RNA–Protein interactions for RNA: ENST00000626926.1

CPSF7-226, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5 BASIC

Gene CPSF7, Length 306 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-226ENST00000626926 TRPM4Q8TD43 1214 aa11.3□□□□□ -0.6
CPSF7-226ENST00000626926 HHIPL1Q96JK4 782 aa11.3□□□□□ -0.6
CPSF7-226ENST00000626926 WBP1LQ9NX94 342 aa11.3□□□□□ -0.6
CPSF7-226ENST00000626926 CNOT7Q9UIV1 285 aaKnown RBP11.3□□□□□ -0.6
CPSF7-226ENST00000626926 TLL2Q9Y6L7 1015 aa11.3□□□□□ -0.6
CPSF7-226ENST00000626926 XDHP47989 1333 aa11.3□□□□□ -0.6
CPSF7-226ENST00000626926 C6orf229H3BNL8 230 aa11.29□□□□□ -0.6
CPSF7-226ENST00000626926 H7C1W4 665 aa11.29□□□□□ -0.6
CPSF7-226ENST00000626926 TRAF5O00463 557 aa11.29□□□□□ -0.6
CPSF7-226ENST00000626926 ANP32CO43423 234 aa11.29□□□□□ -0.6
CPSF7-226ENST00000626926 CASP7P55210 303 aa11.29□□□□□ -0.6
CPSF7-226ENST00000626926 FMR1Q06787 632 aaKnown RBP eCLIP11.29□□□□□ -0.6
CPSF7-226ENST00000626926 NEXNQ0ZGT2 675 aa11.29□□□□□ -0.6
CPSF7-226ENST00000626926 FLIIQ13045 1269 aa11.29□□□□□ -0.6
CPSF7-226ENST00000626926 G2E3Q7L622 706 aa11.29□□□□□ -0.6
CPSF7-226ENST00000626926 MICALL2Q8IY33 904 aa11.29□□□□□ -0.6
CPSF7-226ENST00000626926 TTLL11Q8NHH1 800 aa11.29□□□□□ -0.6
CPSF7-226ENST00000626926 BCL2L13Q9BXK5 485 aa11.29□□□□□ -0.6
CPSF7-226ENST00000626926 DBNDD1Q9H9R9 158 aa11.29□□□□□ -0.6
CPSF7-226ENST00000626926 PRDM10Q9NQV6 1147 aa11.29□□□□□ -0.6
CPSF7-226ENST00000626926 GGA1Q9UJY5 639 aa11.29□□□□□ -0.6
CPSF7-226ENST00000626926 WDR33Q9C0J8 1336 aaKnown RBP11.29□□□□□ -0.6
CPSF7-226ENST00000626926 MED23Q9ULK4 1368 aa11.28□□□□□ -0.6
CPSF7-226ENST00000626926 SHTN1A0MZ66 631 aa11.28□□□□□ -0.6
CPSF7-226ENST00000626926 H7C1D1 291 aa11.28□□□□□ -0.6
CPSF7-226ENST00000626926 FOXN1O15353 648 aa11.28□□□□□ -0.6
CPSF7-226ENST00000626926 VAMP4O75379 141 aa11.28□□□□□ -0.6
CPSF7-226ENST00000626926 UFL1O94874 794 aa11.28□□□□□ -0.6
CPSF7-226ENST00000626926 SLC4A2P04920 1241 aa11.28□□□□□ -0.6
CPSF7-226ENST00000626926 VIL1P09327 827 aaKnown RBP11.28□□□□□ -0.6
CPSF7-226ENST00000626926 CWF19L2Q2TBE0 894 aaKnown RBP11.28□□□□□ -0.6
CPSF7-226ENST00000626926 SAPCD2Q86UD0 394 aa11.28□□□□□ -0.6
CPSF7-226ENST00000626926 ANKRD18AQ8IVF6 992 aa11.28□□□□□ -0.6
CPSF7-226ENST00000626926 TNS4Q8IZW8 715 aa11.28□□□□□ -0.6
CPSF7-226ENST00000626926 CDC5LQ99459 802 aaKnown RBP11.28□□□□□ -0.6
CPSF7-226ENST00000626926 BSDC1Q9NW68 430 aaPredicted RBP11.28□□□□□ -0.6
CPSF7-226ENST00000626926 RIMBP2O15034 1052 aa11.27□□□□□ -0.61
CPSF7-226ENST00000626926 ECE1P42892 770 aa11.27□□□□□ -0.61
CPSF7-226ENST00000626926 CTCFP49711 727 aaPredicted RBP11.27□□□□□ -0.61
CPSF7-226ENST00000626926 ZNF280AP59817 542 aaPredicted RBP11.27□□□□□ -0.61
CPSF7-226ENST00000626926 MAP2K1Q02750 393 aaPredicted RBP11.27□□□□□ -0.61
CPSF7-226ENST00000626926 GCKRQ14397 625 aa11.27□□□□□ -0.61
CPSF7-226ENST00000626926 CDC37L1Q7L3B6 337 aa11.27□□□□□ -0.61
CPSF7-226ENST00000626926 LINS1Q8NG48 757 aa11.27□□□□□ -0.61
CPSF7-226ENST00000626926 CAPNS2Q96L46 248 aa11.27□□□□□ -0.61
CPSF7-226ENST00000626926 GPR101Q96P66 508 aaPredicted RBP11.27□□□□□ -0.61
CPSF7-226ENST00000626926 GMLQ99445 158 aa11.27□□□□□ -0.61
CPSF7-226ENST00000626926 GLIS2Q9BZE0 524 aaPredicted RBP11.27□□□□□ -0.61
CPSF7-226ENST00000626926 ZC3H12CQ9C0D7 883 aaKnown RBP11.27□□□□□ -0.61
CPSF7-226ENST00000626926 GREM2Q9H772 168 aa11.27□□□□□ -0.61
CPSF7-226ENST00000626926 KCNQ5Q9NR82 932 aa11.27□□□□□ -0.61
CPSF7-226ENST00000626926 ANKIB1Q9P2G1 1089 aa11.27□□□□□ -0.61
CPSF7-226ENST00000626926 ABT1Q9ULW3 272 aaKnown RBP11.27□□□□□ -0.61
CPSF7-226ENST00000626926 ZBTB12Q9Y330 459 aaPredicted RBP11.27□□□□□ -0.61
CPSF7-226ENST00000626926 ZNF521Q96K83 1311 aa11.27□□□□□ -0.61
CPSF7-226ENST00000626926 EGFRP00533 1210 aa11.26□□□□□ -0.61
CPSF7-226ENST00000626926 CSF1RP07333 972 aa11.26□□□□□ -0.61
CPSF7-226ENST00000626926 ATP2B4P23634 1241 aa11.26□□□□□ -0.61
CPSF7-226ENST00000626926 UBE3BQ7Z3V4 1068 aa11.26□□□□□ -0.61
CPSF7-226ENST00000626926 PODNQ7Z5L7 613 aa11.26□□□□□ -0.61
CPSF7-226ENST00000626926 AGBL3Q8NEM8 1001 aa11.26□□□□□ -0.61
CPSF7-226ENST00000626926 DNAAF4Q8WXU2 420 aa11.26□□□□□ -0.61
CPSF7-226ENST00000626926 JARID2Q92833 1246 aaPredicted RBP11.26□□□□□ -0.61
CPSF7-226ENST00000626926 CELF2O95319 508 aaKnown RBP11.25□□□□□ -0.61
CPSF7-226ENST00000626926 MAP2K2P36507 400 aa11.25□□□□□ -0.61
CPSF7-226ENST00000626926 EXOSC9Q06265 439 aaKnown RBP11.25□□□□□ -0.61
CPSF7-226ENST00000626926 FKBP5Q13451 457 aaPredicted RBP11.25□□□□□ -0.61
CPSF7-226ENST00000626926 DOK7Q18PE1 504 aa11.25□□□□□ -0.61
CPSF7-226ENST00000626926 RSBN1LQ6PCB5 846 aaPredicted RBP11.25□□□□□ -0.61
CPSF7-226ENST00000626926 SAMD7Q7Z3H4 446 aa11.25□□□□□ -0.61
CPSF7-226ENST00000626926 AIDAQ96BJ3 306 aa11.25□□□□□ -0.61
CPSF7-226ENST00000626926 MYH16Q9H6N6 1097 aa11.25□□□□□ -0.61
CPSF7-226ENST00000626926 SPINK5Q9NQ38 1064 aaPredicted RBP11.25□□□□□ -0.61
CPSF7-226ENST00000626926 MINPP1Q9UNW1 487 aa11.25□□□□□ -0.61
CPSF7-226ENST00000626926 PAPPA2Q9BXP8 1791 aa11.24□□□□□ -0.61
CPSF7-226ENST00000626926 ECM29Q5VYK3 1845 aa11.24□□□□□ -0.61
CPSF7-226ENST00000626926 HSPA8P11142 646 aaKnown RBP11.24□□□□□ -0.61
CPSF7-226ENST00000626926 KIF4BQ2VIQ3 1234 aa11.24□□□□□ -0.61
CPSF7-226ENST00000626926 CCDC85AQ96PX6 553 aaPredicted RBP11.24□□□□□ -0.61
CPSF7-226ENST00000626926 CCT4P50991 539 aaKnown RBP11.23□□□□□ -0.61
CPSF7-226ENST00000626926 FAM161AQ3B820 660 aa11.23□□□□□ -0.61
CPSF7-226ENST00000626926 TBC1D10BQ4KMP7 808 aaPredicted RBP11.23□□□□□ -0.61
CPSF7-226ENST00000626926 BEND3Q5T5X7 828 aa11.23□□□□□ -0.61
CPSF7-226ENST00000626926 CYP4F22Q6NT55 531 aa11.23□□□□□ -0.61
CPSF7-226ENST00000626926 KRT26Q7Z3Y9 468 aa11.23□□□□□ -0.61
CPSF7-226ENST00000626926 LEMD3Q9Y2U8 911 aa11.23□□□□□ -0.61
CPSF7-226ENST00000626926 PITPNM2Q9BZ72 1349 aa11.23□□□□□ -0.61
CPSF7-226ENST00000626926 IRS2Q9Y4H2 1338 aa11.23□□□□□ -0.61
CPSF7-226ENST00000626926 ARAP2Q8WZ64 1704 aa11.23□□□□□ -0.61
CPSF7-226ENST00000626926 USP17L3A6NCW0 530 aa11.22□□□□□ -0.61
CPSF7-226ENST00000626926 USP17L4A6NCW7 530 aa11.22□□□□□ -0.61
CPSF7-226ENST00000626926 LAMB1P07942 1786 aa11.22□□□□□ -0.61
CPSF7-226ENST00000626926 ITGA6P23229 1130 aa11.22□□□□□ -0.61
CPSF7-226ENST00000626926 MMP14P50281 582 aa11.22□□□□□ -0.61
CPSF7-226ENST00000626926 BRPF1P55201 1214 aaPredicted RBP11.22□□□□□ -0.61
CPSF7-226ENST00000626926 USP17L1Q7RTZ2 530 aa11.22□□□□□ -0.61
CPSF7-226ENST00000626926 MYO3BQ8WXR4 1341 aa11.22□□□□□ -0.61
CPSF7-226ENST00000626926 WTIPA6NIX2 430 aaPredicted RBP11.21□□□□□ -0.61
CPSF7-226ENST00000626926 CA12O43570 354 aa11.21□□□□□ -0.61
CPSF7-226ENST00000626926 USP17L8P0C7I0 530 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms