RNA–Protein interactions for RNA: ENST00000635652.1

PTPN11-206, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 3

Gene PTPN11, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-206ENST00000635652 ANP32CO43423 234 aa16.2■□□□□ 0.18
PTPN11-206ENST00000635652 ECE2O60344 883 aa16.2■□□□□ 0.18
PTPN11-206ENST00000635652 HIRAP54198 1017 aaPredicted RBP16.2■□□□□ 0.18
PTPN11-206ENST00000635652 NEXNQ0ZGT2 675 aa16.2■□□□□ 0.18
PTPN11-206ENST00000635652 TRPM4Q8TD43 1214 aa16.2■□□□□ 0.18
PTPN11-206ENST00000635652 ZC3H15Q8WU90 426 aaKnown RBP16.2■□□□□ 0.18
PTPN11-206ENST00000635652 GLIS2Q9BZE0 524 aaPredicted RBP16.2■□□□□ 0.18
PTPN11-206ENST00000635652 SALL2Q9Y467 1007 aaPredicted RBP16.2■□□□□ 0.18
PTPN11-206ENST00000635652 UFL1O94874 794 aa16.19■□□□□ 0.18
PTPN11-206ENST00000635652 CELF2O95319 508 aaKnown RBP16.19■□□□□ 0.18
PTPN11-206ENST00000635652 SLC4A2P04920 1241 aa16.19■□□□□ 0.18
PTPN11-206ENST00000635652 CTCFP49711 727 aaPredicted RBP16.19■□□□□ 0.18
PTPN11-206ENST00000635652 DPF2Q92785 391 aa16.19■□□□□ 0.18
PTPN11-206ENST00000635652 ZNF408Q9H9D4 720 aa16.19■□□□□ 0.18
PTPN11-206ENST00000635652 KCNQ5Q9NR82 932 aa16.19■□□□□ 0.18
PTPN11-206ENST00000635652 WBP1LQ9NX94 342 aa16.19■□□□□ 0.18
PTPN11-206ENST00000635652 PODXL2Q9NZ53 605 aa16.19■□□□□ 0.18
PTPN11-206ENST00000635652 PGAP2Q9UHJ9 254 aa16.19■□□□□ 0.18
PTPN11-206ENST00000635652 GGA1Q9UJY5 639 aa16.19■□□□□ 0.18
PTPN11-206ENST00000635652 IGKV5-2P06315 115 aa16.18■□□□□ 0.18
PTPN11-206ENST00000635652 ECE1P42892 770 aa16.18■□□□□ 0.18
PTPN11-206ENST00000635652 MAP2K1Q02750 393 aaPredicted RBP16.18■□□□□ 0.18
PTPN11-206ENST00000635652 TBC1D10BQ4KMP7 808 aaPredicted RBP16.18■□□□□ 0.18
PTPN11-206ENST00000635652 CYP4F22Q6NT55 531 aa16.18■□□□□ 0.18
PTPN11-206ENST00000635652 CDC37L1Q7L3B6 337 aa16.18■□□□□ 0.18
PTPN11-206ENST00000635652 SAMD7Q7Z3H4 446 aa16.18■□□□□ 0.18
PTPN11-206ENST00000635652 ANKRD18AQ8IVF6 992 aa16.18■□□□□ 0.18
PTPN11-206ENST00000635652 CAPNS2Q96L46 248 aa16.18■□□□□ 0.18
PTPN11-206ENST00000635652 POLR2AP24928 1970 aaKnown RBP16.18■□□□□ 0.18
PTPN11-206ENST00000635652 IL16Q14005 1332 aa16.18■□□□□ 0.18
PTPN11-206ENST00000635652 CTSWP56202 376 aa16.17■□□□□ 0.18
PTPN11-206ENST00000635652 CWF19L2Q2TBE0 894 aaKnown RBP16.17■□□□□ 0.18
PTPN11-206ENST00000635652 RBM26Q5T8P6 1007 aaKnown RBP16.17■□□□□ 0.18
PTPN11-206ENST00000635652 G2E3Q7L622 706 aa16.17■□□□□ 0.18
PTPN11-206ENST00000635652 TLL2Q9Y6L7 1015 aa16.17■□□□□ 0.18
PTPN11-206ENST00000635652 ZNF316A6NFI3 1004 aaPredicted RBP16.16■□□□□ 0.18
PTPN11-206ENST00000635652 RPS12P25398 132 aaKnown RBP16.16■□□□□ 0.18
PTPN11-206ENST00000635652 LBX1P52954 281 aa16.16■□□□□ 0.18
PTPN11-206ENST00000635652 USP48Q86UV5 1035 aa16.16■□□□□ 0.18
PTPN11-206ENST00000635652 CDC5LQ99459 802 aaKnown RBP16.16■□□□□ 0.18
PTPN11-206ENST00000635652 PRDM10Q9NQV6 1147 aa16.16■□□□□ 0.18
PTPN11-206ENST00000635652 MYH3P11055 1940 aa16.15■□□□□ 0.18
PTPN11-206ENST00000635652 RTL9Q8NET4 1388 aa16.15■□□□□ 0.18
PTPN11-206ENST00000635652 NEURL1BA8MQ27 555 aa16.15■□□□□ 0.18
PTPN11-206ENST00000635652 SAPCD2Q86UD0 394 aa16.15■□□□□ 0.18
PTPN11-206ENST00000635652 TTLL11Q8NHH1 800 aa16.15■□□□□ 0.18
PTPN11-206ENST00000635652 BEGAINQ9BUH8 593 aa16.15■□□□□ 0.18
PTPN11-206ENST00000635652 XDHP47989 1333 aa16.15■□□□□ 0.18
PTPN11-206ENST00000635652 SCN9AQ15858 1988 aa16.15■□□□□ 0.18
PTPN11-206ENST00000635652 FKBP5Q13451 457 aaPredicted RBP16.14■□□□□ 0.17
PTPN11-206ENST00000635652 NCBP3Q53F19 620 aaKnown RBP16.14■□□□□ 0.17
PTPN11-206ENST00000635652 UBE3BQ7Z3V4 1068 aa16.14■□□□□ 0.17
PTPN11-206ENST00000635652 GREM2Q9H772 168 aa16.14■□□□□ 0.17
PTPN11-206ENST00000635652 CACNA1FO60840 1977 aa16.14■□□□□ 0.17
PTPN11-206ENST00000635652 FANCIQ9NVI1 1328 aa16.14■□□□□ 0.17
PTPN11-206ENST00000635652 EGFRP00533 1210 aa16.13■□□□□ 0.17
PTPN11-206ENST00000635652 VIL1P09327 827 aaKnown RBP16.13■□□□□ 0.17
PTPN11-206ENST00000635652 ATP2B4P23634 1241 aa16.13■□□□□ 0.17
PTPN11-206ENST00000635652 FLIIQ13045 1269 aa16.13■□□□□ 0.17
PTPN11-206ENST00000635652 KRT26Q7Z3Y9 468 aa16.13■□□□□ 0.17
PTPN11-206ENST00000635652 WDR63Q8IWG1 891 aa16.13■□□□□ 0.17
PTPN11-206ENST00000635652 DCPSQ96C86 337 aaKnown RBP16.13■□□□□ 0.17
PTPN11-206ENST00000635652 SPEF2Q9C093 1822 aa16.12■□□□□ 0.17
PTPN11-206ENST00000635652 H7C1W4 665 aa16.12■□□□□ 0.17
PTPN11-206ENST00000635652 AOC2O75106 756 aa16.12■□□□□ 0.17
PTPN11-206ENST00000635652 HSPA8P11142 646 aaKnown RBP16.12■□□□□ 0.17
PTPN11-206ENST00000635652 DLK2Q6UY11 383 aa16.12■□□□□ 0.17
PTPN11-206ENST00000635652 MYH16Q9H6N6 1097 aa16.12■□□□□ 0.17
PTPN11-206ENST00000635652 BSDC1Q9NW68 430 aaPredicted RBP16.12■□□□□ 0.17
PTPN11-206ENST00000635652 MAP2K2P36507 400 aa16.11■□□□□ 0.17
PTPN11-206ENST00000635652 EXOSC9Q06265 439 aaKnown RBP16.11■□□□□ 0.17
PTPN11-206ENST00000635652 GCKRQ14397 625 aa16.11■□□□□ 0.17
PTPN11-206ENST00000635652 KIF4BQ2VIQ3 1234 aa16.11■□□□□ 0.17
PTPN11-206ENST00000635652 RSBN1LQ6PCB5 846 aaPredicted RBP16.11■□□□□ 0.17
PTPN11-206ENST00000635652 DNAAF4Q8WXU2 420 aa16.11■□□□□ 0.17
PTPN11-206ENST00000635652 MINPP1Q9UNW1 487 aa16.11■□□□□ 0.17
PTPN11-206ENST00000635652 WTIPA6NIX2 430 aaPredicted RBP16.1■□□□□ 0.17
PTPN11-206ENST00000635652 VAMP4O75379 141 aa16.1■□□□□ 0.17
PTPN11-206ENST00000635652 IGHMBP2P38935 993 aaKnown RBP16.1■□□□□ 0.17
PTPN11-206ENST00000635652 HUNKP57058 714 aa16.1■□□□□ 0.17
PTPN11-206ENST00000635652 PODNQ7Z5L7 613 aa16.1■□□□□ 0.17
PTPN11-206ENST00000635652 FAM9BQ8IZU0 186 aa16.1■□□□□ 0.17
PTPN11-206ENST00000635652 HHIPL1Q96JK4 782 aa16.1■□□□□ 0.17
PTPN11-206ENST00000635652 USP17L3A6NCW0 530 aa16.09■□□□□ 0.17
PTPN11-206ENST00000635652 USP17L4A6NCW7 530 aa16.09■□□□□ 0.17
PTPN11-206ENST00000635652 ADM5C9JUS6 153 aa16.09■□□□□ 0.17
PTPN11-206ENST00000635652 CCT4P50991 539 aaKnown RBP16.09■□□□□ 0.17
PTPN11-206ENST00000635652 USP17L1Q7RTZ2 530 aa16.09■□□□□ 0.17
PTPN11-206ENST00000635652 SULF1Q8IWU6 871 aa16.09■□□□□ 0.17
PTPN11-206ENST00000635652 AGBL3Q8NEM8 1001 aa16.09■□□□□ 0.17
PTPN11-206ENST00000635652 LINS1Q8NG48 757 aa16.09■□□□□ 0.17
PTPN11-206ENST00000635652 USP17L8P0C7I0 530 aa16.08■□□□□ 0.16
PTPN11-206ENST00000635652 ITGA6P23229 1130 aa16.08■□□□□ 0.16
PTPN11-206ENST00000635652 C2orf69Q8N8R5 385 aa16.08■□□□□ 0.16
PTPN11-206ENST00000635652 FBXW7Q969H0 707 aa16.08■□□□□ 0.16
PTPN11-206ENST00000635652 MPHOSPH8Q99549 860 aa16.08■□□□□ 0.16
PTPN11-206ENST00000635652 GGA3Q9NZ52 723 aa16.08■□□□□ 0.16
PTPN11-206ENST00000635652 THSD7BQ9C0I4 1608 aa16.08■□□□□ 0.16
PTPN11-206ENST00000635652 PSME4Q14997 1843 aa16.08■□□□□ 0.16
PTPN11-206ENST00000635652 ZNF280AP59817 542 aaPredicted RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms