RNA–Protein interactions for RNA: ENST00000627568.2

TCF4-259, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 806 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-259ENST00000627568 TRPM7Q96QT4 1865 aa32.79■■■□□ 2.84
TCF4-259ENST00000627568 G3V3G9 751 aa32.77■■■□□ 2.84
TCF4-259ENST00000627568 H7C1D1 291 aa32.77■■■□□ 2.84
TCF4-259ENST00000627568 PSMD14O00487 310 aa32.77■■■□□ 2.84
TCF4-259ENST00000627568 EXOSC9Q06265 439 aaKnown RBP32.77■■■□□ 2.84
TCF4-259ENST00000627568 DCAF8Q5TAQ9 597 aa32.77■■■□□ 2.84
TCF4-259ENST00000627568 GPR101Q96P66 508 aaPredicted RBP32.77■■■□□ 2.84
TCF4-259ENST00000627568 CNOT7Q9UIV1 285 aaKnown RBP32.77■■■□□ 2.84
TCF4-259ENST00000627568 DOK7Q18PE1 504 aa32.76■■■□□ 2.83
TCF4-259ENST00000627568 MICALL2Q8IY33 904 aa32.76■■■□□ 2.83
TCF4-259ENST00000627568 MYH16Q9H6N6 1097 aa32.76■■■□□ 2.83
TCF4-259ENST00000627568 VAMP4O75379 141 aa32.75■■■□□ 2.83
TCF4-259ENST00000627568 VEGFBP49765 207 aa32.75■■■□□ 2.83
TCF4-259ENST00000627568 UBE3BQ7Z3V4 1068 aa32.75■■■□□ 2.83
TCF4-259ENST00000627568 DNAAF4Q8WXU2 420 aa32.75■■■□□ 2.83
TCF4-259ENST00000627568 XDHP47989 1333 aa32.75■■■□□ 2.83
TCF4-259ENST00000627568 RASSF10A6NK89 507 aa32.74■■■□□ 2.83
TCF4-259ENST00000627568 DEFB115Q30KQ5 88 aa32.74■■■□□ 2.83
TCF4-259ENST00000627568 TTLL11Q8NHH1 800 aa32.74■■■□□ 2.83
TCF4-259ENST00000627568 DPF2Q92785 391 aa32.74■■■□□ 2.83
TCF4-259ENST00000627568 ZBTB12Q9Y330 459 aaPredicted RBP32.74■■■□□ 2.83
TCF4-259ENST00000627568 SPEF2Q9C093 1822 aa32.73■■■□□ 2.83
TCF4-259ENST00000627568 TRAF5O00463 557 aa32.73■■■□□ 2.83
TCF4-259ENST00000627568 ZC3H15Q8WU90 426 aaKnown RBP32.73■■■□□ 2.83
TCF4-259ENST00000627568 RPS12P25398 132 aaKnown RBP32.72■■■□□ 2.83
TCF4-259ENST00000627568 GCKRQ14397 625 aa32.72■■■□□ 2.83
TCF4-259ENST00000627568 COL13A1Q5TAT6 717 aaPredicted RBP32.72■■■□□ 2.83
TCF4-259ENST00000627568 TRPM4Q8TD43 1214 aa32.72■■■□□ 2.83
TCF4-259ENST00000627568 RTL9Q8NET4 1388 aa32.71■■■□□ 2.83
TCF4-259ENST00000627568 H7C1W4 665 aa32.71■■■□□ 2.83
TCF4-259ENST00000627568 FMR1Q06787 632 aaKnown RBP eCLIP32.71■■■□□ 2.83
TCF4-259ENST00000627568 LINS1Q8NG48 757 aa32.71■■■□□ 2.83
TCF4-259ENST00000627568 GREM2Q9H772 168 aa32.71■■■□□ 2.83
TCF4-259ENST00000627568 ATP2B4P23634 1241 aa32.7■■■□□ 2.83
TCF4-259ENST00000627568 SCN9AQ15858 1988 aa32.7■■■□□ 2.82
TCF4-259ENST00000627568 SHTN1A0MZ66 631 aa32.69■■■□□ 2.82
TCF4-259ENST00000627568 BSDC1Q9NW68 430 aaPredicted RBP32.69■■■□□ 2.82
TCF4-259ENST00000627568 PGAP2Q9UHJ9 254 aa32.69■■■□□ 2.82
TCF4-259ENST00000627568 HIRAP54198 1017 aaPredicted RBP32.68■■■□□ 2.82
TCF4-259ENST00000627568 GLIS2Q9BZE0 524 aaPredicted RBP32.68■■■□□ 2.82
TCF4-259ENST00000627568 SPINK5Q9NQ38 1064 aaPredicted RBP32.68■■■□□ 2.82
TCF4-259ENST00000627568 KCNQ5Q9NR82 932 aa32.68■■■□□ 2.82
TCF4-259ENST00000627568 PAXIP1Q6ZW49 1069 aaPredicted RBP32.67■■■□□ 2.82
TCF4-259ENST00000627568 AIDAQ96BJ3 306 aa32.67■■■□□ 2.82
TCF4-259ENST00000627568 PLA2G12BQ9BX93 195 aa32.67■■■□□ 2.82
TCF4-259ENST00000627568 IGHMBP2P38935 993 aaKnown RBP32.66■■■□□ 2.82
TCF4-259ENST00000627568 CDC37L1Q7L3B6 337 aa32.66■■■□□ 2.82
TCF4-259ENST00000627568 CST9Q5W186 159 aa32.65■■■□□ 2.82
TCF4-259ENST00000627568 SAMD7Q7Z3H4 446 aa32.65■■■□□ 2.82
TCF4-259ENST00000627568 WDR33Q9C0J8 1336 aaKnown RBP32.65■■■□□ 2.82
TCF4-259ENST00000627568 CELF2O95319 508 aaKnown RBP32.64■■■□□ 2.82
TCF4-259ENST00000627568 VIL1P09327 827 aaKnown RBP32.64■■■□□ 2.82
TCF4-259ENST00000627568 PSME4Q14997 1843 aa32.64■■■□□ 2.82
TCF4-259ENST00000627568 TBC1D10BQ4KMP7 808 aaPredicted RBP32.64■■■□□ 2.82
TCF4-259ENST00000627568 MINPP1Q9UNW1 487 aa32.64■■■□□ 2.82
TCF4-259ENST00000627568 ECE1P42892 770 aa32.63■■■□□ 2.81
TCF4-259ENST00000627568 TLL2Q9Y6L7 1015 aa32.63■■■□□ 2.81
TCF4-259ENST00000627568 ITGA6P23229 1130 aa32.62■■■□□ 2.81
TCF4-259ENST00000627568 TNS4Q8IZW8 715 aa32.62■■■□□ 2.81
TCF4-259ENST00000627568 ZNF408Q9H9D4 720 aa32.62■■■□□ 2.81
TCF4-259ENST00000627568 MED23Q9ULK4 1368 aa32.61■■■□□ 2.81
TCF4-259ENST00000627568 CASP7P55210 303 aa32.61■■■□□ 2.81
TCF4-259ENST00000627568 FAM161AQ3B820 660 aa32.61■■■□□ 2.81
TCF4-259ENST00000627568 F6X3S4 739 aa32.6■■■□□ 2.81
TCF4-259ENST00000627568 FOXN1O15353 648 aa32.6■■■□□ 2.81
TCF4-259ENST00000627568 RBM26Q5T8P6 1007 aaKnown RBP32.6■■■□□ 2.81
TCF4-259ENST00000627568 CAPNS2Q96L46 248 aa32.6■■■□□ 2.81
TCF4-259ENST00000627568 MPHOSPH8Q99549 860 aa32.6■■■□□ 2.81
TCF4-259ENST00000627568 CCT4P50991 539 aaKnown RBP32.59■■■□□ 2.81
TCF4-259ENST00000627568 GRM1Q13255 1194 aa32.59■■■□□ 2.81
TCF4-259ENST00000627568 KIF4BQ2VIQ3 1234 aa32.59■■■□□ 2.81
TCF4-259ENST00000627568 RSBN1LQ6PCB5 846 aaPredicted RBP32.59■■■□□ 2.81
TCF4-259ENST00000627568 PODNQ7Z5L7 613 aa32.59■■■□□ 2.81
TCF4-259ENST00000627568 AGBL3Q8NEM8 1001 aa32.59■■■□□ 2.81
TCF4-259ENST00000627568 ZNF609O15014 1411 aa32.59■■■□□ 2.81
TCF4-259ENST00000627568 CSF1RP07333 972 aa32.58■■■□□ 2.81
TCF4-259ENST00000627568 MAP2K1Q02750 393 aaPredicted RBP32.58■■■□□ 2.81
TCF4-259ENST00000627568 WBP1LQ9NX94 342 aa32.58■■■□□ 2.81
TCF4-259ENST00000627568 POLR2AP24928 1970 aaKnown RBP32.58■■■□□ 2.81
TCF4-259ENST00000627568 EGFRP00533 1210 aa32.57■■■□□ 2.8
TCF4-259ENST00000627568 BEND3Q5T5X7 828 aa32.57■■■□□ 2.8
TCF4-259ENST00000627568 CYP4F22Q6NT55 531 aa32.57■■■□□ 2.8
TCF4-259ENST00000627568 KRT26Q7Z3Y9 468 aa32.57■■■□□ 2.8
TCF4-259ENST00000627568 USP48Q86UV5 1035 aa32.57■■■□□ 2.8
TCF4-259ENST00000627568 DCPSQ96C86 337 aaKnown RBP32.57■■■□□ 2.8
TCF4-259ENST00000627568 ANKRD2Q9GZV1 360 aa32.57■■■□□ 2.8
TCF4-259ENST00000627568 THSD7BQ9C0I4 1608 aa32.56■■■□□ 2.8
TCF4-259ENST00000627568 USP17L3A6NCW0 530 aa32.56■■■□□ 2.8
TCF4-259ENST00000627568 USP17L4A6NCW7 530 aa32.56■■■□□ 2.8
TCF4-259ENST00000627568 CTCFP49711 727 aaPredicted RBP32.56■■■□□ 2.8
TCF4-259ENST00000627568 USP17L1Q7RTZ2 530 aa32.56■■■□□ 2.8
TCF4-259ENST00000627568 SAPCD2Q86UD0 394 aa32.56■■■□□ 2.8
TCF4-259ENST00000627568 LEMD3Q9Y2U8 911 aa32.56■■■□□ 2.8
TCF4-259ENST00000627568 ZNF521Q96K83 1311 aa32.55■■■□□ 2.8
TCF4-259ENST00000627568 ANKRD18BA2A2Z9 1011 aa32.55■■■□□ 2.8
TCF4-259ENST00000627568 CHMP3Q9Y3E7 222 aa32.53■■■□□ 2.8
TCF4-259ENST00000627568 WTIPA6NIX2 430 aaPredicted RBP32.52■■■□□ 2.8
TCF4-259ENST00000627568 KCNJ4P48050 445 aa32.52■■■□□ 2.8
TCF4-259ENST00000627568 IFIT5Q13325 482 aaKnown RBP32.52■■■□□ 2.8
TCF4-259ENST00000627568 HHIPL1Q96JK4 782 aa32.52■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms