RNA–Protein interactions for RNA: ENST00000629088.1

PNKP-222, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-222ENST00000629088 EYA3Q99504 573 aa20.39■□□□□ 0.85
PNKP-222ENST00000629088 MYD88Q99836 296 aa20.39■□□□□ 0.85
PNKP-222ENST00000629088 DBNDD1Q9H9R9 158 aa20.39■□□□□ 0.85
PNKP-222ENST00000629088 CWC25Q9NXE8 425 aaPredicted RBP20.39■□□□□ 0.85
PNKP-222ENST00000629088 RIMBP2O15034 1052 aa20.38■□□□□ 0.85
PNKP-222ENST00000629088 CA12O43570 354 aa20.38■□□□□ 0.85
PNKP-222ENST00000629088 GPSM2P81274 684 aa20.38■□□□□ 0.85
PNKP-222ENST00000629088 CCDC152Q4G0S7 254 aa20.38■□□□□ 0.85
PNKP-222ENST00000629088 SAMD7Q7Z3H4 446 aa20.38■□□□□ 0.85
PNKP-222ENST00000629088 DPF2Q92785 391 aa20.38■□□□□ 0.85
PNKP-222ENST00000629088 PODXL2Q9NZ53 605 aa20.38■□□□□ 0.85
PNKP-222ENST00000629088 POLLQ9UGP5 575 aa20.38■□□□□ 0.85
PNKP-222ENST00000629088 IL16Q14005 1332 aa20.37■□□□□ 0.85
PNKP-222ENST00000629088 C6orf229H3BNL8 230 aa20.37■□□□□ 0.85
PNKP-222ENST00000629088 PDE8AO60658 829 aa20.37■□□□□ 0.85
PNKP-222ENST00000629088 TBC1D10BQ4KMP7 808 aaPredicted RBP20.37■□□□□ 0.85
PNKP-222ENST00000629088 ZIC5Q96T25 663 aa20.37■□□□□ 0.85
PNKP-222ENST00000629088 KCNQ5Q9NR82 932 aa20.37■□□□□ 0.85
PNKP-222ENST00000629088 EGFRP00533 1210 aa20.36■□□□□ 0.85
PNKP-222ENST00000629088 ZEB1P37275 1124 aaPredicted RBP20.36■□□□□ 0.85
PNKP-222ENST00000629088 DOK7Q18PE1 504 aa20.36■□□□□ 0.85
PNKP-222ENST00000629088 WWC1Q8IX03 1113 aa20.36■□□□□ 0.85
PNKP-222ENST00000629088 COL4A1P02462 1669 aa20.35■□□□□ 0.85
PNKP-222ENST00000629088 RPS12P25398 132 aaKnown RBP20.35■□□□□ 0.85
PNKP-222ENST00000629088 HUNKP57058 714 aa20.35■□□□□ 0.85
PNKP-222ENST00000629088 KSR2Q6VAB6 950 aa20.35■□□□□ 0.85
PNKP-222ENST00000629088 TSPYL6Q8N831 410 aa20.35■□□□□ 0.85
PNKP-222ENST00000629088 TBC1D16Q8TBP0 767 aa20.35■□□□□ 0.85
PNKP-222ENST00000629088 STK31Q9BXU1 1019 aa20.35■□□□□ 0.85
PNKP-222ENST00000629088 CCDC184Q52MB2 194 aa20.34■□□□□ 0.85
PNKP-222ENST00000629088 RBM26Q5T8P6 1007 aaKnown RBP20.34■□□□□ 0.85
PNKP-222ENST00000629088 KRT26Q7Z3Y9 468 aa20.34■□□□□ 0.85
PNKP-222ENST00000629088 MCOLN1Q9GZU1 580 aa20.34■□□□□ 0.85
PNKP-222ENST00000629088 MAP3K2Q9Y2U5 619 aa20.34■□□□□ 0.85
PNKP-222ENST00000629088 ECE2O60344 883 aa20.33■□□□□ 0.85
PNKP-222ENST00000629088 RGS19P49795 217 aa20.33■□□□□ 0.85
PNKP-222ENST00000629088 NOGQ13253 232 aa20.33■□□□□ 0.85
PNKP-222ENST00000629088 TSR2Q969E8 191 aaKnown RBP20.33■□□□□ 0.85
PNKP-222ENST00000629088 SEC31BQ9NQW1 1179 aa20.33■□□□□ 0.85
PNKP-222ENST00000629088 RTL9Q8NET4 1388 aa20.33■□□□□ 0.84
PNKP-222ENST00000629088 PI4KAP2A4QPH2 592 aa20.32■□□□□ 0.84
PNKP-222ENST00000629088 ADM5C9JUS6 153 aa20.32■□□□□ 0.84
PNKP-222ENST00000629088 MLLT1Q03111 559 aaPredicted RBP20.32■□□□□ 0.84
PNKP-222ENST00000629088 NEXNQ0ZGT2 675 aa20.32■□□□□ 0.84
PNKP-222ENST00000629088 TWISTNBQ3B726 338 aaPredicted RBP20.32■□□□□ 0.84
PNKP-222ENST00000629088 PI4KAP1Q8N8J0 262 aa20.32■□□□□ 0.84
PNKP-222ENST00000629088 ZC3H12CQ9C0D7 883 aaKnown RBP20.32■□□□□ 0.84
PNKP-222ENST00000629088 ZNF609O15014 1411 aa20.31■□□□□ 0.84
PNKP-222ENST00000629088 GBA2Q9HCG7 927 aaPredicted RBP20.31■□□□□ 0.84
PNKP-222ENST00000629088 ANKIB1Q9P2G1 1089 aa20.31■□□□□ 0.84
PNKP-222ENST00000629088 GGA1Q9UJY5 639 aa20.31■□□□□ 0.84
PNKP-222ENST00000629088 FAM155AB1AL88 458 aaPredicted RBP20.3■□□□□ 0.84
PNKP-222ENST00000629088 UFL1O94874 794 aa20.3■□□□□ 0.84
PNKP-222ENST00000629088 IGKV5-2P06315 115 aa20.3■□□□□ 0.84
PNKP-222ENST00000629088 CTSWP56202 376 aa20.3■□□□□ 0.84
PNKP-222ENST00000629088 RGMBQ6NW40 437 aa20.3■□□□□ 0.84
PNKP-222ENST00000629088 ANKRD18AQ8IVF6 992 aa20.3■□□□□ 0.84
PNKP-222ENST00000629088 DCPSQ96C86 337 aaKnown RBP20.3■□□□□ 0.84
PNKP-222ENST00000629088 CDC5LQ99459 802 aaKnown RBP20.3■□□□□ 0.84
PNKP-222ENST00000629088 XDHP47989 1333 aa20.29■□□□□ 0.84
PNKP-222ENST00000629088 VIL1P09327 827 aaKnown RBP20.29■□□□□ 0.84
PNKP-222ENST00000629088 DGKZQ13574 1117 aa20.29■□□□□ 0.84
PNKP-222ENST00000629088 C2orf69Q8N8R5 385 aa20.29■□□□□ 0.84
PNKP-222ENST00000629088 MRS2Q9HD23 443 aa20.29■□□□□ 0.84
PNKP-222ENST00000629088 KIF4BQ2VIQ3 1234 aa20.28■□□□□ 0.84
PNKP-222ENST00000629088 ASTN2O75129 1339 aaPredicted RBP20.27■□□□□ 0.84
PNKP-222ENST00000629088 NEURL1BA8MQ27 555 aa20.27■□□□□ 0.84
PNKP-222ENST00000629088 G3V3G9 751 aa20.27■□□□□ 0.84
PNKP-222ENST00000629088 ANP32CO43423 234 aa20.27■□□□□ 0.84
PNKP-222ENST00000629088 SLC4A2P04920 1241 aa20.27■□□□□ 0.84
PNKP-222ENST00000629088 KIF23Q02241 960 aaPredicted RBP20.27■□□□□ 0.84
PNKP-222ENST00000629088 DCAF8Q5TAQ9 597 aa20.27■□□□□ 0.84
PNKP-222ENST00000629088 WDR63Q8IWG1 891 aa20.27■□□□□ 0.84
PNKP-222ENST00000629088 TTLL11Q8NHH1 800 aa20.27■□□□□ 0.84
PNKP-222ENST00000629088 ATP2B4P23634 1241 aa20.26■□□□□ 0.83
PNKP-222ENST00000629088 ZNF157P51786 506 aaPredicted RBP20.26■□□□□ 0.83
PNKP-222ENST00000629088 JARID2Q92833 1246 aaPredicted RBP20.26■□□□□ 0.83
PNKP-222ENST00000629088 CCDC102AQ96A19 550 aa20.26■□□□□ 0.83
PNKP-222ENST00000629088 BSDC1Q9NW68 430 aaPredicted RBP20.26■□□□□ 0.83
PNKP-222ENST00000629088 GGA3Q9NZ52 723 aa20.26■□□□□ 0.83
PNKP-222ENST00000629088 MYH3P11055 1940 aa20.25■□□□□ 0.83
PNKP-222ENST00000629088 CASP8AP2Q9UKL3 1982 aa20.25■□□□□ 0.83
PNKP-222ENST00000629088 H7C1W4 665 aa20.25■□□□□ 0.83
PNKP-222ENST00000629088 FLIIQ13045 1269 aa20.25■□□□□ 0.83
PNKP-222ENST00000629088 CWF19L2Q2TBE0 894 aaKnown RBP20.25■□□□□ 0.83
PNKP-222ENST00000629088 SULF1Q8IWU6 871 aa20.25■□□□□ 0.83
PNKP-222ENST00000629088 AGBL3Q8NEM8 1001 aa20.25■□□□□ 0.83
PNKP-222ENST00000629088 CCDC85AQ96PX6 553 aaPredicted RBP20.25■□□□□ 0.83
PNKP-222ENST00000629088 PLA2G12BQ9BX93 195 aa20.25■□□□□ 0.83
PNKP-222ENST00000629088 FANCIQ9NVI1 1328 aa20.25■□□□□ 0.83
PNKP-222ENST00000629088 SLC34A2O95436 690 aa20.24■□□□□ 0.83
PNKP-222ENST00000629088 G2E3Q7L622 706 aa20.24■□□□□ 0.83
PNKP-222ENST00000629088 PODNQ7Z5L7 613 aa20.24■□□□□ 0.83
PNKP-222ENST00000629088 CACNA1FO60840 1977 aa20.24■□□□□ 0.83
PNKP-222ENST00000629088 SCN9AQ15858 1988 aa20.24■□□□□ 0.83
PNKP-222ENST00000629088 MED23Q9ULK4 1368 aa20.23■□□□□ 0.83
PNKP-222ENST00000629088 PSME4Q14997 1843 aa20.23■□□□□ 0.83
PNKP-222ENST00000629088 ZNF316A6NFI3 1004 aaPredicted RBP20.23■□□□□ 0.83
PNKP-222ENST00000629088 ZNF280AP59817 542 aaPredicted RBP20.23■□□□□ 0.83
PNKP-222ENST00000629088 RSBN1LQ6PCB5 846 aaPredicted RBP20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms