RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 G2E3Q7L622 706 aa22.89■■□□□ 1.25
PNKP-225ENST00000636214 YDJCA8MPS7 323 aa22.88■■□□□ 1.25
PNKP-225ENST00000636214 EXOSC9Q06265 439 aaKnown RBP22.88■■□□□ 1.25
PNKP-225ENST00000636214 PODXL2Q9NZ53 605 aa22.88■■□□□ 1.25
PNKP-225ENST00000636214 UBE3BQ7Z3V4 1068 aa22.87■■□□□ 1.25
PNKP-225ENST00000636214 DNAAF4Q8WXU2 420 aa22.87■■□□□ 1.25
PNKP-225ENST00000636214 CNOT7Q9UIV1 285 aaKnown RBP22.87■■□□□ 1.25
PNKP-225ENST00000636214 XDHP47989 1333 aa22.86■■□□□ 1.25
PNKP-225ENST00000636214 PSMD14O00487 310 aa22.86■■□□□ 1.25
PNKP-225ENST00000636214 DOK7Q18PE1 504 aa22.86■■□□□ 1.25
PNKP-225ENST00000636214 DEFB115Q30KQ5 88 aa22.86■■□□□ 1.25
PNKP-225ENST00000636214 COL4A1P02462 1669 aa22.86■■□□□ 1.25
PNKP-225ENST00000636214 VAMP4O75379 141 aa22.85■■□□□ 1.25
PNKP-225ENST00000636214 PAXIP1Q6ZW49 1069 aaPredicted RBP22.85■■□□□ 1.25
PNKP-225ENST00000636214 MICALL2Q8IY33 904 aa22.85■■□□□ 1.25
PNKP-225ENST00000636214 GPR101Q96P66 508 aaPredicted RBP22.85■■□□□ 1.25
PNKP-225ENST00000636214 TRPM7Q96QT4 1865 aa22.85■■□□□ 1.25
PNKP-225ENST00000636214 RPS12P25398 132 aaKnown RBP22.84■■□□□ 1.25
PNKP-225ENST00000636214 TTLL11Q8NHH1 800 aa22.84■■□□□ 1.25
PNKP-225ENST00000636214 ZC3H15Q8WU90 426 aaKnown RBP22.84■■□□□ 1.25
PNKP-225ENST00000636214 DPF2Q92785 391 aa22.84■■□□□ 1.25
PNKP-225ENST00000636214 AIDAQ96BJ3 306 aa22.84■■□□□ 1.25
PNKP-225ENST00000636214 ATP2B4P23634 1241 aa22.83■■□□□ 1.25
PNKP-225ENST00000636214 IGHMBP2P38935 993 aaKnown RBP22.83■■□□□ 1.25
PNKP-225ENST00000636214 VEGFBP49765 207 aa22.83■■□□□ 1.25
PNKP-225ENST00000636214 GCKRQ14397 625 aa22.83■■□□□ 1.25
PNKP-225ENST00000636214 LINS1Q8NG48 757 aa22.83■■□□□ 1.25
PNKP-225ENST00000636214 ZBTB12Q9Y330 459 aaPredicted RBP22.83■■□□□ 1.25
PNKP-225ENST00000636214 RASSF10A6NK89 507 aa22.82■■□□□ 1.24
PNKP-225ENST00000636214 H7C1W4 665 aa22.82■■□□□ 1.24
PNKP-225ENST00000636214 GREM2Q9H772 168 aa22.82■■□□□ 1.24
PNKP-225ENST00000636214 TRAF5O00463 557 aa22.81■■□□□ 1.24
PNKP-225ENST00000636214 TRPM4Q8TD43 1214 aa22.81■■□□□ 1.24
PNKP-225ENST00000636214 BSDC1Q9NW68 430 aaPredicted RBP22.81■■□□□ 1.24
PNKP-225ENST00000636214 SPEF2Q9C093 1822 aa22.8■■□□□ 1.24
PNKP-225ENST00000636214 RTL9Q8NET4 1388 aa22.8■■□□□ 1.24
PNKP-225ENST00000636214 CELF2O95319 508 aaKnown RBP22.79■■□□□ 1.24
PNKP-225ENST00000636214 ECE1P42892 770 aa22.79■■□□□ 1.24
PNKP-225ENST00000636214 CDC37L1Q7L3B6 337 aa22.79■■□□□ 1.24
PNKP-225ENST00000636214 MPHOSPH8Q99549 860 aa22.79■■□□□ 1.24
PNKP-225ENST00000636214 PLA2G12BQ9BX93 195 aa22.79■■□□□ 1.24
PNKP-225ENST00000636214 GLIS2Q9BZE0 524 aaPredicted RBP22.79■■□□□ 1.24
PNKP-225ENST00000636214 SHTN1A0MZ66 631 aa22.78■■□□□ 1.24
PNKP-225ENST00000636214 FMR1Q06787 632 aaKnown RBP eCLIP22.78■■□□□ 1.24
PNKP-225ENST00000636214 COL13A1Q5TAT6 717 aaPredicted RBP22.78■■□□□ 1.24
PNKP-225ENST00000636214 ZNF408Q9H9D4 720 aa22.78■■□□□ 1.24
PNKP-225ENST00000636214 SPINK5Q9NQ38 1064 aaPredicted RBP22.78■■□□□ 1.24
PNKP-225ENST00000636214 ITGA6P23229 1130 aa22.77■■□□□ 1.24
PNKP-225ENST00000636214 HIRAP54198 1017 aaPredicted RBP22.77■■□□□ 1.24
PNKP-225ENST00000636214 GRM1Q13255 1194 aa22.77■■□□□ 1.24
PNKP-225ENST00000636214 TBC1D10BQ4KMP7 808 aaPredicted RBP22.77■■□□□ 1.24
PNKP-225ENST00000636214 RBM26Q5T8P6 1007 aaKnown RBP22.77■■□□□ 1.24
PNKP-225ENST00000636214 SAMD7Q7Z3H4 446 aa22.77■■□□□ 1.24
PNKP-225ENST00000636214 TNS4Q8IZW8 715 aa22.77■■□□□ 1.24
PNKP-225ENST00000636214 KCNQ5Q9NR82 932 aa22.77■■□□□ 1.24
PNKP-225ENST00000636214 PGAP2Q9UHJ9 254 aa22.77■■□□□ 1.24
PNKP-225ENST00000636214 MINPP1Q9UNW1 487 aa22.77■■□□□ 1.24
PNKP-225ENST00000636214 WDR33Q9C0J8 1336 aaKnown RBP22.77■■□□□ 1.24
PNKP-225ENST00000636214 SCN9AQ15858 1988 aa22.76■■□□□ 1.23
PNKP-225ENST00000636214 VIL1P09327 827 aaKnown RBP22.76■■□□□ 1.23
PNKP-225ENST00000636214 FAM161AQ3B820 660 aa22.76■■□□□ 1.23
PNKP-225ENST00000636214 CHMP3Q9Y3E7 222 aa22.76■■□□□ 1.23
PNKP-225ENST00000636214 F6X3S4 739 aa22.75■■□□□ 1.23
PNKP-225ENST00000636214 KCNJ4P48050 445 aa22.75■■□□□ 1.23
PNKP-225ENST00000636214 CCT4P50991 539 aaKnown RBP22.75■■□□□ 1.23
PNKP-225ENST00000636214 KIF4BQ2VIQ3 1234 aa22.75■■□□□ 1.23
PNKP-225ENST00000636214 PODNQ7Z5L7 613 aa22.75■■□□□ 1.23
PNKP-225ENST00000636214 DCPSQ96C86 337 aaKnown RBP22.75■■□□□ 1.23
PNKP-225ENST00000636214 ANKRD2Q9GZV1 360 aa22.75■■□□□ 1.23
PNKP-225ENST00000636214 TLL2Q9Y6L7 1015 aa22.75■■□□□ 1.23
PNKP-225ENST00000636214 MED23Q9ULK4 1368 aa22.75■■□□□ 1.23
PNKP-225ENST00000636214 ANKRD18BA2A2Z9 1011 aa22.74■■□□□ 1.23
PNKP-225ENST00000636214 MAP2K1Q02750 393 aaPredicted RBP22.74■■□□□ 1.23
PNKP-225ENST00000636214 CST9Q5W186 159 aa22.74■■□□□ 1.23
PNKP-225ENST00000636214 RSBN1LQ6PCB5 846 aaPredicted RBP22.74■■□□□ 1.23
PNKP-225ENST00000636214 AGBL3Q8NEM8 1001 aa22.74■■□□□ 1.23
PNKP-225ENST00000636214 CAPNS2Q96L46 248 aa22.74■■□□□ 1.23
PNKP-225ENST00000636214 USP17L3A6NCW0 530 aa22.73■■□□□ 1.23
PNKP-225ENST00000636214 USP17L4A6NCW7 530 aa22.73■■□□□ 1.23
PNKP-225ENST00000636214 CASP7P55210 303 aa22.73■■□□□ 1.23
PNKP-225ENST00000636214 BEND3Q5T5X7 828 aa22.73■■□□□ 1.23
PNKP-225ENST00000636214 USP17L1Q7RTZ2 530 aa22.73■■□□□ 1.23
PNKP-225ENST00000636214 KRT26Q7Z3Y9 468 aa22.73■■□□□ 1.23
PNKP-225ENST00000636214 FBXW7Q969H0 707 aa22.73■■□□□ 1.23
PNKP-225ENST00000636214 BEGAINQ9BUH8 593 aa22.73■■□□□ 1.23
PNKP-225ENST00000636214 C9orf78Q9NZ63 289 aaPredicted RBP22.73■■□□□ 1.23
PNKP-225ENST00000636214 LEMD3Q9Y2U8 911 aa22.73■■□□□ 1.23
PNKP-225ENST00000636214 CTCFP49711 727 aaPredicted RBP22.72■■□□□ 1.23
PNKP-225ENST00000636214 IFIT5Q13325 482 aaKnown RBP22.72■■□□□ 1.23
PNKP-225ENST00000636214 SLC4A10Q6U841 1118 aa22.72■■□□□ 1.23
PNKP-225ENST00000636214 USP48Q86UV5 1035 aa22.72■■□□□ 1.23
PNKP-225ENST00000636214 PSME4Q14997 1843 aa22.71■■□□□ 1.23
PNKP-225ENST00000636214 FOXN1O15353 648 aa22.71■■□□□ 1.23
PNKP-225ENST00000636214 CSF1RP07333 972 aa22.71■■□□□ 1.23
PNKP-225ENST00000636214 TAF7LQ5H9L4 462 aa22.71■■□□□ 1.23
PNKP-225ENST00000636214 CYP4F22Q6NT55 531 aa22.71■■□□□ 1.23
PNKP-225ENST00000636214 POLR2AP24928 1970 aaKnown RBP22.7■■□□□ 1.23
PNKP-225ENST00000636214 E9PSI1 815 aa22.7■■□□□ 1.22
PNKP-225ENST00000636214 ALDH1L1O75891 902 aa22.7■■□□□ 1.22
PNKP-225ENST00000636214 SULF1Q8IWU6 871 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms