RNA–Protein interactions for RNA: ENST00000636116.1

SYNGAP1-211, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 161 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-211ENST00000636116 CCDC102AQ96A19 550 aa9.73□□□□□ -0.85
SYNGAP1-211ENST00000636116 SEC31BQ9NQW1 1179 aa9.73□□□□□ -0.85
SYNGAP1-211ENST00000636116 RNF186Q9NXI6 227 aa9.73□□□□□ -0.85
SYNGAP1-211ENST00000636116 IRS4O14654 1257 aaPredicted RBP9.72□□□□□ -0.85
SYNGAP1-211ENST00000636116 RPS12P25398 132 aaKnown RBP9.72□□□□□ -0.85
SYNGAP1-211ENST00000636116 SOX10P56693 466 aa9.72□□□□□ -0.85
SYNGAP1-211ENST00000636116 LMOD3Q0VAK6 560 aa9.72□□□□□ -0.85
SYNGAP1-211ENST00000636116 HDGFL1Q5TGJ6 251 aa9.72□□□□□ -0.85
SYNGAP1-211ENST00000636116 JARID2Q92833 1246 aaPredicted RBP9.72□□□□□ -0.85
SYNGAP1-211ENST00000636116 CSRNP1Q96S65 589 aa9.72□□□□□ -0.85
SYNGAP1-211ENST00000636116 EYA3Q99504 573 aa9.72□□□□□ -0.85
SYNGAP1-211ENST00000636116 ZC3H12CQ9C0D7 883 aaKnown RBP9.72□□□□□ -0.85
SYNGAP1-211ENST00000636116 GGA3Q9NZ52 723 aa9.72□□□□□ -0.85
SYNGAP1-211ENST00000636116 TRIM35Q9UPQ4 493 aa9.72□□□□□ -0.85
SYNGAP1-211ENST00000636116 G3V3G9 751 aa9.71□□□□□ -0.86
SYNGAP1-211ENST00000636116 VIL1P09327 827 aaKnown RBP9.71□□□□□ -0.86
SYNGAP1-211ENST00000636116 KIF4BQ2VIQ3 1234 aa9.71□□□□□ -0.86
SYNGAP1-211ENST00000636116 DCAF8Q5TAQ9 597 aa9.71□□□□□ -0.86
SYNGAP1-211ENST00000636116 SULF1Q8IWU6 871 aa9.71□□□□□ -0.86
SYNGAP1-211ENST00000636116 CDCA5Q96FF9 252 aa9.71□□□□□ -0.86
SYNGAP1-211ENST00000636116 SCAF8Q9UPN6 1271 aaKnown RBP9.71□□□□□ -0.86
SYNGAP1-211ENST00000636116 TNRC18O15417 2968 aaPredicted RBP9.71□□□□□ -0.86
SYNGAP1-211ENST00000636116 DDX60Q8IY21 1712 aaKnown RBP9.7□□□□□ -0.86
SYNGAP1-211ENST00000636116 WTIPA6NIX2 430 aaPredicted RBP9.7□□□□□ -0.86
SYNGAP1-211ENST00000636116 UFL1O94874 794 aa9.7□□□□□ -0.86
SYNGAP1-211ENST00000636116 TRIM28Q13263 835 aaKnown RBP9.7□□□□□ -0.86
SYNGAP1-211ENST00000636116 SCARF1Q14162 830 aa9.7□□□□□ -0.86
SYNGAP1-211ENST00000636116 ANGEL2Q5VTE6 544 aaKnown RBP9.7□□□□□ -0.86
SYNGAP1-211ENST00000636116 DUSP27Q5VZP5 1158 aa9.7□□□□□ -0.86
SYNGAP1-211ENST00000636116 MOB2Q70IA6 237 aa9.7□□□□□ -0.86
SYNGAP1-211ENST00000636116 CCDC85AQ96PX6 553 aaPredicted RBP9.7□□□□□ -0.86
SYNGAP1-211ENST00000636116 PHAXQ9H814 394 aaKnown RBP9.7□□□□□ -0.86
SYNGAP1-211ENST00000636116 HYPKQ9NX55 129 aa9.7□□□□□ -0.86
SYNGAP1-211ENST00000636116 SAGE1Q9NXZ1 904 aa9.7□□□□□ -0.86
SYNGAP1-211ENST00000636116 ANKIB1Q9P2G1 1089 aa9.7□□□□□ -0.86
SYNGAP1-211ENST00000636116 DBF4Q9UBU7 674 aaPredicted RBP9.7□□□□□ -0.86
SYNGAP1-211ENST00000636116 LRRC37AA6NMS7 1700 aa9.7□□□□□ -0.86
SYNGAP1-211ENST00000636116 SLC10A3P09131 477 aa9.69□□□□□ -0.86
SYNGAP1-211ENST00000636116 SCN9AQ15858 1988 aa9.69□□□□□ -0.86
SYNGAP1-211ENST00000636116 PRAMEF18Q5VWM3 479 aa9.69□□□□□ -0.86
SYNGAP1-211ENST00000636116 RIC3Q7Z5B4 369 aa9.69□□□□□ -0.86
SYNGAP1-211ENST00000636116 UBE2Q2LH0YL09 131 aa9.68□□□□□ -0.86
SYNGAP1-211ENST00000636116 ELL2O00472 640 aaPredicted RBP9.68□□□□□ -0.86
SYNGAP1-211ENST00000636116 ZNF280AP59817 542 aaPredicted RBP9.68□□□□□ -0.86
SYNGAP1-211ENST00000636116 RALBP1Q15311 655 aa9.68□□□□□ -0.86
SYNGAP1-211ENST00000636116 RSBN1LQ6PCB5 846 aaPredicted RBP9.68□□□□□ -0.86
SYNGAP1-211ENST00000636116 CTU1Q7Z7A3 348 aaKnown RBP9.68□□□□□ -0.86
SYNGAP1-211ENST00000636116 RASAL3Q86YV0 1011 aa9.68□□□□□ -0.86
SYNGAP1-211ENST00000636116 ZBTB38Q8NAP3 1195 aaPredicted RBP9.68□□□□□ -0.86
SYNGAP1-211ENST00000636116 RUNDC1Q96C34 613 aa9.68□□□□□ -0.86
SYNGAP1-211ENST00000636116 MYD88Q99836 296 aa9.68□□□□□ -0.86
SYNGAP1-211ENST00000636116 PODXL2Q9NZ53 605 aa9.68□□□□□ -0.86
SYNGAP1-211ENST00000636116 GGA1Q9UJY5 639 aa9.68□□□□□ -0.86
SYNGAP1-211ENST00000636116 TBC1D8O95759 1140 aa9.67□□□□□ -0.86
SYNGAP1-211ENST00000636116 HOXB7P09629 217 aa9.67□□□□□ -0.86
SYNGAP1-211ENST00000636116 USP17L8P0C7I0 530 aa9.67□□□□□ -0.86
SYNGAP1-211ENST00000636116 AGBL3Q8NEM8 1001 aa9.67□□□□□ -0.86
SYNGAP1-211ENST00000636116 GMLQ99445 158 aa9.67□□□□□ -0.86
SYNGAP1-211ENST00000636116 MXD3Q9BW11 206 aa9.67□□□□□ -0.86
SYNGAP1-211ENST00000636116 MBIPQ9NS73 344 aa9.67□□□□□ -0.86
SYNGAP1-211ENST00000636116 ADAMTS8Q9UP79 889 aa9.67□□□□□ -0.86
SYNGAP1-211ENST00000636116 PCCAP05165 728 aaPredicted RBP9.66□□□□□ -0.86
SYNGAP1-211ENST00000636116 GOLGA2Q08379 1002 aa9.66□□□□□ -0.86
SYNGAP1-211ENST00000636116 NBPF9Q3BBW0 867 aa9.66□□□□□ -0.86
SYNGAP1-211ENST00000636116 CCDC152Q4G0S7 254 aa9.66□□□□□ -0.86
SYNGAP1-211ENST00000636116 MYOZ2Q9NPC6 264 aa9.66□□□□□ -0.86
SYNGAP1-211ENST00000636116 AKAP11Q9UKA4 1901 aa9.66□□□□□ -0.86
SYNGAP1-211ENST00000636116 USP17L3A6NCW0 530 aa9.65□□□□□ -0.86
SYNGAP1-211ENST00000636116 USP17L4A6NCW7 530 aa9.65□□□□□ -0.86
SYNGAP1-211ENST00000636116 PDE8AO60658 829 aa9.65□□□□□ -0.86
SYNGAP1-211ENST00000636116 MKRN3Q13064 507 aaKnown RBP9.65□□□□□ -0.86
SYNGAP1-211ENST00000636116 DDX10Q13206 875 aaKnown RBP9.65□□□□□ -0.86
SYNGAP1-211ENST00000636116 WDR43Q15061 677 aaKnown RBP eCLIP9.65□□□□□ -0.86
SYNGAP1-211ENST00000636116 USP17L1Q7RTZ2 530 aa9.65□□□□□ -0.86
SYNGAP1-211ENST00000636116 ANKRD18AQ8IVF6 992 aa9.65□□□□□ -0.86
SYNGAP1-211ENST00000636116 HPS5Q9UPZ3 1129 aa9.65□□□□□ -0.86
SYNGAP1-211ENST00000636116 XDHP47989 1333 aa9.64□□□□□ -0.87
SYNGAP1-211ENST00000636116 ZNF853P0CG23 659 aa9.64□□□□□ -0.87
SYNGAP1-211ENST00000636116 FKBP1BP68106 108 aa9.64□□□□□ -0.87
SYNGAP1-211ENST00000636116 PRKG1Q13976 671 aa9.64□□□□□ -0.87
SYNGAP1-211ENST00000636116 TTLL12Q14166 644 aaPredicted RBP9.64□□□□□ -0.87
SYNGAP1-211ENST00000636116 C8orf58Q8NAV2 365 aa9.64□□□□□ -0.87
SYNGAP1-211ENST00000636116 CCDC191Q8NCU4 936 aa9.64□□□□□ -0.87
SYNGAP1-211ENST00000636116 ZNF296Q8WUU4 475 aaPredicted RBP9.64□□□□□ -0.87
SYNGAP1-211ENST00000636116 FBXW7Q969H0 707 aa9.64□□□□□ -0.87
SYNGAP1-211ENST00000636116 R3HDMLQ9H3Y0 253 aa9.64□□□□□ -0.87
SYNGAP1-211ENST00000636116 CWC25Q9NXE8 425 aaPredicted RBP9.64□□□□□ -0.87
SYNGAP1-211ENST00000636116 PCDH10Q9P2E7 1040 aa9.64□□□□□ -0.87
SYNGAP1-211ENST00000636116 HDAC9Q9UKV0 1011 aa9.64□□□□□ -0.87
SYNGAP1-211ENST00000636116 MYBBP1AQ9BQG0 1328 aaKnown RBP9.63□□□□□ -0.87
SYNGAP1-211ENST00000636116 HSP90B1P14625 803 aaKnown RBP9.63□□□□□ -0.87
SYNGAP1-211ENST00000636116 ATP2B4P23634 1241 aa9.63□□□□□ -0.87
SYNGAP1-211ENST00000636116 PODNQ7Z5L7 613 aa9.63□□□□□ -0.87
SYNGAP1-211ENST00000636116 TXNRD3Q86VQ6 643 aa9.63□□□□□ -0.87
SYNGAP1-211ENST00000636116 REM2Q8IYK8 340 aaPredicted RBP9.63□□□□□ -0.87
SYNGAP1-211ENST00000636116 METTL22Q9BUU2 404 aaPredicted RBP9.63□□□□□ -0.87
SYNGAP1-211ENST00000636116 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.63□□□□□ -0.87
SYNGAP1-211ENST00000636116 MINPP1Q9UNW1 487 aa9.63□□□□□ -0.87
SYNGAP1-211ENST00000636116 PITPNM2Q9BZ72 1349 aa9.62□□□□□ -0.87
SYNGAP1-211ENST00000636116 GPR25O00155 361 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms