RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 NOP58Q9Y2X3 529 aaKnown RBP17.87■□□□□ 0.45
LINC00339-208ENST00000634934 ARFGEF1Q9Y6D6 1849 aa17.86■□□□□ 0.45
LINC00339-208ENST00000634934 BBOX1O75936 387 aa17.86■□□□□ 0.45
LINC00339-208ENST00000634934 HSP90AB4PQ58FF6 505 aa17.86■□□□□ 0.45
LINC00339-208ENST00000634934 DCAF8L1A6NGE4 600 aa17.85■□□□□ 0.45
LINC00339-208ENST00000634934 PPEF1O14829 653 aaPredicted RBP17.85■□□□□ 0.45
LINC00339-208ENST00000634934 CIAO1O76071 339 aa17.85■□□□□ 0.45
LINC00339-208ENST00000634934 GCC1Q96CN9 775 aa17.85■□□□□ 0.45
LINC00339-208ENST00000634934 BCL11AQ9H165 835 aa17.85■□□□□ 0.45
LINC00339-208ENST00000634934 BSDC1Q9NW68 430 aaPredicted RBP17.85■□□□□ 0.45
LINC00339-208ENST00000634934 COL4A1P02462 1669 aa17.84■□□□□ 0.45
LINC00339-208ENST00000634934 SLX4Q8IY92 1834 aa17.84■□□□□ 0.45
LINC00339-208ENST00000634934 IL15P40933 162 aaPredicted RBP17.84■□□□□ 0.45
LINC00339-208ENST00000634934 DALRD3Q5D0E6 543 aaKnown RBP17.84■□□□□ 0.45
LINC00339-208ENST00000634934 ATG9AQ7Z3C6 839 aa17.84■□□□□ 0.45
LINC00339-208ENST00000634934 TTLL6Q8N841 843 aa17.84■□□□□ 0.45
LINC00339-208ENST00000634934 FBXO3Q9UK99 471 aa17.84■□□□□ 0.45
LINC00339-208ENST00000634934 TAF1P21675 1872 aa17.84■□□□□ 0.45
LINC00339-208ENST00000634934 RAB11FIP3O75154 756 aa17.83■□□□□ 0.45
LINC00339-208ENST00000634934 METTL24Q5JXM2 366 aa17.83■□□□□ 0.45
LINC00339-208ENST00000634934 PRPF40BQ6NWY9 871 aaKnown RBP17.83■□□□□ 0.45
LINC00339-208ENST00000634934 ERC1Q8IUD2 1116 aa17.83■□□□□ 0.45
LINC00339-208ENST00000634934 ZNF219Q9P2Y4 722 aaPredicted RBP17.83■□□□□ 0.45
LINC00339-208ENST00000634934 RIPOR2Q9Y4F9 1068 aa17.83■□□□□ 0.45
LINC00339-208ENST00000634934 CENPQQ7L2Z9 268 aaPredicted RBP17.82■□□□□ 0.44
LINC00339-208ENST00000634934 SMC5Q8IY18 1101 aa17.82■□□□□ 0.44
LINC00339-208ENST00000634934 KDM2BQ8NHM5 1336 aa17.82■□□□□ 0.44
LINC00339-208ENST00000634934 TFCP2Q12800 502 aa17.82■□□□□ 0.44
LINC00339-208ENST00000634934 ANKRD45Q5TZF3 282 aa17.82■□□□□ 0.44
LINC00339-208ENST00000634934 TMC4Q7Z404 712 aa17.82■□□□□ 0.44
LINC00339-208ENST00000634934 SLC51AQ86UW1 340 aa17.82■□□□□ 0.44
LINC00339-208ENST00000634934 HELBQ8NG08 1087 aaPredicted RBP17.82■□□□□ 0.44
LINC00339-208ENST00000634934 TMX4Q9H1E5 349 aaPredicted RBP17.82■□□□□ 0.44
LINC00339-208ENST00000634934 CEP126Q9P2H0 1117 aa17.82■□□□□ 0.44
LINC00339-208ENST00000634934 ZBTB47Q9UFB7 747 aaPredicted RBP17.82■□□□□ 0.44
LINC00339-208ENST00000634934 MINPP1Q9UNW1 487 aa17.82■□□□□ 0.44
LINC00339-208ENST00000634934 MROH5Q6ZUA9 1318 aa17.81■□□□□ 0.44
LINC00339-208ENST00000634934 SASH1O94885 1247 aa17.81■□□□□ 0.44
LINC00339-208ENST00000634934 CHRNDQ07001 517 aa17.81■□□□□ 0.44
LINC00339-208ENST00000634934 RHPN1Q8TCX5 695 aa17.81■□□□□ 0.44
LINC00339-208ENST00000634934 KIF1BPQ96EK5 621 aa17.81■□□□□ 0.44
LINC00339-208ENST00000634934 LRRCC1Q9C099 1032 aa17.81■□□□□ 0.44
LINC00339-208ENST00000634934 ATP6V0A2Q9Y487 856 aa17.81■□□□□ 0.44
LINC00339-208ENST00000634934 SMARCA5O60264 1052 aaPredicted RBP17.8■□□□□ 0.44
LINC00339-208ENST00000634934 SP8Q8IXZ3 490 aa17.8■□□□□ 0.44
LINC00339-208ENST00000634934 IL1RAPL2Q9NP60 686 aa17.8■□□□□ 0.44
LINC00339-208ENST00000634934 SPEF2Q9C093 1822 aa17.79■□□□□ 0.44
LINC00339-208ENST00000634934 GRIN3BO60391 1043 aa17.79■□□□□ 0.44
LINC00339-208ENST00000634934 TAF5LO75529 589 aa17.79■□□□□ 0.44
LINC00339-208ENST00000634934 OLFM4Q6UX06 510 aa17.79■□□□□ 0.44
LINC00339-208ENST00000634934 ANKRD2Q9GZV1 360 aa17.79■□□□□ 0.44
LINC00339-208ENST00000634934 ANKIB1Q9P2G1 1089 aa17.79■□□□□ 0.44
LINC00339-208ENST00000634934 C21orf2O43822 256 aa17.78■□□□□ 0.44
LINC00339-208ENST00000634934 NSFL1CQ9UNZ2 370 aaKnown RBP17.78■□□□□ 0.44
LINC00339-208ENST00000634934 CHD4Q14839 1912 aa17.78■□□□□ 0.44
LINC00339-208ENST00000634934 PDE8BO95263 885 aa17.77■□□□□ 0.44
LINC00339-208ENST00000634934 GPSM2P81274 684 aa17.77■□□□□ 0.44
LINC00339-208ENST00000634934 ARHGAP27Q6ZUM4 889 aa17.77■□□□□ 0.44
LINC00339-208ENST00000634934 ERICH6Q7L0X2 663 aa17.77■□□□□ 0.44
LINC00339-208ENST00000634934 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.77■□□□□ 0.44
LINC00339-208ENST00000634934 KCNJ4P48050 445 aa17.77■□□□□ 0.43
LINC00339-208ENST00000634934 NUCB1Q02818 461 aa17.77■□□□□ 0.43
LINC00339-208ENST00000634934 CLASRPQ8N2M8 674 aaKnown RBP17.77■□□□□ 0.43
LINC00339-208ENST00000634934 VGLL2Q8N8G2 317 aa17.77■□□□□ 0.43
LINC00339-208ENST00000634934 C7orf43Q8WVR3 580 aa17.77■□□□□ 0.43
LINC00339-208ENST00000634934 LNPKQ9C0E8 428 aa17.77■□□□□ 0.43
LINC00339-208ENST00000634934 XDHP47989 1333 aa17.76■□□□□ 0.43
LINC00339-208ENST00000634934 CHD1LQ86WJ1 897 aa17.76■□□□□ 0.43
LINC00339-208ENST00000634934 AKAP2Q9Y2D5 859 aa17.76■□□□□ 0.43
LINC00339-208ENST00000634934 SNAP23O00161 211 aa17.75■□□□□ 0.43
LINC00339-208ENST00000634934 PUM3Q15397 648 aaKnown RBP17.75■□□□□ 0.43
LINC00339-208ENST00000634934 ATP2B3Q16720 1220 aa17.75■□□□□ 0.43
LINC00339-208ENST00000634934 TNNI3KQ59H18 835 aa17.75■□□□□ 0.43
LINC00339-208ENST00000634934 DPP8Q6V1X1 898 aaPredicted RBP17.75■□□□□ 0.43
LINC00339-208ENST00000634934 AACSQ86V21 672 aa17.75■□□□□ 0.43
LINC00339-208ENST00000634934 MPNDQ8N594 471 aa17.75■□□□□ 0.43
LINC00339-208ENST00000634934 NEUROD6Q96NK8 337 aa17.75■□□□□ 0.43
LINC00339-208ENST00000634934 FPGT-TNNI3KV9GXZ4 949 aa17.75■□□□□ 0.43
LINC00339-208ENST00000634934 FER1L6Q2WGJ9 1857 aa17.75■□□□□ 0.43
LINC00339-208ENST00000634934 UFL1O94874 794 aa17.74■□□□□ 0.43
LINC00339-208ENST00000634934 TIMM10P62072 90 aa17.74■□□□□ 0.43
LINC00339-208ENST00000634934 RASSF7Q02833 373 aa17.74■□□□□ 0.43
LINC00339-208ENST00000634934 CC2D2BQ6DHV5 1058 aa17.74■□□□□ 0.43
LINC00339-208ENST00000634934 GPR108Q9NPR9 543 aa17.74■□□□□ 0.43
LINC00339-208ENST00000634934 GGA1Q9UJY5 639 aa17.74■□□□□ 0.43
LINC00339-208ENST00000634934 A0A1B0GUL7 405 aa17.73■□□□□ 0.43
LINC00339-208ENST00000634934 WTIPA6NIX2 430 aaPredicted RBP17.73■□□□□ 0.43
LINC00339-208ENST00000634934 C6orf229H3BNL8 230 aa17.73■□□□□ 0.43
LINC00339-208ENST00000634934 IFIT2P09913 472 aaKnown RBP17.73■□□□□ 0.43
LINC00339-208ENST00000634934 ANP32AP39687 249 aaKnown RBP17.73■□□□□ 0.43
LINC00339-208ENST00000634934 CCDC93Q567U6 631 aa17.73■□□□□ 0.43
LINC00339-208ENST00000634934 SOGA3Q5TF21 947 aa17.73■□□□□ 0.43
LINC00339-208ENST00000634934 EAF2Q96CJ1 260 aaPredicted RBP17.73■□□□□ 0.43
LINC00339-208ENST00000634934 CCDC8Q9H0W5 538 aaPredicted RBP17.73■□□□□ 0.43
LINC00339-208ENST00000634934 PODXL2Q9NZ53 605 aa17.73■□□□□ 0.43
LINC00339-208ENST00000634934 SBF1O95248 1867 aa17.73■□□□□ 0.43
LINC00339-208ENST00000634934 ZNF804BA4D1E1 1349 aa17.73■□□□□ 0.43
LINC00339-208ENST00000634934 SLC5A1P13866 664 aa17.72■□□□□ 0.43
LINC00339-208ENST00000634934 ATP2B4P23634 1241 aa17.72■□□□□ 0.43
LINC00339-208ENST00000634934 UBE4AQ14139 1066 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms