RNA–Protein interactions for RNA: ENST00000623073.3

ERCC6-209, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 1 (best)

Gene ERCC6, Length 11,026 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-209ENST00000623073 RNF10Q8N5U6 811 aaKnown RBP7.27□□□□□ -1.25
ERCC6-209ENST00000623073 NAPGQ99747 312 aaPredicted RBP7.27□□□□□ -1.25
ERCC6-209ENST00000623073 HOMER3Q9NSC5 361 aa7.27□□□□□ -1.25
ERCC6-209ENST00000623073 CCDC152Q4G0S7 254 aa7.26□□□□□ -1.25
ERCC6-209ENST00000623073 INTS8Q75QN2 995 aaKnown RBP7.26□□□□□ -1.25
ERCC6-209ENST00000623073 RABEP2Q9H5N1 569 aa7.26□□□□□ -1.25
ERCC6-209ENST00000623073 PSMA7O14818 248 aa7.26□□□□□ -1.25
ERCC6-209ENST00000623073 TRIM37O94972 964 aa7.26□□□□□ -1.25
ERCC6-209ENST00000623073 TMEM266Q2M3C6 531 aa7.26□□□□□ -1.25
ERCC6-209ENST00000623073 CNOT10Q9H9A5 744 aaKnown RBP7.26□□□□□ -1.25
ERCC6-209ENST00000623073 RAI14Q9P0K7 980 aa7.26□□□□□ -1.25
ERCC6-209ENST00000623073 PRIM1P49642 420 aaKnown RBP7.26□□□□□ -1.25
ERCC6-209ENST00000623073 MYL5Q02045 173 aa7.26□□□□□ -1.25
ERCC6-209ENST00000623073 RRP36Q96EU6 259 aaKnown RBP7.26□□□□□ -1.25
ERCC6-209ENST00000623073 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.26□□□□□ -1.25
ERCC6-209ENST00000623073 KCNJ6P48051 423 aa7.26□□□□□ -1.25
ERCC6-209ENST00000623073 CCDC170Q8IYT3 715 aa7.26□□□□□ -1.25
ERCC6-209ENST00000623073 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.26□□□□□ -1.25
ERCC6-209ENST00000623073 PPP2R5BQ15173 497 aa7.26□□□□□ -1.25
ERCC6-209ENST00000623073 SNCBQ16143 134 aa7.26□□□□□ -1.25
ERCC6-209ENST00000623073 FOXD1Q16676 465 aa7.26□□□□□ -1.25
ERCC6-209ENST00000623073 FAM177A1Q8N128 213 aaPredicted RBP7.26□□□□□ -1.25
ERCC6-209ENST00000623073 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.26□□□□□ -1.25
ERCC6-209ENST00000623073 POLR3AO14802 1390 aaPredicted RBP7.26□□□□□ -1.25
ERCC6-209ENST00000623073 WDHD1O75717 1129 aaPredicted RBP7.26□□□□□ -1.25
ERCC6-209ENST00000623073 MTHFSP49914 203 aa7.26□□□□□ -1.25
ERCC6-209ENST00000623073 ETF1P62495 437 aaKnown RBP7.26□□□□□ -1.25
ERCC6-209ENST00000623073 LZICQ8WZA0 190 aa7.26□□□□□ -1.25
ERCC6-209ENST00000623073 CCDC68Q9H2F9 335 aa7.26□□□□□ -1.25
ERCC6-209ENST00000623073 BCL2L12Q9HB09 334 aa7.26□□□□□ -1.25
ERCC6-209ENST00000623073 IGF1RP08069 1367 aa7.26□□□□□ -1.25
ERCC6-209ENST00000623073 BICDL1Q6ZP65 573 aa7.26□□□□□ -1.25
ERCC6-209ENST00000623073 MIS12Q9H081 205 aa7.26□□□□□ -1.25
ERCC6-209ENST00000623073 NFE2L2Q16236 605 aa7.25□□□□□ -1.25
ERCC6-209ENST00000623073 ARHGAP31Q2M1Z3 1444 aa7.25□□□□□ -1.25
ERCC6-209ENST00000623073 OSBPL9Q96SU4 736 aa7.25□□□□□ -1.25
ERCC6-209ENST00000623073 KDM5DQ9BY66 1539 aa7.25□□□□□ -1.25
ERCC6-209ENST00000623073 TRIM35Q9UPQ4 493 aa7.25□□□□□ -1.25
ERCC6-209ENST00000623073 PHLPP2Q6ZVD8 1323 aa7.25□□□□□ -1.25
ERCC6-209ENST00000623073 A0A087WZG4 1122 aa7.25□□□□□ -1.25
ERCC6-209ENST00000623073 N4BP3O15049 544 aa7.25□□□□□ -1.25
ERCC6-209ENST00000623073 EIF2AQ9BY44 585 aaKnown RBP7.25□□□□□ -1.25
ERCC6-209ENST00000623073 DAAM1Q9Y4D1 1078 aa7.25□□□□□ -1.25
ERCC6-209ENST00000623073 LRRC23Q53EV4 343 aaPredicted RBP7.25□□□□□ -1.25
ERCC6-209ENST00000623073 VPS53Q5VIR6 699 aa7.25□□□□□ -1.25
ERCC6-209ENST00000623073 WWC2Q6AWC2 1192 aa7.25□□□□□ -1.25
ERCC6-209ENST00000623073 BRPF1P55201 1214 aaPredicted RBP7.25□□□□□ -1.25
ERCC6-209ENST00000623073 ZFYVE27Q5T4F4 411 aa7.25□□□□□ -1.25
ERCC6-209ENST00000623073 SOGA3Q5TF21 947 aa7.25□□□□□ -1.25
ERCC6-209ENST00000623073 SCLT1Q96NL6 688 aa7.25□□□□□ -1.25
ERCC6-209ENST00000623073 TRIM4Q9C037 500 aa7.25□□□□□ -1.25
ERCC6-209ENST00000623073 TMX3Q96JJ7 454 aa7.25□□□□□ -1.25
ERCC6-209ENST00000623073 MTUS1Q9ULD2 1270 aa7.25□□□□□ -1.25
ERCC6-209ENST00000623073 PANK2Q9BZ23 570 aa7.25□□□□□ -1.25
ERCC6-209ENST00000623073 CALCOCO2Q13137 446 aa7.25□□□□□ -1.25
ERCC6-209ENST00000623073 CCDC84Q86UT8 332 aaPredicted RBP7.25□□□□□ -1.25
ERCC6-209ENST00000623073 UBAC1Q9BSL1 405 aa7.25□□□□□ -1.25
ERCC6-209ENST00000623073 FAM135AQ9P2D6 1515 aa7.25□□□□□ -1.25
ERCC6-209ENST00000623073 RIOK3O14730 519 aaKnown RBP7.25□□□□□ -1.25
ERCC6-209ENST00000623073 RNF40O75150 1001 aa7.25□□□□□ -1.25
ERCC6-209ENST00000623073 TCP11Q8WWU5 503 aa7.25□□□□□ -1.25
ERCC6-209ENST00000623073 ATAD2BQ9ULI0 1458 aa7.24□□□□□ -1.25
ERCC6-209ENST00000623073 ANKRD62A6NC57 917 aa7.24□□□□□ -1.25
ERCC6-209ENST00000623073 SYKP43405 635 aa7.24□□□□□ -1.25
ERCC6-209ENST00000623073 FBXO41Q8TF61 875 aa7.24□□□□□ -1.25
ERCC6-209ENST00000623073 RUNDC3BQ96NL0 473 aa7.24□□□□□ -1.25
ERCC6-209ENST00000623073 RRP15Q9Y3B9 282 aaKnown RBP7.24□□□□□ -1.25
ERCC6-209ENST00000623073 TERF2Q15554 542 aa7.24□□□□□ -1.25
ERCC6-209ENST00000623073 ANO6Q4KMQ2 910 aa7.24□□□□□ -1.25
ERCC6-209ENST00000623073 MLKLQ8NB16 471 aa7.24□□□□□ -1.25
ERCC6-209ENST00000623073 CCDC42Q96M95 316 aa7.24□□□□□ -1.25
ERCC6-209ENST00000623073 TSNARE1Q96NA8 513 aa7.24□□□□□ -1.25
ERCC6-209ENST00000623073 TROQ12816 1431 aaPredicted RBP7.24□□□□□ -1.25
ERCC6-209ENST00000623073 CFAP157Q5JU67 520 aa7.24□□□□□ -1.25
ERCC6-209ENST00000623073 ECHDC1Q9NTX5 307 aa7.24□□□□□ -1.25
ERCC6-209ENST00000623073 SENP3-EIF4A1A0A087X0R7 540 aa7.24□□□□□ -1.25
ERCC6-209ENST00000623073 LMNAP02545 664 aaKnown RBP7.24□□□□□ -1.25
ERCC6-209ENST00000623073 TRIML1Q8N9V2 468 aa7.24□□□□□ -1.25
ERCC6-209ENST00000623073 BAG1Q99933 345 aaPredicted RBP7.24□□□□□ -1.25
ERCC6-209ENST00000623073 GOLGA8QA0A0J9YX86 632 aa7.24□□□□□ -1.25
ERCC6-209ENST00000623073 GOLGA8OA6NCC3 632 aa7.24□□□□□ -1.25
ERCC6-209ENST00000623073 GOLGA8NF8WBI6 632 aa7.24□□□□□ -1.25
ERCC6-209ENST00000623073 SMC1BQ8NDV3 1235 aa7.24□□□□□ -1.25
ERCC6-209ENST00000623073 MPHOSPH6Q99547 160 aaKnown RBP7.24□□□□□ -1.25
ERCC6-209ENST00000623073 DRC3Q9H069 523 aa7.24□□□□□ -1.25
ERCC6-209ENST00000623073 TFIP11Q9UBB9 837 aaKnown RBP7.24□□□□□ -1.25
ERCC6-209ENST00000623073 ODF2LQ9ULJ1 636 aa7.24□□□□□ -1.25
ERCC6-209ENST00000623073 SKIP12755 728 aa7.24□□□□□ -1.25
ERCC6-209ENST00000623073 SATB1Q01826 763 aa7.24□□□□□ -1.25
ERCC6-209ENST00000623073 CREB3O43889 395 aa7.24□□□□□ -1.25
ERCC6-209ENST00000623073 ZNF75DP51815 510 aa7.24□□□□□ -1.25
ERCC6-209ENST00000623073 TANGO6Q9C0B7 1094 aa7.24□□□□□ -1.25
ERCC6-209ENST00000623073 TCP11L1Q9NUJ3 509 aa7.24□□□□□ -1.25
ERCC6-209ENST00000623073 C9orf84Q5VXU9 1444 aa7.24□□□□□ -1.25
ERCC6-209ENST00000623073 ATP5HO75947 161 aa7.24□□□□□ -1.25
ERCC6-209ENST00000623073 CCDC62Q6P9F0 684 aa7.24□□□□□ -1.25
ERCC6-209ENST00000623073 LARP1Q6PKG0 1096 aaKnown RBP7.24□□□□□ -1.25
ERCC6-209ENST00000623073 DZIP1Q86YF9 867 aaKnown RBP7.24□□□□□ -1.25
ERCC6-209ENST00000623073 TEX14Q8IWB6 1497 aa7.24□□□□□ -1.25
ERCC6-209ENST00000623073 NBPF20Q3BBV1 942 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms