RNA–Protein interactions for RNA: ENST00000627960.1

UBR1-212, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5 BASIC

Gene UBR1, Length 189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-212ENST00000627960 ANKIB1Q9P2G1 1089 aa15.48■□□□□ 0.07
UBR1-212ENST00000627960 CNTNAP1P78357 1384 aa15.48■□□□□ 0.07
UBR1-212ENST00000627960 SPEF2Q9C093 1822 aa15.47■□□□□ 0.07
UBR1-212ENST00000627960 PSMD14O00487 310 aa15.47■□□□□ 0.07
UBR1-212ENST00000627960 ECE2O60344 883 aa15.47■□□□□ 0.07
UBR1-212ENST00000627960 DOK7Q18PE1 504 aa15.47■□□□□ 0.07
UBR1-212ENST00000627960 UBE3BQ7Z3V4 1068 aa15.47■□□□□ 0.07
UBR1-212ENST00000627960 CDC5LQ99459 802 aaKnown RBP15.47■□□□□ 0.07
UBR1-212ENST00000627960 CNOT7Q9UIV1 285 aaKnown RBP15.47■□□□□ 0.07
UBR1-212ENST00000627960 GGA1Q9UJY5 639 aa15.47■□□□□ 0.07
UBR1-212ENST00000627960 SCN9AQ15858 1988 aa15.47■□□□□ 0.07
UBR1-212ENST00000627960 RTL9Q8NET4 1388 aa15.47■□□□□ 0.07
UBR1-212ENST00000627960 PCNTO95613 3336 aa15.46■□□□□ 0.07
UBR1-212ENST00000627960 UFL1O94874 794 aa15.46■□□□□ 0.07
UBR1-212ENST00000627960 LINS1Q8NG48 757 aa15.46■□□□□ 0.07
UBR1-212ENST00000627960 DPF2Q92785 391 aa15.46■□□□□ 0.07
UBR1-212ENST00000627960 PLA2G12BQ9BX93 195 aa15.46■□□□□ 0.07
UBR1-212ENST00000627960 GREM2Q9H772 168 aa15.46■□□□□ 0.07
UBR1-212ENST00000627960 KCNQ5Q9NR82 932 aa15.46■□□□□ 0.07
UBR1-212ENST00000627960 PGAP2Q9UHJ9 254 aa15.46■□□□□ 0.07
UBR1-212ENST00000627960 ZBTB12Q9Y330 459 aaPredicted RBP15.46■□□□□ 0.07
UBR1-212ENST00000627960 XDHP47989 1333 aa15.45■□□□□ 0.06
UBR1-212ENST00000627960 HSPA1AP0DMV8 641 aaKnown RBP15.45■□□□□ 0.06
UBR1-212ENST00000627960 HSPA1BP0DMV9 641 aaKnown RBP15.45■□□□□ 0.06
UBR1-212ENST00000627960 HIRAP54198 1017 aaPredicted RBP15.45■□□□□ 0.06
UBR1-212ENST00000627960 CASP7P55210 303 aa15.45■□□□□ 0.06
UBR1-212ENST00000627960 FMR1Q06787 632 aaKnown RBP eCLIP15.45■□□□□ 0.06
UBR1-212ENST00000627960 ZC3H15Q8WU90 426 aaKnown RBP15.45■□□□□ 0.06
UBR1-212ENST00000627960 BSDC1Q9NW68 430 aaPredicted RBP15.45■□□□□ 0.06
UBR1-212ENST00000627960 POLR2AP24928 1970 aaKnown RBP15.45■□□□□ 0.06
UBR1-212ENST00000627960 ZNF521Q96K83 1311 aa15.44■□□□□ 0.06
UBR1-212ENST00000627960 SHTN1A0MZ66 631 aa15.44■□□□□ 0.06
UBR1-212ENST00000627960 H7C1D1 291 aa15.44■□□□□ 0.06
UBR1-212ENST00000627960 TRAF5O00463 557 aa15.44■□□□□ 0.06
UBR1-212ENST00000627960 ATP2B4P23634 1241 aa15.44■□□□□ 0.06
UBR1-212ENST00000627960 VEGFBP49765 207 aa15.44■□□□□ 0.06
UBR1-212ENST00000627960 DEFB115Q30KQ5 88 aa15.44■□□□□ 0.06
UBR1-212ENST00000627960 MICALL2Q8IY33 904 aa15.44■□□□□ 0.06
UBR1-212ENST00000627960 MINPP1Q9UNW1 487 aa15.44■□□□□ 0.06
UBR1-212ENST00000627960 PSME4Q14997 1843 aa15.44■□□□□ 0.06
UBR1-212ENST00000627960 RASSF10A6NK89 507 aa15.43■□□□□ 0.06
UBR1-212ENST00000627960 G3V3G9 751 aa15.43■□□□□ 0.06
UBR1-212ENST00000627960 CSF1RP07333 972 aa15.43■□□□□ 0.06
UBR1-212ENST00000627960 RPS12P25398 132 aaKnown RBP15.43■□□□□ 0.06
UBR1-212ENST00000627960 DCAF8Q5TAQ9 597 aa15.43■□□□□ 0.06
UBR1-212ENST00000627960 TRPM4Q8TD43 1214 aa15.43■□□□□ 0.06
UBR1-212ENST00000627960 F6X3S4 739 aa15.42■□□□□ 0.06
UBR1-212ENST00000627960 VIL1P09327 827 aaKnown RBP15.42■□□□□ 0.06
UBR1-212ENST00000627960 BEND3Q5T5X7 828 aa15.42■□□□□ 0.06
UBR1-212ENST00000627960 CST9Q5W186 159 aa15.42■□□□□ 0.06
UBR1-212ENST00000627960 ABT1Q9ULW3 272 aaKnown RBP15.42■□□□□ 0.06
UBR1-212ENST00000627960 IGHMBP2P38935 993 aaKnown RBP15.41■□□□□ 0.06
UBR1-212ENST00000627960 COL13A1Q5TAT6 717 aaPredicted RBP15.41■□□□□ 0.06
UBR1-212ENST00000627960 SAMD7Q7Z3H4 446 aa15.41■□□□□ 0.06
UBR1-212ENST00000627960 GLIS2Q9BZE0 524 aaPredicted RBP15.41■□□□□ 0.06
UBR1-212ENST00000627960 WTIPA6NIX2 430 aaPredicted RBP15.4■□□□□ 0.06
UBR1-212ENST00000627960 ITGA6P23229 1130 aa15.4■□□□□ 0.06
UBR1-212ENST00000627960 CCT4P50991 539 aaKnown RBP15.4■□□□□ 0.06
UBR1-212ENST00000627960 FAM161AQ3B820 660 aa15.4■□□□□ 0.06
UBR1-212ENST00000627960 CDC37L1Q7L3B6 337 aa15.4■□□□□ 0.06
UBR1-212ENST00000627960 MED23Q9ULK4 1368 aa15.39■□□□□ 0.05
UBR1-212ENST00000627960 FOXO4P98177 505 aa15.39■□□□□ 0.05
UBR1-212ENST00000627960 TBC1D10BQ4KMP7 808 aaPredicted RBP15.39■□□□□ 0.05
UBR1-212ENST00000627960 PODNQ7Z5L7 613 aa15.39■□□□□ 0.05
UBR1-212ENST00000627960 TLL2Q9Y6L7 1015 aa15.39■□□□□ 0.05
UBR1-212ENST00000627960 WDR33Q9C0J8 1336 aaKnown RBP15.39■□□□□ 0.05
UBR1-212ENST00000627960 ZNF609O15014 1411 aa15.38■□□□□ 0.05
UBR1-212ENST00000627960 ANKRD18BA2A2Z9 1011 aa15.38■□□□□ 0.05
UBR1-212ENST00000627960 CELF2O95319 508 aaKnown RBP15.38■□□□□ 0.05
UBR1-212ENST00000627960 EGFRP00533 1210 aa15.38■□□□□ 0.05
UBR1-212ENST00000627960 RBM26Q5T8P6 1007 aaKnown RBP15.38■□□□□ 0.05
UBR1-212ENST00000627960 RSBN1LQ6PCB5 846 aaPredicted RBP15.38■□□□□ 0.05
UBR1-212ENST00000627960 USP48Q86UV5 1035 aa15.38■□□□□ 0.05
UBR1-212ENST00000627960 AGBL3Q8NEM8 1001 aa15.38■□□□□ 0.05
UBR1-212ENST00000627960 MPHOSPH8Q99549 860 aa15.38■□□□□ 0.05
UBR1-212ENST00000627960 ANKRD2Q9GZV1 360 aa15.38■□□□□ 0.05
UBR1-212ENST00000627960 LEMD3Q9Y2U8 911 aa15.38■□□□□ 0.05
UBR1-212ENST00000627960 USP17L3A6NCW0 530 aa15.37■□□□□ 0.05
UBR1-212ENST00000627960 USP17L4A6NCW7 530 aa15.37■□□□□ 0.05
UBR1-212ENST00000627960 E9PSI1 815 aa15.37■□□□□ 0.05
UBR1-212ENST00000627960 ALDH1L1O75891 902 aa15.37■□□□□ 0.05
UBR1-212ENST00000627960 USP17L1Q7RTZ2 530 aa15.37■□□□□ 0.05
UBR1-212ENST00000627960 ZNF646O15015 1829 aaPredicted RBP15.36■□□□□ 0.05
UBR1-212ENST00000627960 GRM8O00222 908 aa15.36■□□□□ 0.05
UBR1-212ENST00000627960 ZNF280AP59817 542 aaPredicted RBP15.36■□□□□ 0.05
UBR1-212ENST00000627960 SLFN5Q08AF3 891 aa15.36■□□□□ 0.05
UBR1-212ENST00000627960 IFIT5Q13325 482 aaKnown RBP15.36■□□□□ 0.05
UBR1-212ENST00000627960 KIF4BQ2VIQ3 1234 aa15.36■□□□□ 0.05
UBR1-212ENST00000627960 TXNRD3Q86VQ6 643 aa15.36■□□□□ 0.05
UBR1-212ENST00000627960 GMLQ99445 158 aa15.36■□□□□ 0.05
UBR1-212ENST00000627960 SRCIN1Q9C0H9 1055 aa15.36■□□□□ 0.05
UBR1-212ENST00000627960 WBP1LQ9NX94 342 aa15.36■□□□□ 0.05
UBR1-212ENST00000627960 C9orf78Q9NZ63 289 aaPredicted RBP15.36■□□□□ 0.05
UBR1-212ENST00000627960 ZNF804BA4D1E1 1349 aa15.36■□□□□ 0.05
UBR1-212ENST00000627960 A0A1B0GUL6 1792 aa15.35■□□□□ 0.05
UBR1-212ENST00000627960 FOXN1O15353 648 aa15.35■□□□□ 0.05
UBR1-212ENST00000627960 ECE1P42892 770 aa15.35■□□□□ 0.05
UBR1-212ENST00000627960 CHRNDQ07001 517 aa15.35■□□□□ 0.05
UBR1-212ENST00000627960 EPHA10Q5JZY3 1008 aa15.35■□□□□ 0.05
UBR1-212ENST00000627960 CYP4F22Q6NT55 531 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms