RNA–Protein interactions for RNA: ENST00000627200.1

CHD2-210, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 3

Gene CHD2, Length 230 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-210ENST00000627200 UFL1O94874 794 aa12.1□□□□□ -0.47
CHD2-210ENST00000627200 GRM1Q13255 1194 aa12.1□□□□□ -0.47
CHD2-210ENST00000627200 DEFB115Q30KQ5 88 aa12.1□□□□□ -0.47
CHD2-210ENST00000627200 CCDC152Q4G0S7 254 aa12.1□□□□□ -0.47
CHD2-210ENST00000627200 STK31Q9BXU1 1019 aa12.1□□□□□ -0.47
CHD2-210ENST00000627200 CNOT7Q9UIV1 285 aaKnown RBP12.1□□□□□ -0.47
CHD2-210ENST00000627200 WDR33Q9C0J8 1336 aaKnown RBP12.1□□□□□ -0.47
CHD2-210ENST00000627200 MYH3P11055 1940 aa12.09□□□□□ -0.47
CHD2-210ENST00000627200 WTIPA6NIX2 430 aaPredicted RBP12.09□□□□□ -0.47
CHD2-210ENST00000627200 NEURL1BA8MQ27 555 aa12.09□□□□□ -0.47
CHD2-210ENST00000627200 ANP32CO43423 234 aa12.09□□□□□ -0.47
CHD2-210ENST00000627200 SLC4A2P04920 1241 aa12.09□□□□□ -0.47
CHD2-210ENST00000627200 CTSWP56202 376 aa12.09□□□□□ -0.47
CHD2-210ENST00000627200 CYP4F22Q6NT55 531 aa12.09□□□□□ -0.47
CHD2-210ENST00000627200 PAXIP1Q6ZW49 1069 aaPredicted RBP12.09□□□□□ -0.47
CHD2-210ENST00000627200 SAMD7Q7Z3H4 446 aa12.09□□□□□ -0.47
CHD2-210ENST00000627200 ANKIB1Q9P2G1 1089 aa12.09□□□□□ -0.47
CHD2-210ENST00000627200 IL16Q14005 1332 aa12.09□□□□□ -0.47
CHD2-210ENST00000627200 CELF2O95319 508 aaKnown RBP12.08□□□□□ -0.48
CHD2-210ENST00000627200 ZEB1P37275 1124 aaPredicted RBP12.08□□□□□ -0.48
CHD2-210ENST00000627200 FLIIQ13045 1269 aa12.08□□□□□ -0.48
CHD2-210ENST00000627200 TBC1D10BQ4KMP7 808 aaPredicted RBP12.08□□□□□ -0.48
CHD2-210ENST00000627200 UBE3BQ7Z3V4 1068 aa12.08□□□□□ -0.48
CHD2-210ENST00000627200 EYA3Q99504 573 aa12.08□□□□□ -0.48
CHD2-210ENST00000627200 GREM2Q9H772 168 aa12.08□□□□□ -0.48
CHD2-210ENST00000627200 ZNF408Q9H9D4 720 aa12.08□□□□□ -0.48
CHD2-210ENST00000627200 SPINK5Q9NQ38 1064 aaPredicted RBP12.08□□□□□ -0.48
CHD2-210ENST00000627200 PODXL2Q9NZ53 605 aa12.08□□□□□ -0.48
CHD2-210ENST00000627200 ANKRD18AQ8IVF6 992 aa12.07□□□□□ -0.48
CHD2-210ENST00000627200 TTLL11Q8NHH1 800 aa12.07□□□□□ -0.48
CHD2-210ENST00000627200 AIDAQ96BJ3 306 aa12.07□□□□□ -0.48
CHD2-210ENST00000627200 CAPNS2Q96L46 248 aa12.07□□□□□ -0.48
CHD2-210ENST00000627200 ZC3H12CQ9C0D7 883 aaKnown RBP12.07□□□□□ -0.48
CHD2-210ENST00000627200 WBP1LQ9NX94 342 aa12.07□□□□□ -0.48
CHD2-210ENST00000627200 PGAP2Q9UHJ9 254 aa12.07□□□□□ -0.48
CHD2-210ENST00000627200 GGA1Q9UJY5 639 aa12.07□□□□□ -0.48
CHD2-210ENST00000627200 TLL2Q9Y6L7 1015 aa12.07□□□□□ -0.48
CHD2-210ENST00000627200 ASTN2O75129 1339 aaPredicted RBP12.07□□□□□ -0.48
CHD2-210ENST00000627200 PSME4Q14997 1843 aa12.07□□□□□ -0.48
CHD2-210ENST00000627200 H7C1D1 291 aa12.06□□□□□ -0.48
CHD2-210ENST00000627200 AOC2O75106 756 aa12.06□□□□□ -0.48
CHD2-210ENST00000627200 HSP90B1P14625 803 aaKnown RBP12.06□□□□□ -0.48
CHD2-210ENST00000627200 EXOSC9Q06265 439 aaKnown RBP12.06□□□□□ -0.48
CHD2-210ENST00000627200 NEXNQ0ZGT2 675 aa12.06□□□□□ -0.48
CHD2-210ENST00000627200 FKBP5Q13451 457 aaPredicted RBP12.06□□□□□ -0.48
CHD2-210ENST00000627200 RBM26Q5T8P6 1007 aaKnown RBP12.06□□□□□ -0.48
CHD2-210ENST00000627200 DPF2Q92785 391 aa12.06□□□□□ -0.48
CHD2-210ENST00000627200 ZNF646O15015 1829 aaPredicted RBP12.06□□□□□ -0.48
CHD2-210ENST00000627200 XDHP47989 1333 aa12.06□□□□□ -0.48
CHD2-210ENST00000627200 ADM5C9JUS6 153 aa12.05□□□□□ -0.48
CHD2-210ENST00000627200 H7C1W4 665 aa12.05□□□□□ -0.48
CHD2-210ENST00000627200 VAMP4O75379 141 aa12.05□□□□□ -0.48
CHD2-210ENST00000627200 CTCFP49711 727 aaPredicted RBP12.05□□□□□ -0.48
CHD2-210ENST00000627200 LBX1P52954 281 aa12.05□□□□□ -0.48
CHD2-210ENST00000627200 GCKRQ14397 625 aa12.05□□□□□ -0.48
CHD2-210ENST00000627200 FAM161AQ3B820 660 aa12.05□□□□□ -0.48
CHD2-210ENST00000627200 SAPCD2Q86UD0 394 aa12.05□□□□□ -0.48
CHD2-210ENST00000627200 USP48Q86UV5 1035 aa12.05□□□□□ -0.48
CHD2-210ENST00000627200 ZC3H15Q8WU90 426 aaKnown RBP12.05□□□□□ -0.48
CHD2-210ENST00000627200 CHMP4AQ9BY43 222 aa12.05□□□□□ -0.48
CHD2-210ENST00000627200 F6X3S4 739 aa12.04□□□□□ -0.48
CHD2-210ENST00000627200 G3V3G9 751 aa12.04□□□□□ -0.48
CHD2-210ENST00000627200 VIL1P09327 827 aaKnown RBP12.04□□□□□ -0.48
CHD2-210ENST00000627200 HSPA8P11142 646 aaKnown RBP12.04□□□□□ -0.48
CHD2-210ENST00000627200 RPS12P25398 132 aaKnown RBP12.04□□□□□ -0.48
CHD2-210ENST00000627200 KLRK1P26718 216 aa12.04□□□□□ -0.48
CHD2-210ENST00000627200 CASP7P55210 303 aa12.04□□□□□ -0.48
CHD2-210ENST00000627200 KIF4BQ2VIQ3 1234 aa12.04□□□□□ -0.48
CHD2-210ENST00000627200 DCAF8Q5TAQ9 597 aa12.04□□□□□ -0.48
CHD2-210ENST00000627200 CDC37L1Q7L3B6 337 aa12.04□□□□□ -0.48
CHD2-210ENST00000627200 FAM9BQ8IZU0 186 aa12.04□□□□□ -0.48
CHD2-210ENST00000627200 DNAAF4Q8WXU2 420 aa12.04□□□□□ -0.48
CHD2-210ENST00000627200 CDC5LQ99459 802 aaKnown RBP12.04□□□□□ -0.48
CHD2-210ENST00000627200 NCBP3Q53F19 620 aaKnown RBP12.03□□□□□ -0.48
CHD2-210ENST00000627200 KRT26Q7Z3Y9 468 aa12.03□□□□□ -0.48
CHD2-210ENST00000627200 WDR63Q8IWG1 891 aa12.03□□□□□ -0.48
CHD2-210ENST00000627200 MXD3Q9BW11 206 aa12.03□□□□□ -0.48
CHD2-210ENST00000627200 GGA3Q9NZ52 723 aa12.03□□□□□ -0.48
CHD2-210ENST00000627200 TSKSQ9UJT2 592 aa12.03□□□□□ -0.48
CHD2-210ENST00000627200 MINPP1Q9UNW1 487 aa12.03□□□□□ -0.48
CHD2-210ENST00000627200 POLR2AP24928 1970 aaKnown RBP12.03□□□□□ -0.48
CHD2-210ENST00000627200 MED23Q9ULK4 1368 aa12.03□□□□□ -0.48
CHD2-210ENST00000627200 ZNF609O15014 1411 aa12.03□□□□□ -0.48
CHD2-210ENST00000627200 A0A1B0GUL6 1792 aa12.02□□□□□ -0.48
CHD2-210ENST00000627200 ITGA6P23229 1130 aa12.02□□□□□ -0.49
CHD2-210ENST00000627200 ATP2B4P23634 1241 aa12.02□□□□□ -0.49
CHD2-210ENST00000627200 ECE1P42892 770 aa12.02□□□□□ -0.49
CHD2-210ENST00000627200 MAP2K1Q02750 393 aaPredicted RBP12.02□□□□□ -0.49
CHD2-210ENST00000627200 RSBN1LQ6PCB5 846 aaPredicted RBP12.02□□□□□ -0.49
CHD2-210ENST00000627200 TXNRD3Q86VQ6 643 aa12.02□□□□□ -0.49
CHD2-210ENST00000627200 PRDM10Q9NQV6 1147 aa12.02□□□□□ -0.49
CHD2-210ENST00000627200 BSDC1Q9NW68 430 aaPredicted RBP12.02□□□□□ -0.49
CHD2-210ENST00000627200 SCAF8Q9UPN6 1271 aaKnown RBP12.02□□□□□ -0.49
CHD2-210ENST00000627200 CACNA1FO60840 1977 aa12.01□□□□□ -0.49
CHD2-210ENST00000627200 CCT4P50991 539 aaKnown RBP12.01□□□□□ -0.49
CHD2-210ENST00000627200 LINS1Q8NG48 757 aa12.01□□□□□ -0.49
CHD2-210ENST00000627200 ZIC5Q96T25 663 aa12.01□□□□□ -0.49
CHD2-210ENST00000627200 GMLQ99445 158 aa12.01□□□□□ -0.49
CHD2-210ENST00000627200 PLA2G12BQ9BX93 195 aa12.01□□□□□ -0.49
CHD2-210ENST00000627200 USP17L3A6NCW0 530 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms