RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-223ENST00000636306 TRIM66O15016 1216 aa12.61□□□□□ -0.39
CHD2-223ENST00000636306 CLCN6P51797 869 aa12.61□□□□□ -0.39
CHD2-223ENST00000636306 GRIPAP1Q4V328 841 aa12.61□□□□□ -0.39
CHD2-223ENST00000636306 CT47A1Q5JQC4 288 aaPredicted RBP12.61□□□□□ -0.39
CHD2-223ENST00000636306 KSR2Q6VAB6 950 aa12.61□□□□□ -0.39
CHD2-223ENST00000636306 CNPY4Q8N129 248 aa12.61□□□□□ -0.39
CHD2-223ENST00000636306 SSH3Q8TE77 659 aa12.61□□□□□ -0.39
CHD2-223ENST00000636306 GTF3C6Q969F1 213 aa12.61□□□□□ -0.39
CHD2-223ENST00000636306 USP44Q9H0E7 712 aa12.61□□□□□ -0.39
CHD2-223ENST00000636306 DDX21Q9NR30 783 aaKnown RBP eCLIP12.61□□□□□ -0.39
CHD2-223ENST00000636306 ADCY9O60503 1353 aa12.6□□□□□ -0.39
CHD2-223ENST00000636306 WDR17Q8IZU2 1322 aa12.6□□□□□ -0.39
CHD2-223ENST00000636306 PCDH11XQ9BZA7 1347 aa12.6□□□□□ -0.39
CHD2-223ENST00000636306 PCDH11YQ9BZA8 1340 aa12.6□□□□□ -0.39
CHD2-223ENST00000636306 MCCP23508 829 aa12.6□□□□□ -0.39
CHD2-223ENST00000636306 NEK4P51957 841 aa12.6□□□□□ -0.39
CHD2-223ENST00000636306 BEND3Q5T5X7 828 aa12.6□□□□□ -0.39
CHD2-223ENST00000636306 TMCO3Q6UWJ1 677 aa12.6□□□□□ -0.39
CHD2-223ENST00000636306 DRC7Q8IY82 874 aa12.6□□□□□ -0.39
CHD2-223ENST00000636306 MED4Q9NPJ6 270 aa12.6□□□□□ -0.39
CHD2-223ENST00000636306 PRDM11Q9NQV5 511 aa12.6□□□□□ -0.39
CHD2-223ENST00000636306 PI4KAP2A4QPH2 592 aa12.59□□□□□ -0.39
CHD2-223ENST00000636306 APBB1O00213 710 aa12.59□□□□□ -0.39
CHD2-223ENST00000636306 RPS6KA5O75582 802 aa12.59□□□□□ -0.39
CHD2-223ENST00000636306 PDE1AP54750 535 aa12.59□□□□□ -0.39
CHD2-223ENST00000636306 ZNF790Q6PG37 636 aa12.59□□□□□ -0.39
CHD2-223ENST00000636306 PI4KAP1Q8N8J0 262 aa12.59□□□□□ -0.39
CHD2-223ENST00000636306 TDRD7Q8NHU6 1098 aaKnown RBP12.59□□□□□ -0.39
CHD2-223ENST00000636306 ZNF592Q92610 1267 aa12.59□□□□□ -0.39
CHD2-223ENST00000636306 CEP89Q96ST8 783 aa12.59□□□□□ -0.39
CHD2-223ENST00000636306 PAPPAQ13219 1627 aa12.59□□□□□ -0.39
CHD2-223ENST00000636306 COL5A2P05997 1499 aaPredicted RBP12.59□□□□□ -0.39
CHD2-223ENST00000636306 KCNQ3O43525 872 aa12.58□□□□□ -0.39
CHD2-223ENST00000636306 CAVIN2O95810 425 aa12.58□□□□□ -0.39
CHD2-223ENST00000636306 CPP00450 1065 aa12.58□□□□□ -0.39
CHD2-223ENST00000636306 NEXNQ0ZGT2 675 aa12.58□□□□□ -0.39
CHD2-223ENST00000636306 LRMPQ12912 555 aa12.58□□□□□ -0.39
CHD2-223ENST00000636306 POLA2Q14181 598 aa12.58□□□□□ -0.39
CHD2-223ENST00000636306 GIMAP6Q6P9H5 292 aa12.58□□□□□ -0.39
CHD2-223ENST00000636306 ILDR2Q71H61 639 aa12.58□□□□□ -0.39
CHD2-223ENST00000636306 ERC1Q8IUD2 1116 aa12.58□□□□□ -0.39
CHD2-223ENST00000636306 PPM1EQ8WY54 764 aa12.58□□□□□ -0.39
CHD2-223ENST00000636306 SMARCE1Q969G3 411 aa12.58□□□□□ -0.39
CHD2-223ENST00000636306 TMX1Q9H3N1 280 aa12.58□□□□□ -0.39
CHD2-223ENST00000636306 SLAIN2Q9P270 581 aa12.58□□□□□ -0.39
CHD2-223ENST00000636306 LCMT1Q9UIC8 334 aa12.58□□□□□ -0.39
CHD2-223ENST00000636306 EXOC6BQ9Y2D4 811 aa12.58□□□□□ -0.39
CHD2-223ENST00000636306 UBR2Q8IWV8 1755 aa12.58□□□□□ -0.4
CHD2-223ENST00000636306 EPB41L2O43491 1005 aaKnown RBP12.58□□□□□ -0.4
CHD2-223ENST00000636306 ZSCAN22P10073 491 aaPredicted RBP12.58□□□□□ -0.4
CHD2-223ENST00000636306 SDSP20132 328 aa12.58□□□□□ -0.4
CHD2-223ENST00000636306 GYS2P54840 703 aa12.58□□□□□ -0.4
CHD2-223ENST00000636306 MTX1Q13505 466 aa12.58□□□□□ -0.4
CHD2-223ENST00000636306 TSGA10IPQ3SY00 556 aa12.58□□□□□ -0.4
CHD2-223ENST00000636306 MCTP2Q6DN12 878 aa12.58□□□□□ -0.4
CHD2-223ENST00000636306 LINS1Q8NG48 757 aa12.58□□□□□ -0.4
CHD2-223ENST00000636306 CACTINQ8WUQ7 758 aaKnown RBP12.58□□□□□ -0.4
CHD2-223ENST00000636306 DDX17Q92841 729 aaKnown RBP12.58□□□□□ -0.4
CHD2-223ENST00000636306 FMNL2Q96PY5 1086 aa12.58□□□□□ -0.4
CHD2-223ENST00000636306 CXorf56Q9H5V9 222 aa12.58□□□□□ -0.4
CHD2-223ENST00000636306 GDPD2Q9HCC8 539 aa12.58□□□□□ -0.4
CHD2-223ENST00000636306 C9orf78Q9NZ63 289 aaPredicted RBP12.58□□□□□ -0.4
CHD2-223ENST00000636306 STAP2Q9UGK3 403 aa12.58□□□□□ -0.4
CHD2-223ENST00000636306 PNMA6EA0A0J9YXQ4 647 aa12.57□□□□□ -0.4
CHD2-223ENST00000636306 ACTN2P35609 894 aa12.57□□□□□ -0.4
CHD2-223ENST00000636306 NBPF20Q3BBV1 942 aa12.57□□□□□ -0.4
CHD2-223ENST00000636306 HSP90AB3PQ58FF7 597 aa12.57□□□□□ -0.4
CHD2-223ENST00000636306 LARP1Q6PKG0 1096 aaKnown RBP12.57□□□□□ -0.4
CHD2-223ENST00000636306 CNPY2Q9Y2B0 182 aa12.57□□□□□ -0.4
CHD2-223ENST00000636306 MAP3K2Q9Y2U5 619 aa12.57□□□□□ -0.4
CHD2-223ENST00000636306 SALL3Q9BXA9 1300 aa12.57□□□□□ -0.4
CHD2-223ENST00000636306 AFDNP55196 1824 aaKnown RBP12.57□□□□□ -0.4
CHD2-223ENST00000636306 CCDC196A0A1B0GTZ2 297 aa12.56□□□□□ -0.4
CHD2-223ENST00000636306 SNRPA1P09661 255 aaKnown RBP12.56□□□□□ -0.4
CHD2-223ENST00000636306 PRR29P0C7W0 189 aa12.56□□□□□ -0.4
CHD2-223ENST00000636306 CHRNA2Q15822 529 aa12.56□□□□□ -0.4
CHD2-223ENST00000636306 CCDC93Q567U6 631 aa12.56□□□□□ -0.4
CHD2-223ENST00000636306 CABLES1Q8TDN4 633 aa12.56□□□□□ -0.4
CHD2-223ENST00000636306 CNKSR2Q8WXI2 1034 aa12.56□□□□□ -0.4
CHD2-223ENST00000636306 GPATCH3Q96I76 525 aa12.56□□□□□ -0.4
CHD2-223ENST00000636306 DRC1Q96MC2 740 aa12.56□□□□□ -0.4
CHD2-223ENST00000636306 ARFGEF2Q9Y6D5 1785 aa12.56□□□□□ -0.4
CHD2-223ENST00000636306 SRGAP3O43295 1099 aa12.56□□□□□ -0.4
CHD2-223ENST00000636306 CABP4P57796 275 aa12.56□□□□□ -0.4
CHD2-223ENST00000636306 TRDNQ13061 729 aa12.56□□□□□ -0.4
CHD2-223ENST00000636306 DHX8Q14562 1220 aaKnown RBP12.56□□□□□ -0.4
CHD2-223ENST00000636306 MAP3K11Q16584 847 aa12.56□□□□□ -0.4
CHD2-223ENST00000636306 SARM1Q6SZW1 724 aa12.56□□□□□ -0.4
CHD2-223ENST00000636306 PPP1R42Q7Z4L9 355 aa12.56□□□□□ -0.4
CHD2-223ENST00000636306 LRRC8AQ8IWT6 810 aa12.56□□□□□ -0.4
CHD2-223ENST00000636306 C16orf71Q8IYS4 520 aaPredicted RBP12.56□□□□□ -0.4
CHD2-223ENST00000636306 SRRTQ9BXP5 876 aaKnown RBP12.56□□□□□ -0.4
CHD2-223ENST00000636306 TRIM5Q9C035 493 aa12.56□□□□□ -0.4
CHD2-223ENST00000636306 MRVI1Q9Y6F6 885 aa12.56□□□□□ -0.4
CHD2-223ENST00000636306 COL14A1Q05707 1796 aaKnown RBP12.55□□□□□ -0.4
CHD2-223ENST00000636306 ZNF335Q9H4Z2 1342 aaPredicted RBP12.55□□□□□ -0.4
CHD2-223ENST00000636306 POLR3GO15318 223 aaPredicted RBP12.55□□□□□ -0.4
CHD2-223ENST00000636306 SURF6O75683 361 aaKnown RBP12.55□□□□□ -0.4
CHD2-223ENST00000636306 TYRO3Q06418 890 aa12.55□□□□□ -0.4
CHD2-223ENST00000636306 MMS22LQ6ZRQ5 1243 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms