RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 ARMC9Q7Z3E5 817 aa6.78□□□□□ -1.32
SCN1A-212ENST00000636194 CTAGE4Q8IX94 777 aa6.78□□□□□ -1.32
SCN1A-212ENST00000636194 TOM1L2Q6ZVM7 507 aa6.78□□□□□ -1.32
SCN1A-212ENST00000636194 CDAN1Q8IWY9 1227 aa6.78□□□□□ -1.32
SCN1A-212ENST00000636194 HACE1Q8IYU2 909 aa6.78□□□□□ -1.32
SCN1A-212ENST00000636194 NOD1Q9Y239 953 aa6.78□□□□□ -1.32
SCN1A-212ENST00000636194 HMOX1P09601 288 aa6.78□□□□□ -1.32
SCN1A-212ENST00000636194 EEF2P13639 858 aaKnown RBP6.78□□□□□ -1.32
SCN1A-212ENST00000636194 TSNAXIP1Q2TAA8 658 aa6.78□□□□□ -1.32
SCN1A-212ENST00000636194 OGFOD1Q8N543 542 aa6.78□□□□□ -1.32
SCN1A-212ENST00000636194 KIFAP3Q92845 792 aa6.78□□□□□ -1.32
SCN1A-212ENST00000636194 CIZ1Q9ULV3 898 aaPredicted RBP6.78□□□□□ -1.32
SCN1A-212ENST00000636194 CALML3P27482 149 aa6.78□□□□□ -1.32
SCN1A-212ENST00000636194 CCDC38Q502W7 563 aa6.78□□□□□ -1.32
SCN1A-212ENST00000636194 SUFUQ9UMX1 484 aa6.78□□□□□ -1.32
SCN1A-212ENST00000636194 SLC12A7Q9Y666 1083 aa6.78□□□□□ -1.32
SCN1A-212ENST00000636194 RPGRIP1LQ68CZ1 1315 aa6.78□□□□□ -1.32
SCN1A-212ENST00000636194 GSTO1P78417 241 aa6.78□□□□□ -1.32
SCN1A-212ENST00000636194 TTF1Q15361 905 aaPredicted RBP6.78□□□□□ -1.32
SCN1A-212ENST00000636194 GCC1Q96CN9 775 aa6.78□□□□□ -1.32
SCN1A-212ENST00000636194 PAWRQ96IZ0 340 aaKnown RBP6.78□□□□□ -1.32
SCN1A-212ENST00000636194 SCAND2PQ9GZW5 306 aaPredicted RBP6.78□□□□□ -1.32
SCN1A-212ENST00000636194 ZNF277Q9NRM2 450 aaPredicted RBP6.78□□□□□ -1.32
SCN1A-212ENST00000636194 ABCF2Q9UG63 623 aa6.78□□□□□ -1.32
SCN1A-212ENST00000636194 CD2APQ9Y5K6 639 aa6.78□□□□□ -1.32
SCN1A-212ENST00000636194 GOLGA8QA0A0J9YX86 632 aa6.78□□□□□ -1.32
SCN1A-212ENST00000636194 GOLGA8OA6NCC3 632 aa6.78□□□□□ -1.32
SCN1A-212ENST00000636194 GOLGA8NF8WBI6 632 aa6.78□□□□□ -1.32
SCN1A-212ENST00000636194 IFIT1P09914 478 aaKnown RBP6.78□□□□□ -1.32
SCN1A-212ENST00000636194 PLCB3Q01970 1234 aa6.78□□□□□ -1.32
SCN1A-212ENST00000636194 LMNB2Q03252 620 aa6.78□□□□□ -1.32
SCN1A-212ENST00000636194 LNPKQ9C0E8 428 aa6.78□□□□□ -1.32
SCN1A-212ENST00000636194 ZKSCAN5Q9Y2L8 839 aa6.78□□□□□ -1.32
SCN1A-212ENST00000636194 RASA3Q14644 834 aa6.77□□□□□ -1.33
SCN1A-212ENST00000636194 DBN1Q16643 649 aa6.77□□□□□ -1.33
SCN1A-212ENST00000636194 LMNTD2Q8IXW0 634 aa6.77□□□□□ -1.33
SCN1A-212ENST00000636194 CCDC68Q9H2F9 335 aa6.77□□□□□ -1.33
SCN1A-212ENST00000636194 I3L4J1 428 aa6.77□□□□□ -1.33
SCN1A-212ENST00000636194 HSP90AA5PQ58FG0 334 aa6.77□□□□□ -1.33
SCN1A-212ENST00000636194 EP400NLQ6ZTU2 488 aa6.77□□□□□ -1.33
SCN1A-212ENST00000636194 CCDC65Q8IXS2 484 aa6.77□□□□□ -1.33
SCN1A-212ENST00000636194 ZGPATQ8N5A5 531 aaKnown RBP6.77□□□□□ -1.33
SCN1A-212ENST00000636194 TSGA10Q9BZW7 698 aa6.77□□□□□ -1.33
SCN1A-212ENST00000636194 ATP6V0A2Q9Y487 856 aa6.77□□□□□ -1.33
SCN1A-212ENST00000636194 ICE1Q9Y2F5 2266 aa6.77□□□□□ -1.33
SCN1A-212ENST00000636194 HSPA8P11142 646 aaKnown RBP6.77□□□□□ -1.33
SCN1A-212ENST00000636194 RTEL1Q9NZ71 1219 aa6.77□□□□□ -1.33
SCN1A-212ENST00000636194 ZBED9Q6R2W3 1325 aa6.77□□□□□ -1.33
SCN1A-212ENST00000636194 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.77□□□□□ -1.33
SCN1A-212ENST00000636194 CEP85LQ5SZL2 805 aa6.77□□□□□ -1.33
SCN1A-212ENST00000636194 RBM26Q5T8P6 1007 aaKnown RBP6.77□□□□□ -1.33
SCN1A-212ENST00000636194 PPANQ9NQ55 473 aaKnown RBP6.77□□□□□ -1.33
SCN1A-212ENST00000636194 BMP15O95972 392 aa6.77□□□□□ -1.33
SCN1A-212ENST00000636194 OCM2P0CE71 109 aa6.77□□□□□ -1.33
SCN1A-212ENST00000636194 OCMP0CE72 109 aaPredicted RBP6.77□□□□□ -1.33
SCN1A-212ENST00000636194 FBXW4P57775 412 aa6.77□□□□□ -1.33
SCN1A-212ENST00000636194 ZC3H15Q8WU90 426 aaKnown RBP6.77□□□□□ -1.33
SCN1A-212ENST00000636194 CCDC138Q96M89 665 aa6.77□□□□□ -1.33
SCN1A-212ENST00000636194 AGTPBP1Q9UPW5 1226 aa6.77□□□□□ -1.33
SCN1A-212ENST00000636194 ANGPTL3Q9Y5C1 460 aa6.77□□□□□ -1.33
SCN1A-212ENST00000636194 A6NNZ2 444 aa6.77□□□□□ -1.33
SCN1A-212ENST00000636194 PIP4K2BP78356 416 aa6.77□□□□□ -1.33
SCN1A-212ENST00000636194 RBM10P98175 930 aaKnown RBP6.77□□□□□ -1.33
SCN1A-212ENST00000636194 SSRP1Q08945 709 aaKnown RBP6.77□□□□□ -1.33
SCN1A-212ENST00000636194 TUBB8Q3ZCM7 444 aa6.77□□□□□ -1.33
SCN1A-212ENST00000636194 INTS8Q75QN2 995 aaKnown RBP6.77□□□□□ -1.33
SCN1A-212ENST00000636194 C6orf50Q9HD87 102 aa6.77□□□□□ -1.33
SCN1A-212ENST00000636194 NKIRAS1Q9NYS0 192 aa6.77□□□□□ -1.33
SCN1A-212ENST00000636194 STX10O60499 249 aa6.76□□□□□ -1.33
SCN1A-212ENST00000636194 STK3Q13188 491 aa6.76□□□□□ -1.33
SCN1A-212ENST00000636194 PPP2R5DQ14738 602 aa6.76□□□□□ -1.33
SCN1A-212ENST00000636194 PSMD6Q15008 389 aa6.76□□□□□ -1.33
SCN1A-212ENST00000636194 A0A1B0GUA9 196 aa6.76□□□□□ -1.33
SCN1A-212ENST00000636194 CTAGE15A4D2H0 777 aa6.76□□□□□ -1.33
SCN1A-212ENST00000636194 NAP1L4Q99733 375 aaKnown RBP6.76□□□□□ -1.33
SCN1A-212ENST00000636194 CCDC171Q6TFL3 1326 aa6.76□□□□□ -1.33
SCN1A-212ENST00000636194 MINK1Q8N4C8 1332 aaPredicted RBP6.76□□□□□ -1.33
SCN1A-212ENST00000636194 F8W8V4 182 aa6.76□□□□□ -1.33
SCN1A-212ENST00000636194 IDH1O75874 414 aaKnown RBP6.76□□□□□ -1.33
SCN1A-212ENST00000636194 UBA7P41226 1012 aa6.76□□□□□ -1.33
SCN1A-212ENST00000636194 RPS6KA2Q15349 733 aa6.76□□□□□ -1.33
SCN1A-212ENST00000636194 RNF34Q969K3 372 aa6.76□□□□□ -1.33
SCN1A-212ENST00000636194 TPCN1Q9ULQ1 816 aa6.76□□□□□ -1.33
SCN1A-212ENST00000636194 PPFIA3O75145 1194 aa6.76□□□□□ -1.33
SCN1A-212ENST00000636194 SLC5A1P13866 664 aa6.76□□□□□ -1.33
SCN1A-212ENST00000636194 CYLC1P35663 651 aaPredicted RBP6.76□□□□□ -1.33
SCN1A-212ENST00000636194 LGSNQ5TDP6 509 aa6.76□□□□□ -1.33
SCN1A-212ENST00000636194 CNNM3Q8NE01 707 aa6.76□□□□□ -1.33
SCN1A-212ENST00000636194 SIN3AQ96ST3 1273 aa6.76□□□□□ -1.33
SCN1A-212ENST00000636194 NR1I2O75469 434 aa6.76□□□□□ -1.33
SCN1A-212ENST00000636194 LMOD1P29536 600 aaPredicted RBP6.76□□□□□ -1.33
SCN1A-212ENST00000636194 TERF1P54274 439 aa6.76□□□□□ -1.33
SCN1A-212ENST00000636194 PPP1R7Q15435 360 aa6.76□□□□□ -1.33
SCN1A-212ENST00000636194 MORC4Q8TE76 937 aa6.76□□□□□ -1.33
SCN1A-212ENST00000636194 C8orf76Q96K31 380 aa6.76□□□□□ -1.33
SCN1A-212ENST00000636194 Q9H521 79 aa6.76□□□□□ -1.33
SCN1A-212ENST00000636194 SATB2Q9UPW6 733 aa6.76□□□□□ -1.33
SCN1A-212ENST00000636194 ST20-MTHFSA0A0A6YYL1 179 aa6.76□□□□□ -1.33
SCN1A-212ENST00000636194 MTHFSP49914 203 aa6.76□□□□□ -1.33
SCN1A-212ENST00000636194 RASSF2P50749 326 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms