RNA–Protein interactions for RNA: ENST00000625705.1

NPLOC4-221, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5 BASIC

Gene NPLOC4, Length 405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-221ENST00000625705 DPEP1P16444 411 aa9.21□□□□□ -0.94
NPLOC4-221ENST00000625705 CHRNA5P30532 468 aa9.21□□□□□ -0.94
NPLOC4-221ENST00000625705 PRR5LQ6MZQ0 368 aa9.21□□□□□ -0.94
NPLOC4-221ENST00000625705 ZNF622Q969S3 477 aaKnown RBP eCLIP9.21□□□□□ -0.94
NPLOC4-221ENST00000625705 ZNF428Q96B54 188 aa9.21□□□□□ -0.94
NPLOC4-221ENST00000625705 UTP14AQ9BVJ6 771 aaKnown RBP9.21□□□□□ -0.94
NPLOC4-221ENST00000625705 KIAA1468Q9P260 1216 aa9.21□□□□□ -0.94
NPLOC4-221ENST00000625705 BCS1LQ9Y276 419 aa9.21□□□□□ -0.94
NPLOC4-221ENST00000625705 ATP5J2-PTCD1G3V325 749 aa9.2□□□□□ -0.94
NPLOC4-221ENST00000625705 VAMP4O75379 141 aa9.2□□□□□ -0.94
NPLOC4-221ENST00000625705 FLIIQ13045 1269 aa9.2□□□□□ -0.94
NPLOC4-221ENST00000625705 TCIRG1Q13488 830 aa9.2□□□□□ -0.94
NPLOC4-221ENST00000625705 NBR1Q14596 966 aa9.2□□□□□ -0.94
NPLOC4-221ENST00000625705 LRP10Q7Z4F1 713 aa9.2□□□□□ -0.94
NPLOC4-221ENST00000625705 NUTM1Q86Y26 1132 aa9.2□□□□□ -0.94
NPLOC4-221ENST00000625705 RPGRQ92834 1020 aaKnown RBP9.2□□□□□ -0.94
NPLOC4-221ENST00000625705 MYD88Q99836 296 aa9.2□□□□□ -0.94
NPLOC4-221ENST00000625705 BRIP1Q9BX63 1249 aa9.2□□□□□ -0.94
NPLOC4-221ENST00000625705 SMC4Q9NTJ3 1288 aa9.2□□□□□ -0.94
NPLOC4-221ENST00000625705 PIM2Q9P1W9 311 aa9.2□□□□□ -0.94
NPLOC4-221ENST00000625705 TRMT112Q9UI30 125 aaKnown RBP9.2□□□□□ -0.94
NPLOC4-221ENST00000625705 MAP3K2Q9Y2U5 619 aa9.2□□□□□ -0.94
NPLOC4-221ENST00000625705 UBN2Q6ZU65 1347 aa9.2□□□□□ -0.94
NPLOC4-221ENST00000625705 CACNA1FO60840 1977 aa9.19□□□□□ -0.94
NPLOC4-221ENST00000625705 ERFEQ4G0M1 354 aa9.19□□□□□ -0.94
NPLOC4-221ENST00000625705 DALRD3Q5D0E6 543 aaKnown RBP9.19□□□□□ -0.94
NPLOC4-221ENST00000625705 RTL5Q5HYW3 569 aaPredicted RBP9.19□□□□□ -0.94
NPLOC4-221ENST00000625705 SUSD4Q5VX71 490 aa9.19□□□□□ -0.94
NPLOC4-221ENST00000625705 ZNF34Q8IZ26 560 aa9.19□□□□□ -0.94
NPLOC4-221ENST00000625705 BCL2L13Q9BXK5 485 aa9.19□□□□□ -0.94
NPLOC4-221ENST00000625705 PDZRN3Q9UPQ7 1066 aa9.19□□□□□ -0.94
NPLOC4-221ENST00000625705 ZBED9Q6R2W3 1325 aa9.19□□□□□ -0.94
NPLOC4-221ENST00000625705 IBTKQ9P2D0 1353 aaPredicted RBP9.19□□□□□ -0.94
NPLOC4-221ENST00000625705 CACNA1SQ13698 1873 aa9.19□□□□□ -0.94
NPLOC4-221ENST00000625705 ANKRD31Q8N7Z5 1873 aa9.19□□□□□ -0.94
NPLOC4-221ENST00000625705 PI4KAP2A4QPH2 592 aa9.18□□□□□ -0.94
NPLOC4-221ENST00000625705 SPDYE16A6NNV3 312 aaPredicted RBP9.18□□□□□ -0.94
NPLOC4-221ENST00000625705 GRIN3BO60391 1043 aa9.18□□□□□ -0.94
NPLOC4-221ENST00000625705 COL11A2P13942 1736 aaPredicted RBP9.18□□□□□ -0.94
NPLOC4-221ENST00000625705 RNF123Q5XPI4 1314 aa9.18□□□□□ -0.94
NPLOC4-221ENST00000625705 SLC4A10Q6U841 1118 aa9.18□□□□□ -0.94
NPLOC4-221ENST00000625705 KSR2Q6VAB6 950 aa9.18□□□□□ -0.94
NPLOC4-221ENST00000625705 G2E3Q7L622 706 aa9.18□□□□□ -0.94
NPLOC4-221ENST00000625705 NLRP10Q86W26 655 aa9.18□□□□□ -0.94
NPLOC4-221ENST00000625705 PI4KAP1Q8N8J0 262 aa9.18□□□□□ -0.94
NPLOC4-221ENST00000625705 SH3TC1Q8TE82 1336 aa9.18□□□□□ -0.94
NPLOC4-221ENST00000625705 ABCC12Q96J65 1359 aa9.18□□□□□ -0.94
NPLOC4-221ENST00000625705 YTHDC1Q96MU7 727 aaKnown RBP9.18□□□□□ -0.94
NPLOC4-221ENST00000625705 KIAA1551Q9HCM1 1747 aa9.18□□□□□ -0.94
NPLOC4-221ENST00000625705 DLEC1Q9Y238 1755 aa9.18□□□□□ -0.94
NPLOC4-221ENST00000625705 MAP3K7O43318 606 aa9.17□□□□□ -0.94
NPLOC4-221ENST00000625705 NTSR2O95665 410 aa9.17□□□□□ -0.94
NPLOC4-221ENST00000625705 CT47B1P0C2W7 299 aaPredicted RBP9.17□□□□□ -0.94
NPLOC4-221ENST00000625705 HSP90B1P14625 803 aaKnown RBP9.17□□□□□ -0.94
NPLOC4-221ENST00000625705 YBX3P16989 372 aaKnown RBP eCLIP9.17□□□□□ -0.94
NPLOC4-221ENST00000625705 TSR1Q2NL82 804 aaKnown RBP9.17□□□□□ -0.94
NPLOC4-221ENST00000625705 TTLL6Q8N841 843 aa9.17□□□□□ -0.94
NPLOC4-221ENST00000625705 DNAAF4Q8WXU2 420 aa9.17□□□□□ -0.94
NPLOC4-221ENST00000625705 CNKSR1Q969H4 720 aa9.17□□□□□ -0.94
NPLOC4-221ENST00000625705 NLRP3Q96P20 1036 aa9.17□□□□□ -0.94
NPLOC4-221ENST00000625705 METTL22Q9BUU2 404 aaPredicted RBP9.17□□□□□ -0.94
NPLOC4-221ENST00000625705 TMX4Q9H1E5 349 aaPredicted RBP9.17□□□□□ -0.94
NPLOC4-221ENST00000625705 CWC25Q9NXE8 425 aaPredicted RBP9.17□□□□□ -0.94
NPLOC4-221ENST00000625705 TNRC6CQ9HCJ0 1690 aaKnown RBP9.16□□□□□ -0.94
NPLOC4-221ENST00000625705 ADCY9O60503 1353 aa9.16□□□□□ -0.94
NPLOC4-221ENST00000625705 NPR1P16066 1061 aa9.16□□□□□ -0.94
NPLOC4-221ENST00000625705 STYK1Q6J9G0 422 aa9.16□□□□□ -0.94
NPLOC4-221ENST00000625705 ARHGAP27Q6ZUM4 889 aa9.16□□□□□ -0.94
NPLOC4-221ENST00000625705 CCDC191Q8NCU4 936 aa9.16□□□□□ -0.94
NPLOC4-221ENST00000625705 ANKK1Q8NFD2 765 aa9.16□□□□□ -0.94
NPLOC4-221ENST00000625705 MASTLQ96GX5 879 aa9.16□□□□□ -0.94
NPLOC4-221ENST00000625705 SEPT9Q9UHD8 586 aaPredicted RBP9.16□□□□□ -0.94
NPLOC4-221ENST00000625705 BRCA1P38398 1863 aaKnown RBP9.16□□□□□ -0.94
NPLOC4-221ENST00000625705 PTPRCP08575 1304 aa9.15□□□□□ -0.94
NPLOC4-221ENST00000625705 KIF16BQ96L93 1317 aa9.15□□□□□ -0.94
NPLOC4-221ENST00000625705 TRIM6-TRIM34B2RNG4 842 aa9.15□□□□□ -0.94
NPLOC4-221ENST00000625705 F6X3S4 739 aa9.15□□□□□ -0.94
NPLOC4-221ENST00000625705 SRGNP10124 158 aa9.15□□□□□ -0.94
NPLOC4-221ENST00000625705 HCLS1P14317 486 aaPredicted RBP9.15□□□□□ -0.94
NPLOC4-221ENST00000625705 CWF19L2Q2TBE0 894 aaKnown RBP9.15□□□□□ -0.94
NPLOC4-221ENST00000625705 ALDH1L2Q3SY69 923 aa9.15□□□□□ -0.94
NPLOC4-221ENST00000625705 SSH1Q8WYL5 1049 aa9.15□□□□□ -0.94
NPLOC4-221ENST00000625705 FAM89AQ96GI7 184 aa9.15□□□□□ -0.94
NPLOC4-221ENST00000625705 ISCA1Q9BUE6 129 aa9.15□□□□□ -0.94
NPLOC4-221ENST00000625705 ARFGEF1Q9Y6D6 1849 aa9.15□□□□□ -0.95
NPLOC4-221ENST00000625705 RIC1Q4ADV7 1423 aa9.14□□□□□ -0.95
NPLOC4-221ENST00000625705 LAMB2P55268 1798 aa9.14□□□□□ -0.95
NPLOC4-221ENST00000625705 GRXCR2A6NFK2 248 aa9.14□□□□□ -0.95
NPLOC4-221ENST00000625705 IRS4O14654 1257 aaPredicted RBP9.14□□□□□ -0.95
NPLOC4-221ENST00000625705 ALDH1B1P30837 517 aa9.14□□□□□ -0.95
NPLOC4-221ENST00000625705 BCAMP50895 628 aa9.14□□□□□ -0.95
NPLOC4-221ENST00000625705 PRPF40BQ6NWY9 871 aaKnown RBP9.14□□□□□ -0.95
NPLOC4-221ENST00000625705 DDX46Q7L014 1031 aaKnown RBP9.14□□□□□ -0.95
NPLOC4-221ENST00000625705 UBE3BQ7Z3V4 1068 aa9.14□□□□□ -0.95
NPLOC4-221ENST00000625705 LAPTM4BQ86VI4 370 aa9.14□□□□□ -0.95
NPLOC4-221ENST00000625705 TRMT2AQ8IZ69 625 aaKnown RBP9.14□□□□□ -0.95
NPLOC4-221ENST00000625705 ZBTB38Q8NAP3 1195 aaPredicted RBP9.14□□□□□ -0.95
NPLOC4-221ENST00000625705 LINS1Q8NG48 757 aa9.14□□□□□ -0.95
NPLOC4-221ENST00000625705 FRAT1Q92837 279 aaPredicted RBP9.14□□□□□ -0.95
NPLOC4-221ENST00000625705 RBM17Q96I25 401 aaKnown RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms