RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 IFIT5Q13325 482 aaKnown RBP19.81■□□□□ 0.76
LINC00339-207ENST00000634712 NOB1Q9ULX3 412 aaKnown RBP19.81■□□□□ 0.76
LINC00339-207ENST00000634712 ATP2B4P23634 1241 aa19.8■□□□□ 0.76
LINC00339-207ENST00000634712 RARSP54136 660 aaKnown RBP19.8■□□□□ 0.76
LINC00339-207ENST00000634712 FOXO4P98177 505 aa19.8■□□□□ 0.76
LINC00339-207ENST00000634712 TNIP1Q15025 636 aa19.8■□□□□ 0.76
LINC00339-207ENST00000634712 LMBR1LQ6UX01 489 aa19.8■□□□□ 0.76
LINC00339-207ENST00000634712 MINPP1Q9UNW1 487 aa19.8■□□□□ 0.76
LINC00339-207ENST00000634712 COL4A1P02462 1669 aa19.79■□□□□ 0.76
LINC00339-207ENST00000634712 COL4A5P29400 1685 aa19.79■□□□□ 0.76
LINC00339-207ENST00000634712 CXCL9Q07325 125 aa19.79■□□□□ 0.76
LINC00339-207ENST00000634712 CCDC57Q2TAC2 916 aa19.79■□□□□ 0.76
LINC00339-207ENST00000634712 TAF7LQ5H9L4 462 aa19.79■□□□□ 0.76
LINC00339-207ENST00000634712 CIAPIN1Q6FI81 312 aa19.79■□□□□ 0.76
LINC00339-207ENST00000634712 API5Q9BZZ5 524 aaKnown RBP19.79■□□□□ 0.76
LINC00339-207ENST00000634712 TAF1DQ9H5J8 278 aaPredicted RBP19.79■□□□□ 0.76
LINC00339-207ENST00000634712 RAD17O75943 681 aa19.78■□□□□ 0.76
LINC00339-207ENST00000634712 BRPF1P55201 1214 aaPredicted RBP19.78■□□□□ 0.76
LINC00339-207ENST00000634712 EAPPQ56P03 285 aaPredicted RBP19.78■□□□□ 0.76
LINC00339-207ENST00000634712 GPR101Q96P66 508 aaPredicted RBP19.78■□□□□ 0.76
LINC00339-207ENST00000634712 DBNDD1Q9H9R9 158 aa19.78■□□□□ 0.76
LINC00339-207ENST00000634712 NBPF7P0C2Y1 421 aaPredicted RBP19.77■□□□□ 0.76
LINC00339-207ENST00000634712 EPHX2P34913 555 aa19.77■□□□□ 0.76
LINC00339-207ENST00000634712 DOK7Q18PE1 504 aa19.77■□□□□ 0.76
LINC00339-207ENST00000634712 PNMA8AQ86V59 439 aaPredicted RBP19.77■□□□□ 0.76
LINC00339-207ENST00000634712 ANKRD2Q9GZV1 360 aa19.77■□□□□ 0.76
LINC00339-207ENST00000634712 CLEC11AQ9Y240 323 aa19.77■□□□□ 0.76
LINC00339-207ENST00000634712 SCN4AP35499 1836 aa19.77■□□□□ 0.75
LINC00339-207ENST00000634712 KIF16BQ96L93 1317 aa19.76■□□□□ 0.75
LINC00339-207ENST00000634712 CCT4P50991 539 aaKnown RBP19.76■□□□□ 0.75
LINC00339-207ENST00000634712 EPHA10Q5JZY3 1008 aa19.76■□□□□ 0.75
LINC00339-207ENST00000634712 SUCLG2Q96I99 432 aa19.76■□□□□ 0.75
LINC00339-207ENST00000634712 DUOX1Q9NRD9 1551 aa19.76■□□□□ 0.75
LINC00339-207ENST00000634712 UTYO14607 1347 aa19.76■□□□□ 0.75
LINC00339-207ENST00000634712 ZBED9Q6R2W3 1325 aa19.76■□□□□ 0.75
LINC00339-207ENST00000634712 IPO8O15397 1037 aaKnown RBP19.75■□□□□ 0.75
LINC00339-207ENST00000634712 ECE2O60344 883 aa19.75■□□□□ 0.75
LINC00339-207ENST00000634712 CHADLQ6NUI6 762 aa19.75■□□□□ 0.75
LINC00339-207ENST00000634712 YDJCA8MPS7 323 aa19.74■□□□□ 0.75
LINC00339-207ENST00000634712 KCNJ4P48050 445 aa19.74■□□□□ 0.75
LINC00339-207ENST00000634712 APLP1P51693 650 aa19.74■□□□□ 0.75
LINC00339-207ENST00000634712 LDHDQ86WU2 507 aa19.74■□□□□ 0.75
LINC00339-207ENST00000634712 ARHGAP45Q92619 1136 aa19.74■□□□□ 0.75
LINC00339-207ENST00000634712 LEMD3Q9Y2U8 911 aa19.74■□□□□ 0.75
LINC00339-207ENST00000634712 SCNN1DP51172 638 aa19.73■□□□□ 0.75
LINC00339-207ENST00000634712 LDHAL6AQ6ZMR3 332 aa19.73■□□□□ 0.75
LINC00339-207ENST00000634712 USP44Q9H0E7 712 aa19.73■□□□□ 0.75
LINC00339-207ENST00000634712 SPEF2Q9C093 1822 aa19.73■□□□□ 0.75
LINC00339-207ENST00000634712 POTEIP0CG38 1075 aa19.72■□□□□ 0.75
LINC00339-207ENST00000634712 POTEJP0CG39 1038 aa19.72■□□□□ 0.75
LINC00339-207ENST00000634712 EPS15P42566 896 aa19.72■□□□□ 0.75
LINC00339-207ENST00000634712 GMPSP49915 693 aaPredicted RBP19.72■□□□□ 0.75
LINC00339-207ENST00000634712 CHRNDQ07001 517 aa19.72■□□□□ 0.75
LINC00339-207ENST00000634712 FRAT1Q92837 279 aaPredicted RBP19.72■□□□□ 0.75
LINC00339-207ENST00000634712 BICC1Q9H694 974 aaKnown RBP19.72■□□□□ 0.75
LINC00339-207ENST00000634712 CNNM1Q9NRU3 951 aa19.72■□□□□ 0.75
LINC00339-207ENST00000634712 ZNF594Q96JF6 807 aaPredicted RBP19.71■□□□□ 0.75
LINC00339-207ENST00000634712 GPRC5DQ9NZD1 345 aa19.71■□□□□ 0.75
LINC00339-207ENST00000634712 HDAC5Q9UQL6 1122 aa19.71■□□□□ 0.75
LINC00339-207ENST00000634712 LTBP1Q14766 1721 aa19.71■□□□□ 0.75
LINC00339-207ENST00000634712 ZNF804BA4D1E1 1349 aa19.71■□□□□ 0.75
LINC00339-207ENST00000634712 PSMD14O00487 310 aa19.7■□□□□ 0.74
LINC00339-207ENST00000634712 BCAR3O75815 825 aa19.7■□□□□ 0.74
LINC00339-207ENST00000634712 USP50Q70EL3 339 aaPredicted RBP19.7■□□□□ 0.74
LINC00339-207ENST00000634712 KAZALD1Q96I82 304 aa19.7■□□□□ 0.74
LINC00339-207ENST00000634712 ADARB2Q9NS39 739 aaKnown RBP19.7■□□□□ 0.74
LINC00339-207ENST00000634712 H7C1D1 291 aa19.7■□□□□ 0.74
LINC00339-207ENST00000634712 UBTFL1P0CB47 393 aaPredicted RBP19.7■□□□□ 0.74
LINC00339-207ENST00000634712 PODNQ7Z5L7 613 aa19.7■□□□□ 0.74
LINC00339-207ENST00000634712 MED23Q9ULK4 1368 aa19.69■□□□□ 0.74
LINC00339-207ENST00000634712 WTIPA6NIX2 430 aaPredicted RBP19.69■□□□□ 0.74
LINC00339-207ENST00000634712 PLIN1O60240 522 aa19.69■□□□□ 0.74
LINC00339-207ENST00000634712 HELBQ8NG08 1087 aaPredicted RBP19.69■□□□□ 0.74
LINC00339-207ENST00000634712 KCNQ5Q9NR82 932 aa19.69■□□□□ 0.74
LINC00339-207ENST00000634712 CNOT7Q9UIV1 285 aaKnown RBP19.69■□□□□ 0.74
LINC00339-207ENST00000634712 ZBTB12Q9Y330 459 aaPredicted RBP19.69■□□□□ 0.74
LINC00339-207ENST00000634712 TAF5LO75529 589 aa19.68■□□□□ 0.74
LINC00339-207ENST00000634712 RPS12P25398 132 aaKnown RBP19.68■□□□□ 0.74
LINC00339-207ENST00000634712 RABL6Q3YEC7 729 aaPredicted RBP19.68■□□□□ 0.74
LINC00339-207ENST00000634712 ATF7IPQ6VMQ6 1270 aa19.68■□□□□ 0.74
LINC00339-207ENST00000634712 DPF2Q92785 391 aa19.68■□□□□ 0.74
LINC00339-207ENST00000634712 ANKRD44Q8N8A2 993 aa19.67■□□□□ 0.74
LINC00339-207ENST00000634712 COA1Q9GZY4 146 aa19.67■□□□□ 0.74
LINC00339-207ENST00000634712 VIL1P09327 827 aaKnown RBP19.66■□□□□ 0.74
LINC00339-207ENST00000634712 ZKSCAN2Q63HK3 967 aa19.66■□□□□ 0.74
LINC00339-207ENST00000634712 INTS3Q68E01 1043 aaKnown RBP19.66■□□□□ 0.74
LINC00339-207ENST00000634712 MICALL2Q8IY33 904 aa19.66■□□□□ 0.74
LINC00339-207ENST00000634712 CNTROBQ8N137 903 aa19.66■□□□□ 0.74
LINC00339-207ENST00000634712 USP17L3A6NCW0 530 aa19.65■□□□□ 0.74
LINC00339-207ENST00000634712 USP17L4A6NCW7 530 aa19.65■□□□□ 0.74
LINC00339-207ENST00000634712 TRIM27P14373 513 aa19.65■□□□□ 0.74
LINC00339-207ENST00000634712 MAP1SQ66K74 1059 aaPredicted RBP19.65■□□□□ 0.74
LINC00339-207ENST00000634712 USP17L1Q7RTZ2 530 aa19.65■□□□□ 0.74
LINC00339-207ENST00000634712 FBXW7Q969H0 707 aa19.65■□□□□ 0.74
LINC00339-207ENST00000634712 CLUAP1Q96AJ1 413 aa19.65■□□□□ 0.74
LINC00339-207ENST00000634712 GNAI3P08754 354 aa19.64■□□□□ 0.73
LINC00339-207ENST00000634712 TXNRD3Q86VQ6 643 aa19.64■□□□□ 0.73
LINC00339-207ENST00000634712 PUS3Q9BZE2 481 aaKnown RBP19.64■□□□□ 0.73
LINC00339-207ENST00000634712 RSBN1LQ6PCB5 846 aaPredicted RBP19.63■□□□□ 0.73
LINC00339-207ENST00000634712 AGBL3Q8NEM8 1001 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms