RNA–Protein interactions for RNA: ENST00000627622.1

CHD2-212, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 2 BASIC

Gene CHD2, Length 1,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-212ENST00000627622 GPSM2P81274 684 aa11.32□□□□□ -0.6
CHD2-212ENST00000627622 NEUROD2Q15784 382 aa11.32□□□□□ -0.6
CHD2-212ENST00000627622 C2orf69Q8N8R5 385 aa11.32□□□□□ -0.6
CHD2-212ENST00000627622 DCPSQ96C86 337 aaKnown RBP11.32□□□□□ -0.6
CHD2-212ENST00000627622 EYA3Q99504 573 aa11.32□□□□□ -0.6
CHD2-212ENST00000627622 GBA2Q9HCG7 927 aaPredicted RBP11.32□□□□□ -0.6
CHD2-212ENST00000627622 LAS1LQ9Y4W2 734 aaKnown RBP11.32□□□□□ -0.6
CHD2-212ENST00000627622 COL4A1P02462 1669 aa11.31□□□□□ -0.6
CHD2-212ENST00000627622 FAM155AB1AL88 458 aaPredicted RBP11.31□□□□□ -0.6
CHD2-212ENST00000627622 ATP5J2-PTCD1G3V325 749 aa11.31□□□□□ -0.6
CHD2-212ENST00000627622 HOXB7P09629 217 aa11.31□□□□□ -0.6
CHD2-212ENST00000627622 RALBP1Q15311 655 aa11.31□□□□□ -0.6
CHD2-212ENST00000627622 HDGFL1Q5TGJ6 251 aa11.31□□□□□ -0.6
CHD2-212ENST00000627622 CCDC102AQ96A19 550 aa11.31□□□□□ -0.6
CHD2-212ENST00000627622 SPINK5Q9NQ38 1064 aaPredicted RBP11.31□□□□□ -0.6
CHD2-212ENST00000627622 KCNQ5Q9NR82 932 aa11.31□□□□□ -0.6
CHD2-212ENST00000627622 DBF4Q9UBU7 674 aaPredicted RBP11.31□□□□□ -0.6
CHD2-212ENST00000627622 RTL9Q8NET4 1388 aa11.3□□□□□ -0.6
CHD2-212ENST00000627622 DOK7Q18PE1 504 aa11.3□□□□□ -0.6
CHD2-212ENST00000627622 RBM26Q5T8P6 1007 aaKnown RBP11.3□□□□□ -0.6
CHD2-212ENST00000627622 TBC1D16Q8TBP0 767 aa11.3□□□□□ -0.6
CHD2-212ENST00000627622 SAGE1Q9NXZ1 904 aa11.3□□□□□ -0.6
CHD2-212ENST00000627622 ADM5C9JUS6 153 aa11.29□□□□□ -0.6
CHD2-212ENST00000627622 IRS4O14654 1257 aaPredicted RBP11.29□□□□□ -0.6
CHD2-212ENST00000627622 ZNF157P51786 506 aaPredicted RBP11.29□□□□□ -0.6
CHD2-212ENST00000627622 RPS8P62241 208 aaKnown RBP11.29□□□□□ -0.6
CHD2-212ENST00000627622 TRIM28Q13263 835 aaKnown RBP11.29□□□□□ -0.6
CHD2-212ENST00000627622 RTL5Q5HYW3 569 aaPredicted RBP11.29□□□□□ -0.6
CHD2-212ENST00000627622 CCDC146Q8IYE0 955 aa11.29□□□□□ -0.6
CHD2-212ENST00000627622 HYPKQ9NX55 129 aa11.29□□□□□ -0.6
CHD2-212ENST00000627622 TRIM35Q9UPQ4 493 aa11.29□□□□□ -0.6
CHD2-212ENST00000627622 PDE4DIPQ5VU43 2346 aa11.29□□□□□ -0.6
CHD2-212ENST00000627622 VIL1P09327 827 aaKnown RBP11.29□□□□□ -0.6
CHD2-212ENST00000627622 KIF23Q02241 960 aaPredicted RBP11.29□□□□□ -0.6
CHD2-212ENST00000627622 KIF4BQ2VIQ3 1234 aa11.29□□□□□ -0.6
CHD2-212ENST00000627622 ZC3H12CQ9C0D7 883 aaKnown RBP11.29□□□□□ -0.6
CHD2-212ENST00000627622 PODXL2Q9NZ53 605 aa11.29□□□□□ -0.6
CHD2-212ENST00000627622 LHX8Q68G74 356 aa11.28□□□□□ -0.6
CHD2-212ENST00000627622 SULF1Q8IWU6 871 aa11.28□□□□□ -0.6
CHD2-212ENST00000627622 RUNDC1Q96C34 613 aa11.28□□□□□ -0.6
CHD2-212ENST00000627622 G3V3G9 751 aa11.27□□□□□ -0.61
CHD2-212ENST00000627622 TRPA1O75762 1119 aa11.27□□□□□ -0.61
CHD2-212ENST00000627622 DCAF8Q5TAQ9 597 aa11.27□□□□□ -0.61
CHD2-212ENST00000627622 DUSP27Q5VZP5 1158 aa11.27□□□□□ -0.61
CHD2-212ENST00000627622 ZBTB38Q8NAP3 1195 aaPredicted RBP11.27□□□□□ -0.61
CHD2-212ENST00000627622 RNF186Q9NXI6 227 aa11.27□□□□□ -0.61
CHD2-212ENST00000627622 GGA3Q9NZ52 723 aa11.27□□□□□ -0.61
CHD2-212ENST00000627622 ANKIB1Q9P2G1 1089 aa11.27□□□□□ -0.61
CHD2-212ENST00000627622 MYH3P11055 1940 aa11.26□□□□□ -0.61
CHD2-212ENST00000627622 SLC10A3P09131 477 aa11.26□□□□□ -0.61
CHD2-212ENST00000627622 HSP90B1P14625 803 aaKnown RBP11.26□□□□□ -0.61
CHD2-212ENST00000627622 RIC3Q7Z5B4 369 aa11.26□□□□□ -0.61
CHD2-212ENST00000627622 CSRNP1Q96S65 589 aa11.26□□□□□ -0.61
CHD2-212ENST00000627622 SEC31BQ9NQW1 1179 aa11.26□□□□□ -0.61
CHD2-212ENST00000627622 GGA1Q9UJY5 639 aa11.26□□□□□ -0.61
CHD2-212ENST00000627622 UFL1O94874 794 aa11.26□□□□□ -0.61
CHD2-212ENST00000627622 ZNF280AP59817 542 aaPredicted RBP11.26□□□□□ -0.61
CHD2-212ENST00000627622 REM2Q8IYK8 340 aaPredicted RBP11.26□□□□□ -0.61
CHD2-212ENST00000627622 AGBL3Q8NEM8 1001 aa11.26□□□□□ -0.61
CHD2-212ENST00000627622 CDCA5Q96FF9 252 aa11.26□□□□□ -0.61
CHD2-212ENST00000627622 ZNF609O15014 1411 aa11.26□□□□□ -0.61
CHD2-212ENST00000627622 ASTN2O75129 1339 aaPredicted RBP11.25□□□□□ -0.61
CHD2-212ENST00000627622 MYBBP1AQ9BQG0 1328 aaKnown RBP11.25□□□□□ -0.61
CHD2-212ENST00000627622 PAPPA2Q9BXP8 1791 aa11.25□□□□□ -0.61
CHD2-212ENST00000627622 GOLGA2Q08379 1002 aa11.25□□□□□ -0.61
CHD2-212ENST00000627622 SCARF1Q14162 830 aa11.25□□□□□ -0.61
CHD2-212ENST00000627622 CCDC152Q4G0S7 254 aa11.25□□□□□ -0.61
CHD2-212ENST00000627622 ANGEL2Q5VTE6 544 aaKnown RBP11.25□□□□□ -0.61
CHD2-212ENST00000627622 RSBN1LQ6PCB5 846 aaPredicted RBP11.25□□□□□ -0.61
CHD2-212ENST00000627622 SPEF2Q9C093 1822 aa11.25□□□□□ -0.61
CHD2-212ENST00000627622 PDE8AO60658 829 aa11.24□□□□□ -0.61
CHD2-212ENST00000627622 WDR43Q15061 677 aaKnown RBP eCLIP11.24□□□□□ -0.61
CHD2-212ENST00000627622 CCDC191Q8NCU4 936 aa11.24□□□□□ -0.61
CHD2-212ENST00000627622 PHAXQ9H814 394 aaKnown RBP11.24□□□□□ -0.61
CHD2-212ENST00000627622 MBIPQ9NS73 344 aa11.24□□□□□ -0.61
CHD2-212ENST00000627622 ADAMTS8Q9UP79 889 aa11.24□□□□□ -0.61
CHD2-212ENST00000627622 HAX1O00165 279 aa11.23□□□□□ -0.61
CHD2-212ENST00000627622 PCCAP05165 728 aaPredicted RBP11.23□□□□□ -0.61
CHD2-212ENST00000627622 FKBP1BP68106 108 aa11.23□□□□□ -0.61
CHD2-212ENST00000627622 RASAL3Q86YV0 1011 aa11.23□□□□□ -0.61
CHD2-212ENST00000627622 GMLQ99445 158 aa11.23□□□□□ -0.61
CHD2-212ENST00000627622 MYD88Q99836 296 aa11.23□□□□□ -0.61
CHD2-212ENST00000627622 MYOZ2Q9NPC6 264 aa11.23□□□□□ -0.61
CHD2-212ENST00000627622 XDHP47989 1333 aa11.23□□□□□ -0.61
CHD2-212ENST00000627622 PITPNM2Q9BZ72 1349 aa11.23□□□□□ -0.61
CHD2-212ENST00000627622 USP17L8P0C7I0 530 aa11.23□□□□□ -0.61
CHD2-212ENST00000627622 ZNF853P0CG23 659 aa11.23□□□□□ -0.61
CHD2-212ENST00000627622 PODNQ7Z5L7 613 aa11.23□□□□□ -0.61
CHD2-212ENST00000627622 CTU1Q7Z7A3 348 aaKnown RBP11.23□□□□□ -0.61
CHD2-212ENST00000627622 PCDH10Q9P2E7 1040 aa11.23□□□□□ -0.61
CHD2-212ENST00000627622 ZNF646O15015 1829 aaPredicted RBP11.23□□□□□ -0.61
CHD2-212ENST00000627622 USP17L3A6NCW0 530 aa11.22□□□□□ -0.61
CHD2-212ENST00000627622 USP17L4A6NCW7 530 aa11.22□□□□□ -0.61
CHD2-212ENST00000627622 ATP2B4P23634 1241 aa11.22□□□□□ -0.61
CHD2-212ENST00000627622 SOX10P56693 466 aa11.22□□□□□ -0.61
CHD2-212ENST00000627622 USP17L1Q7RTZ2 530 aa11.22□□□□□ -0.61
CHD2-212ENST00000627622 ANKRD18AQ8IVF6 992 aa11.22□□□□□ -0.61
CHD2-212ENST00000627622 CCDC85AQ96PX6 553 aaPredicted RBP11.22□□□□□ -0.61
CHD2-212ENST00000627622 CWC25Q9NXE8 425 aaPredicted RBP11.22□□□□□ -0.61
CHD2-212ENST00000627622 JARID2Q92833 1246 aaPredicted RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms