RNA–Protein interactions for RNA: ENST00000624822.1

LINC01560-202, Transcript of long intergenic non-protein coding RNA 1560, humanhuman

Gene LINC01560, Length 1,238 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560-202ENST00000624822 IPO8O15397 1037 aaKnown RBP12.07□□□□□ -0.48
LINC01560-202ENST00000624822 BRPF1P55201 1214 aaPredicted RBP12.07□□□□□ -0.48
LINC01560-202ENST00000624822 CCDC152Q4G0S7 254 aa12.07□□□□□ -0.48
LINC01560-202ENST00000624822 TMX4Q9H1E5 349 aaPredicted RBP12.07□□□□□ -0.48
LINC01560-202ENST00000624822 GOLGB1Q14789 3259 aaKnown RBP12.07□□□□□ -0.48
LINC01560-202ENST00000624822 H7C1W4 665 aa12.06□□□□□ -0.48
LINC01560-202ENST00000624822 GRM8O00222 908 aa12.06□□□□□ -0.48
LINC01560-202ENST00000624822 ST18O60284 1047 aa12.06□□□□□ -0.48
LINC01560-202ENST00000624822 HOXA10P31260 410 aaPredicted RBP12.06□□□□□ -0.48
LINC01560-202ENST00000624822 CTSWP56202 376 aa12.06□□□□□ -0.48
LINC01560-202ENST00000624822 RASSF7Q02833 373 aa12.06□□□□□ -0.48
LINC01560-202ENST00000624822 SOGA3Q5TF21 947 aa12.06□□□□□ -0.48
LINC01560-202ENST00000624822 SPOCK2Q92563 424 aa12.06□□□□□ -0.48
LINC01560-202ENST00000624822 CRAMP1Q96RY5 1269 aa12.06□□□□□ -0.48
LINC01560-202ENST00000624822 CHMP3Q9Y3E7 222 aa12.06□□□□□ -0.48
LINC01560-202ENST00000624822 LRRC37AA6NMS7 1700 aa12.06□□□□□ -0.48
LINC01560-202ENST00000624822 YY1P25490 414 aa12.05□□□□□ -0.48
LINC01560-202ENST00000624822 PSEN1P49768 467 aa12.05□□□□□ -0.48
LINC01560-202ENST00000624822 CCT4P50991 539 aaKnown RBP12.05□□□□□ -0.48
LINC01560-202ENST00000624822 GRAPQ13588 217 aa12.05□□□□□ -0.48
LINC01560-202ENST00000624822 SF3B3Q15393 1217 aaKnown RBP12.05□□□□□ -0.48
LINC01560-202ENST00000624822 CCDC93Q567U6 631 aa12.05□□□□□ -0.48
LINC01560-202ENST00000624822 ZKSCAN2Q63HK3 967 aa12.05□□□□□ -0.48
LINC01560-202ENST00000624822 PDCD7Q8N8D1 485 aaKnown RBP12.05□□□□□ -0.48
LINC01560-202ENST00000624822 GRAPLQ8TC17 118 aaPredicted RBP12.05□□□□□ -0.48
LINC01560-202ENST00000624822 ARHGAP45Q92619 1136 aa12.05□□□□□ -0.48
LINC01560-202ENST00000624822 CLUAP1Q96AJ1 413 aa12.05□□□□□ -0.48
LINC01560-202ENST00000624822 CIZ1Q9ULV3 898 aaPredicted RBP12.05□□□□□ -0.48
LINC01560-202ENST00000624822 COL4A1P02462 1669 aa12.04□□□□□ -0.48
LINC01560-202ENST00000624822 TRIM27P14373 513 aa12.04□□□□□ -0.48
LINC01560-202ENST00000624822 OLFM4Q6UX06 510 aa12.04□□□□□ -0.48
LINC01560-202ENST00000624822 ATF7IPQ6VMQ6 1270 aa12.04□□□□□ -0.48
LINC01560-202ENST00000624822 FTSJ3Q8IY81 847 aaKnown RBP12.04□□□□□ -0.48
LINC01560-202ENST00000624822 BBOX1O75936 387 aa12.03□□□□□ -0.48
LINC01560-202ENST00000624822 NBPF7P0C2Y1 421 aaPredicted RBP12.03□□□□□ -0.48
LINC01560-202ENST00000624822 CASP7P55210 303 aa12.03□□□□□ -0.48
LINC01560-202ENST00000624822 TTLL11Q8NHH1 800 aa12.03□□□□□ -0.48
LINC01560-202ENST00000624822 CELF1Q92879 486 aaKnown RBP12.03□□□□□ -0.48
LINC01560-202ENST00000624822 PLA2G12BQ9BX93 195 aa12.03□□□□□ -0.48
LINC01560-202ENST00000624822 TAOK3Q9H2K8 898 aa12.03□□□□□ -0.48
LINC01560-202ENST00000624822 SEC31BQ9NQW1 1179 aa12.03□□□□□ -0.48
LINC01560-202ENST00000624822 RNF181Q9P0P0 153 aa12.03□□□□□ -0.48
LINC01560-202ENST00000624822 RCAN3Q9UKA8 241 aa12.03□□□□□ -0.48
LINC01560-202ENST00000624822 TNNQ9UQP3 1299 aa12.03□□□□□ -0.48
LINC01560-202ENST00000624822 UTRNP46939 3433 aa12.03□□□□□ -0.48
LINC01560-202ENST00000624822 NFKBIEO00221 500 aa12.02□□□□□ -0.49
LINC01560-202ENST00000624822 MKRN3Q13064 507 aaKnown RBP12.02□□□□□ -0.49
LINC01560-202ENST00000624822 ANKRD18AQ8IVF6 992 aa12.02□□□□□ -0.49
LINC01560-202ENST00000624822 RTKN2Q8IZC4 609 aa12.02□□□□□ -0.49
LINC01560-202ENST00000624822 SUCLG2Q96I99 432 aa12.02□□□□□ -0.49
LINC01560-202ENST00000624822 CDC5LQ99459 802 aaKnown RBP12.02□□□□□ -0.49
LINC01560-202ENST00000624822 GREM2Q9H772 168 aa12.02□□□□□ -0.49
LINC01560-202ENST00000624822 A0A1B0GUL6 1792 aa12.02□□□□□ -0.49
LINC01560-202ENST00000624822 UBTFL1P0CB47 393 aaPredicted RBP12.01□□□□□ -0.49
LINC01560-202ENST00000624822 LMNB1P20700 586 aa12.01□□□□□ -0.49
LINC01560-202ENST00000624822 ITGA6P23229 1130 aa12.01□□□□□ -0.49
LINC01560-202ENST00000624822 RPS8P62241 208 aaKnown RBP12.01□□□□□ -0.49
LINC01560-202ENST00000624822 FKBP4Q02790 459 aaKnown RBP eCLIP12.01□□□□□ -0.49
LINC01560-202ENST00000624822 FAM161AQ3B820 660 aa12.01□□□□□ -0.49
LINC01560-202ENST00000624822 C9orf131Q5VYM1 1079 aa12.01□□□□□ -0.49
LINC01560-202ENST00000624822 CC2D2BQ6DHV5 1058 aa12.01□□□□□ -0.49
LINC01560-202ENST00000624822 TMC4Q7Z404 712 aa12.01□□□□□ -0.49
LINC01560-202ENST00000624822 SLC51AQ86UW1 340 aa12.01□□□□□ -0.49
LINC01560-202ENST00000624822 SP8Q8IXZ3 490 aa12.01□□□□□ -0.49
LINC01560-202ENST00000624822 C7orf43Q8WVR3 580 aa12.01□□□□□ -0.49
LINC01560-202ENST00000624822 ATP6V0A2Q9Y487 856 aa12.01□□□□□ -0.49
LINC01560-202ENST00000624822 ANKRD18BA2A2Z9 1011 aa12□□□□□ -0.49
LINC01560-202ENST00000624822 IGHMBP2P38935 993 aaKnown RBP12□□□□□ -0.49
LINC01560-202ENST00000624822 FOXO4P98177 505 aa12□□□□□ -0.49
LINC01560-202ENST00000624822 TAF7LQ5H9L4 462 aa12□□□□□ -0.49
LINC01560-202ENST00000624822 EPHA10Q5JZY3 1008 aa12□□□□□ -0.49
LINC01560-202ENST00000624822 LMBR1LQ6UX01 489 aa12□□□□□ -0.49
LINC01560-202ENST00000624822 DZIP1LQ8IYY4 767 aaKnown RBP12□□□□□ -0.49
LINC01560-202ENST00000624822 TMEM57Q8N5G2 664 aa12□□□□□ -0.49
LINC01560-202ENST00000624822 USP44Q9H0E7 712 aa12□□□□□ -0.49
LINC01560-202ENST00000624822 BICC1Q9H694 974 aaKnown RBP12□□□□□ -0.49
LINC01560-202ENST00000624822 EIF2AK3Q9NZJ5 1116 aaKnown RBP12□□□□□ -0.49
LINC01560-202ENST00000624822 UTYO14607 1347 aa12□□□□□ -0.49
LINC01560-202ENST00000624822 CSF1RP07333 972 aa11.99□□□□□ -0.49
LINC01560-202ENST00000624822 IFIT5Q13325 482 aaKnown RBP11.99□□□□□ -0.49
LINC01560-202ENST00000624822 CCDC57Q2TAC2 916 aa11.99□□□□□ -0.49
LINC01560-202ENST00000624822 GRIPAP1Q4V328 841 aa11.99□□□□□ -0.49
LINC01560-202ENST00000624822 INTS3Q68E01 1043 aaKnown RBP11.99□□□□□ -0.49
LINC01560-202ENST00000624822 DPP8Q6V1X1 898 aaPredicted RBP11.99□□□□□ -0.49
LINC01560-202ENST00000624822 ITPRIPQ8IWB1 547 aa11.99□□□□□ -0.49
LINC01560-202ENST00000624822 MPNDQ8N594 471 aa11.99□□□□□ -0.49
LINC01560-202ENST00000624822 MPHOSPH8Q99549 860 aa11.99□□□□□ -0.49
LINC01560-202ENST00000624822 ZNF277Q9NRM2 450 aaPredicted RBP11.99□□□□□ -0.49
LINC01560-202ENST00000624822 NSFL1CQ9UNZ2 370 aaKnown RBP11.99□□□□□ -0.49
LINC01560-202ENST00000624822 LTBP3Q9NS15 1303 aa11.99□□□□□ -0.49
LINC01560-202ENST00000624822 RTL9Q8NET4 1388 aa11.99□□□□□ -0.49
LINC01560-202ENST00000624822 LTBP1Q14766 1721 aa11.99□□□□□ -0.49
LINC01560-202ENST00000624822 PLIN1O60240 522 aa11.98□□□□□ -0.49
LINC01560-202ENST00000624822 MS4A1P11836 297 aa11.98□□□□□ -0.49
LINC01560-202ENST00000624822 CDAN1Q8IWY9 1227 aa11.98□□□□□ -0.49
LINC01560-202ENST00000624822 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.98□□□□□ -0.49
LINC01560-202ENST00000624822 PSMD1Q99460 953 aa11.98□□□□□ -0.49
LINC01560-202ENST00000624822 MEIS3Q99687 375 aa11.98□□□□□ -0.49
LINC01560-202ENST00000624822 ANKIB1Q9P2G1 1089 aa11.98□□□□□ -0.49
LINC01560-202ENST00000624822 HDAC5Q9UQL6 1122 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms