RNA–Protein interactions for RNA: ENST00000626188.1

CHRNA4-208, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

Gene CHRNA4, Length 441 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-208ENST00000626188 NFE2L2Q16236 605 aa20.25■□□□□ 0.83
CHRNA4-208ENST00000626188 ANGEL2Q5VTE6 544 aaKnown RBP20.25■□□□□ 0.83
CHRNA4-208ENST00000626188 XAGE3Q8WTP9 111 aa20.25■□□□□ 0.83
CHRNA4-208ENST00000626188 NECTIN2Q92692 538 aa20.25■□□□□ 0.83
CHRNA4-208ENST00000626188 CELF1Q92879 486 aaKnown RBP20.25■□□□□ 0.83
CHRNA4-208ENST00000626188 TAF1P21675 1872 aa20.24■□□□□ 0.83
CHRNA4-208ENST00000626188 DLG5Q8TDM6 1919 aa20.24■□□□□ 0.83
CHRNA4-208ENST00000626188 LRRC37AA6NMS7 1700 aa20.24■□□□□ 0.83
CHRNA4-208ENST00000626188 VIL1P09327 827 aaKnown RBP20.23■□□□□ 0.83
CHRNA4-208ENST00000626188 SCARF1Q14162 830 aa20.23■□□□□ 0.83
CHRNA4-208ENST00000626188 ZC3H12CQ9C0D7 883 aaKnown RBP20.23■□□□□ 0.83
CHRNA4-208ENST00000626188 FBXO46Q6PJ61 603 aaPredicted RBP20.22■□□□□ 0.83
CHRNA4-208ENST00000626188 MAPK8IP3Q9UPT6 1336 aa20.22■□□□□ 0.83
CHRNA4-208ENST00000626188 TBC1D16Q8TBP0 767 aa20.21■□□□□ 0.83
CHRNA4-208ENST00000626188 DDX60Q8IY21 1712 aaKnown RBP20.21■□□□□ 0.83
CHRNA4-208ENST00000626188 GPR25O00155 361 aa20.2■□□□□ 0.82
CHRNA4-208ENST00000626188 TTLL12Q14166 644 aaPredicted RBP20.2■□□□□ 0.82
CHRNA4-208ENST00000626188 MOB2Q70IA6 237 aa20.2■□□□□ 0.82
CHRNA4-208ENST00000626188 PLEKHF1Q96S99 279 aa20.2■□□□□ 0.82
CHRNA4-208ENST00000626188 PAPPA2Q9BXP8 1791 aa20.2■□□□□ 0.82
CHRNA4-208ENST00000626188 UBE2Q2LH0YL09 131 aa20.19■□□□□ 0.82
CHRNA4-208ENST00000626188 ZNF280AP59817 542 aaPredicted RBP20.19■□□□□ 0.82
CHRNA4-208ENST00000626188 SF3B3Q15393 1217 aaKnown RBP20.19■□□□□ 0.82
CHRNA4-208ENST00000626188 HABP4Q5JVS0 413 aaKnown RBP20.19■□□□□ 0.82
CHRNA4-208ENST00000626188 FAM89AQ96GI7 184 aa20.19■□□□□ 0.82
CHRNA4-208ENST00000626188 PNNQ9H307 717 aaKnown RBP20.19■□□□□ 0.82
CHRNA4-208ENST00000626188 UFL1O94874 794 aa20.18■□□□□ 0.82
CHRNA4-208ENST00000626188 RSBN1LQ6PCB5 846 aaPredicted RBP20.18■□□□□ 0.82
CHRNA4-208ENST00000626188 AGBL3Q8NEM8 1001 aa20.18■□□□□ 0.82
CHRNA4-208ENST00000626188 ANKIB1Q9P2G1 1089 aa20.18■□□□□ 0.82
CHRNA4-208ENST00000626188 FKTNO75072 461 aa20.17■□□□□ 0.82
CHRNA4-208ENST00000626188 RPS8P62241 208 aaKnown RBP20.17■□□□□ 0.82
CHRNA4-208ENST00000626188 MKRN3Q13064 507 aaKnown RBP20.17■□□□□ 0.82
CHRNA4-208ENST00000626188 RTL5Q5HYW3 569 aaPredicted RBP20.17■□□□□ 0.82
CHRNA4-208ENST00000626188 MYOZ2Q9NPC6 264 aa20.17■□□□□ 0.82
CHRNA4-208ENST00000626188 SCAF8Q9UPN6 1271 aaKnown RBP20.17■□□□□ 0.82
CHRNA4-208ENST00000626188 PITPNM2Q9BZ72 1349 aa20.17■□□□□ 0.82
CHRNA4-208ENST00000626188 USP17L8P0C7I0 530 aa20.16■□□□□ 0.82
CHRNA4-208ENST00000626188 TM4SF4P48230 202 aa20.16■□□□□ 0.82
CHRNA4-208ENST00000626188 SREBF2Q12772 1141 aa20.16■□□□□ 0.82
CHRNA4-208ENST00000626188 NOM1Q5C9Z4 860 aaKnown RBP20.16■□□□□ 0.82
CHRNA4-208ENST00000626188 ATP5J2-PTCD1G3V325 749 aa20.15■□□□□ 0.82
CHRNA4-208ENST00000626188 PRAMEF18Q5VWM3 479 aa20.15■□□□□ 0.82
CHRNA4-208ENST00000626188 GGA1Q9UJY5 639 aa20.15■□□□□ 0.82
CHRNA4-208ENST00000626188 NF2P35240 595 aa20.14■□□□□ 0.81
CHRNA4-208ENST00000626188 PLBD2Q8NHP8 589 aa20.14■□□□□ 0.81
CHRNA4-208ENST00000626188 PODXL2Q9NZ53 605 aa20.14■□□□□ 0.81
CHRNA4-208ENST00000626188 SCN9AQ15858 1988 aa20.14■□□□□ 0.81
CHRNA4-208ENST00000626188 IRS4O14654 1257 aaPredicted RBP20.13■□□□□ 0.81
CHRNA4-208ENST00000626188 ANKRD13DQ6ZTN6 518 aa20.13■□□□□ 0.81
CHRNA4-208ENST00000626188 BABAM1Q9NWV8 329 aa20.13■□□□□ 0.81
CHRNA4-208ENST00000626188 CHPF2Q9P2E5 772 aa20.13■□□□□ 0.81
CHRNA4-208ENST00000626188 RIPK4P57078 832 aa20.12■□□□□ 0.81
CHRNA4-208ENST00000626188 ISCA1Q9BUE6 129 aa20.12■□□□□ 0.81
CHRNA4-208ENST00000626188 ZNF609O15014 1411 aa20.11■□□□□ 0.81
CHRNA4-208ENST00000626188 COL4A1P02462 1669 aa20.11■□□□□ 0.81
CHRNA4-208ENST00000626188 USP17L3A6NCW0 530 aa20.1■□□□□ 0.81
CHRNA4-208ENST00000626188 USP17L4A6NCW7 530 aa20.1■□□□□ 0.81
CHRNA4-208ENST00000626188 INTS3Q68E01 1043 aaKnown RBP20.1■□□□□ 0.81
CHRNA4-208ENST00000626188 USP17L1Q7RTZ2 530 aa20.1■□□□□ 0.81
CHRNA4-208ENST00000626188 GMLQ99445 158 aa20.1■□□□□ 0.81
CHRNA4-208ENST00000626188 R3HDMLQ9H3Y0 253 aa20.1■□□□□ 0.81
CHRNA4-208ENST00000626188 SEC31BQ9NQW1 1179 aa20.1■□□□□ 0.81
CHRNA4-208ENST00000626188 TRIM17Q9Y577 477 aa20.1■□□□□ 0.81
CHRNA4-208ENST00000626188 NBPF9Q3BBW0 867 aa20.09■□□□□ 0.81
CHRNA4-208ENST00000626188 CFHR5Q9BXR6 569 aa20.09■□□□□ 0.81
CHRNA4-208ENST00000626188 POTEFA5A3E0 1075 aa20.08■□□□□ 0.81
CHRNA4-208ENST00000626188 ALDH1A1P00352 501 aa20.08■□□□□ 0.81
CHRNA4-208ENST00000626188 HSP90B1P14625 803 aaKnown RBP20.08■□□□□ 0.81
CHRNA4-208ENST00000626188 LMOD3Q0VAK6 560 aa20.08■□□□□ 0.81
CHRNA4-208ENST00000626188 PRKG1Q13976 671 aa20.08■□□□□ 0.81
CHRNA4-208ENST00000626188 KRT24Q2M2I5 525 aa20.08■□□□□ 0.81
CHRNA4-208ENST00000626188 HDGFL1Q5TGJ6 251 aa20.08■□□□□ 0.81
CHRNA4-208ENST00000626188 ARMC9Q7Z3E5 817 aa20.08■□□□□ 0.81
CHRNA4-208ENST00000626188 OGFOD1Q8N543 542 aa20.08■□□□□ 0.81
CHRNA4-208ENST00000626188 PTPN12Q05209 780 aaKnown RBP20.07■□□□□ 0.8
CHRNA4-208ENST00000626188 PODNQ7Z5L7 613 aa20.07■□□□□ 0.8
CHRNA4-208ENST00000626188 XDHP47989 1333 aa20.06■□□□□ 0.8
CHRNA4-208ENST00000626188 CCDC152Q4G0S7 254 aa20.06■□□□□ 0.8
CHRNA4-208ENST00000626188 FBXW7Q969H0 707 aa20.06■□□□□ 0.8
CHRNA4-208ENST00000626188 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.06■□□□□ 0.8
CHRNA4-208ENST00000626188 DBF4Q9UBU7 674 aaPredicted RBP20.06■□□□□ 0.8
CHRNA4-208ENST00000626188 LAS1LQ9Y4W2 734 aaKnown RBP20.06■□□□□ 0.8
CHRNA4-208ENST00000626188 OTOP1Q7RTM1 612 aa20.05■□□□□ 0.8
CHRNA4-208ENST00000626188 ZBTB38Q8NAP3 1195 aaPredicted RBP20.05■□□□□ 0.8
CHRNA4-208ENST00000626188 WNT10BO00744 389 aa20.04■□□□□ 0.8
CHRNA4-208ENST00000626188 ATP2B4P23634 1241 aa20.04■□□□□ 0.8
CHRNA4-208ENST00000626188 FXR1P51114 621 aaKnown RBP eCLIP20.04■□□□□ 0.8
CHRNA4-208ENST00000626188 TRIM28Q13263 835 aaKnown RBP20.04■□□□□ 0.8
CHRNA4-208ENST00000626188 SPRYD7Q5W111 196 aa20.04■□□□□ 0.8
CHRNA4-208ENST00000626188 CCDC85AQ96PX6 553 aaPredicted RBP20.04■□□□□ 0.8
CHRNA4-208ENST00000626188 RIC3Q7Z5B4 369 aa20.03■□□□□ 0.8
CHRNA4-208ENST00000626188 ANKRD18AQ8IVF6 992 aa20.03■□□□□ 0.8
CHRNA4-208ENST00000626188 HYPKQ9NX55 129 aa20.03■□□□□ 0.8
CHRNA4-208ENST00000626188 ANGEL1Q9UNK9 670 aaKnown RBP20.03■□□□□ 0.8
CHRNA4-208ENST00000626188 PSME4Q14997 1843 aa20.02■□□□□ 0.8
CHRNA4-208ENST00000626188 MANSC4A6NHS7 340 aaPredicted RBP20.02■□□□□ 0.8
CHRNA4-208ENST00000626188 SASH1O94885 1247 aa20.02■□□□□ 0.8
CHRNA4-208ENST00000626188 TMPOP42166 694 aaKnown RBP20.02■□□□□ 0.8
CHRNA4-208ENST00000626188 INHBEP58166 350 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms