.21
GABRB3-219ENST00000636466 TDRD12Q587J7 1177 aaKnown RBP16.37■□□□□ 0.21
GABRB3-219ENST00000636466 ESR2Q92731 530 aa16.37■□□□□ 0.21
GABRB3-219ENST00000636466 CRNKL1Q9BZJ0 848 aaKnown RBP16.37■□□□□ 0.21
GABRB3-219ENST00000636466 MATR3P43243 847 aaKnown RBP eCLIP16.36■□□□□ 0.21
GABRB3-219ENST00000636466 OTUD7BQ6GQQ9 843 aa16.36■□□□□ 0.21
GABRB3-219ENST00000636466 UTP14AQ9BVJ6 771 aaKnown RBP16.36■□□□□ 0.21
GABRB3-219ENST00000636466 TSPYL1Q9H0U9 437 aa16.36■□□□□ 0.21
GABRB3-219ENST00000636466 TCP11L1Q9NUJ3 509 aa16.36■□□□□ 0.21
GABRB3-219ENST00000636466 KIF5BP33176 963 aa16.36■□□□□ 0.21
GABRB3-219ENST00000636466 MTIF2P46199 727 aaKnown RBP16.36■□□□□ 0.21
GABRB3-219ENST00000636466 TCERG1LQ5VWI1 586 aa16.36■□□□□ 0.21
GABRB3-219ENST00000636466 BLMP54132 1417 aaPredicted RBP16.35■□□□□ 0.21
GABRB3-219ENST00000636466 AOPEPQ8N6M6 819 aa16.35■□□□□ 0.21
GABRB3-219ENST00000636466 SSR1P43307 286 aaKnown RBP16.35■□□□□ 0.21
GABRB3-219ENST00000636466 DHX32Q7L7V1 743 aaKnown RBP16.35■□□□□ 0.21
GABRB3-219ENST00000636466 MRPS27Q92552 414 aaKnown RBP16.35■□□□□ 0.21
GABRB3-219ENST00000636466 LIG1P18858 919 aa16.35■□□□□ 0.21
GABRB3-219ENST00000636466 RUFY3Q7L099 469 aa16.35■□□□□ 0.21
GABRB3-219ENST00000636466 CHAMP1Q96JM3 812 aa16.35■□□□□ 0.21
GABRB3-219ENST00000636466 PLA2R1Q13018 1463 aa16.35■□□□□ 0.21
GABRB3-219ENST00000636466 PLEKHF1Q96S99 279 aa16.35■□□□□ 0.21
GABRB3-219ENST00000636466 FEZ1Q99689 392 aa16.35■□□□□ 0.21
GABRB3-219ENST00000636466 RNF216Q9NWF9 866 aaPredicted RBP16.35■□□□□ 0.21
GABRB3-219ENST00000636466 METTL22Q9BUU2 404 aaPredicted RBP16.34■□□□□ 0.21
GABRB3-219ENST00000636466 PRDM1O75626 825 aa16.34■□□□□ 0.21
GABRB3-219ENST00000636466 TSPY3P0CV98 308 aa16.34■□□□□ 0.21
GABRB3-219ENST00000636466 TSPY8P0CW00 308 aa16.34■□□□□ 0.21
GABRB3-219ENST00000636466 FAM200AQ8TCP9 573 aa16.34■□□□□ 0.21
GABRB3-219ENST00000636466 SLC52A2Q9HAB3 445 aa16.34■□□□□ 0.21
GABRB3-219ENST00000636466 ZSCAN12O43309 604 aa16.34■□□□□ 0.21
GABRB3-219ENST00000636466 TOM1O60784 492 aa16.34■□□□□ 0.21
GABRB3-219ENST00000636466 ERLIN1O75477 346 aa16.34■□□□□ 0.21
GABRB3-219ENST00000636466 SPA17Q15506 151 aa16.34■□□□□ 0.21
GABRB3-219ENST00000636466 FKBP15Q5T1M5 1219 aa16.34■□□□□ 0.21
GABRB3-219ENST00000636466 MCM9Q9NXL9 1143 aa16.34■□□□□ 0.21
GABRB3-219ENST00000636466 N4BP3O15049 544 aa16.33■□□□□ 0.21
GABRB3-219ENST00000636466 TAF5LO75529 589 aa16.33■□□□□ 0.21
GABRB3-219ENST00000636466 TMEM266Q2M3C6 531 aa16.33■□□□□ 0.21
GABRB3-219ENST00000636466 HEATR3Q7Z4Q2 680 aa16.33■□□□□ 0.21
GABRB3-219ENST00000636466 EYA2O00167 538 aa16.33■□□□□ 0.2
GABRB3-219ENST00000636466 TNNI3KQ59H18 835 aa16.33■□□□□ 0.2
GABRB3-219ENST00000636466 FPGT-TNNI3KV9GXZ4 949 aa16.33■□□□□ 0.2
GABRB3-219ENST00000636466 SPTLC2O15270 562 aa16.33■□□□□ 0.2
GABRB3-219ENST00000636466 KIF5CO60282 957 aa16.33■□□□□ 0.2
GABRB3-219ENST00000636466 GSPT1P15170 499 aaKnown RBP16.33■□□□□ 0.2
GABRB3-219ENST00000636466 TAX1BP1Q86VP1 789 aa16.33■□□□□ 0.2
GABRB3-219ENST00000636466 ZNF397Q8NF99 534 aaPredicted RBP16.33■□□□□ 0.2
GABRB3-219ENST00000636466 RAB34Q9BZG1 259 aa16.33■□□□□ 0.2
GABRB3-219ENST00000636466 ERVK-7P63135 1459 aa16.33■□□□□ 0.2
GABRB3-219ENST00000636466 STX17P56962 302 aa16.33■□□□□ 0.2
GABRB3-219ENST00000636466 UBASH3AP57075 661 aa16.33■□□□□ 0.2
GABRB3-219ENST00000636466 TYRO3Q06418 890 aa16.33■□□□□ 0.2
GABRB3-219ENST00000636466 LUZP1Q86V48 1076 aa16.33■□□□□ 0.2
GABRB3-219ENST00000636466 KRT23Q9C075 422 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms