RNA–Protein interactions for RNA: ENST00000622171.1

LINC00649-219, long intergenic non-protein coding RNA 649, human

TSL 5

Gene LINC00649, Length 207 nt, Biotype antisense RNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00649-219	ENST00000622171	NEXN	Q0ZGT2	675 aa		5.7	□□□□□ -1.5
LINC00649-219	ENST00000622171	CCDC27	Q2M243	656 aa		5.7	□□□□□ -1.5
LINC00649-219	ENST00000622171	CCDC152	Q4G0S7	254 aa		5.7	□□□□□ -1.5
LINC00649-219	ENST00000622171	SAMD7	Q7Z3H4	446 aa		5.7	□□□□□ -1.5
LINC00649-219	ENST00000622171	TXNRD3	Q86VQ6	643 aa		5.7	□□□□□ -1.5
LINC00649-219	ENST00000622171	SP8	Q8IXZ3	490 aa		5.7	□□□□□ -1.5
LINC00649-219	ENST00000622171	MICALL2	Q8IY33	904 aa		5.7	□□□□□ -1.5
LINC00649-219	ENST00000622171	TBC1D16	Q8TBP0	767 aa		5.7	□□□□□ -1.5
LINC00649-219	ENST00000622171	TSKS	Q9UJT2	592 aa		5.7	□□□□□ -1.5
LINC00649-219	ENST00000622171	ARAP2	Q8WZ64	1704 aa		5.7	□□□□□ -1.5
LINC00649-219	ENST00000622171	IL16	Q14005	1332 aa		5.7	□□□□□ -1.5
LINC00649-219	ENST00000622171	AK9	Q5TCS8	1911 aa		5.7	□□□□□ -1.5
LINC00649-219	ENST00000622171	ADM5	C9JUS6	153 aa		5.69	□□□□□ -1.5
LINC00649-219	ENST00000622171		G3V3G9	751 aa		5.69	□□□□□ -1.5
LINC00649-219	ENST00000622171	RGL2	O15211	777 aa		5.69	□□□□□ -1.5
LINC00649-219	ENST00000622171	BBOX1	O75936	387 aa		5.69	□□□□□ -1.5
LINC00649-219	ENST00000622171	ITGA6	P23229	1130 aa		5.69	□□□□□ -1.5
LINC00649-219	ENST00000622171	HIRA	P54198	1017 aa	Predicted RBP	5.69	□□□□□ -1.5
LINC00649-219	ENST00000622171	RPS8	P62241	208 aa	Known RBP	5.69	□□□□□ -1.5
LINC00649-219	ENST00000622171	KIAA2012	Q0VF49	1180 aa		5.69	□□□□□ -1.5
LINC00649-219	ENST00000622171	FSTL1	Q12841	308 aa		5.69	□□□□□ -1.5
LINC00649-219	ENST00000622171	GCKR	Q14397	625 aa		5.69	□□□□□ -1.5
LINC00649-219	ENST00000622171	SF3B3	Q15393	1217 aa	Known RBP	5.69	□□□□□ -1.5
LINC00649-219	ENST00000622171	WASHC4	Q2M389	1173 aa		5.69	□□□□□ -1.5
LINC00649-219	ENST00000622171	DCAF8	Q5TAQ9	597 aa		5.69	□□□□□ -1.5
LINC00649-219	ENST00000622171	CIAPIN1	Q6FI81	312 aa		5.69	□□□□□ -1.5
LINC00649-219	ENST00000622171	LDHD	Q86WU2	507 aa		5.69	□□□□□ -1.5
LINC00649-219	ENST00000622171	ANKRD18A	Q8IVF6	992 aa		5.69	□□□□□ -1.5
LINC00649-219	ENST00000622171	WDR63	Q8IWG1	891 aa		5.69	□□□□□ -1.5
LINC00649-219	ENST00000622171	GPC2	Q8N158	579 aa		5.69	□□□□□ -1.5
LINC00649-219	ENST00000622171	DNAJC5G	Q8N7S2	189 aa		5.69	□□□□□ -1.5
LINC00649-219	ENST00000622171	CCDC191	Q8NCU4	936 aa		5.69	□□□□□ -1.5
LINC00649-219	ENST00000622171	TTLL11	Q8NHH1	800 aa		5.69	□□□□□ -1.5
LINC00649-219	ENST00000622171	KLHDC4	Q8TBB5	520 aa		5.69	□□□□□ -1.5
LINC00649-219	ENST00000622171	SSH1	Q8WYL5	1049 aa		5.69	□□□□□ -1.5
LINC00649-219	ENST00000622171	KLRG1	Q96E93	195 aa		5.69	□□□□□ -1.5
LINC00649-219	ENST00000622171	SUCLG2	Q96I99	432 aa		5.69	□□□□□ -1.5
LINC00649-219	ENST00000622171	L3MBTL3	Q96JM7	780 aa	Predicted RBP	5.69	□□□□□ -1.5
LINC00649-219	ENST00000622171	MYH16	Q9H6N6	1097 aa		5.69	□□□□□ -1.5
LINC00649-219	ENST00000622171	GGA1	Q9UJY5	639 aa		5.69	□□□□□ -1.5
LINC00649-219	ENST00000622171	ZNRF3	Q9ULT6	936 aa		5.69	□□□□□ -1.5
LINC00649-219	ENST00000622171	ABT1	Q9ULW3	272 aa	Known RBP	5.69	□□□□□ -1.5
LINC00649-219	ENST00000622171	PCDHAC2	Q9Y5I4	1007 aa		5.69	□□□□□ -1.5
LINC00649-219	ENST00000622171	OTOF	Q9HC10	1997 aa		5.69	□□□□□ -1.5
LINC00649-219	ENST00000622171	ZNF521	Q96K83	1311 aa		5.69	□□□□□ -1.5
LINC00649-219	ENST00000622171	MYO5A	Q9Y4I1	1855 aa	Known RBP	5.68	□□□□□ -1.5
LINC00649-219	ENST00000622171	IQCA1L	A6NCM1	817 aa		5.68	□□□□□ -1.5
LINC00649-219	ENST00000622171		F8W031	263 aa	Predicted RBP	5.68	□□□□□ -1.5
LINC00649-219	ENST00000622171	SASH1	O94885	1247 aa		5.68	□□□□□ -1.5
LINC00649-219	ENST00000622171	HSPA1A	P0DMV8	641 aa	Known RBP	5.68	□□□□□ -1.5
LINC00649-219	ENST00000622171	HSPA1B	P0DMV9	641 aa	Known RBP	5.68	□□□□□ -1.5
LINC00649-219	ENST00000622171	CASP7	P55210	303 aa		5.68	□□□□□ -1.5
LINC00649-219	ENST00000622171	BEND3	Q5T5X7	828 aa		5.68	□□□□□ -1.5
LINC00649-219	ENST00000622171	PRAMEF18	Q5VWM3	479 aa		5.68	□□□□□ -1.5
LINC00649-219	ENST00000622171	LMBR1L	Q6UX01	489 aa		5.68	□□□□□ -1.5
LINC00649-219	ENST00000622171	CNTROB	Q8N137	903 aa		5.68	□□□□□ -1.5
LINC00649-219	ENST00000622171	MRPL50	Q8N5N7	158 aa	Known RBP	5.68	□□□□□ -1.5
LINC00649-219	ENST00000622171	PUS3	Q9BZE2	481 aa	Known RBP	5.68	□□□□□ -1.5
LINC00649-219	ENST00000622171	SMC4	Q9NTJ3	1288 aa		5.68	□□□□□ -1.5
LINC00649-219	ENST00000622171	GPRC5D	Q9NZD1	345 aa		5.68	□□□□□ -1.5
LINC00649-219	ENST00000622171	FZD1	Q9UP38	647 aa		5.68	□□□□□ -1.5
LINC00649-219	ENST00000622171	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	5.68	□□□□□ -1.5
LINC00649-219	ENST00000622171	PASK	Q96RG2	1323 aa		5.68	□□□□□ -1.5
LINC00649-219	ENST00000622171	CDHR2	Q9BYE9	1310 aa		5.68	□□□□□ -1.5
LINC00649-219	ENST00000622171	AKAP11	Q9UKA4	1901 aa		5.68	□□□□□ -1.5
LINC00649-219	ENST00000622171	AOC2	O75106	756 aa		5.67	□□□□□ -1.5
LINC00649-219	ENST00000622171	CELF2	O95319	508 aa	Known RBP	5.67	□□□□□ -1.5
LINC00649-219	ENST00000622171	ITGBL1	O95965	494 aa	Predicted RBP	5.67	□□□□□ -1.5
LINC00649-219	ENST00000622171	NBPF7	P0C2Y1	421 aa	Predicted RBP	5.67	□□□□□ -1.5
LINC00649-219	ENST00000622171	KCNJ4	P48050	445 aa		5.67	□□□□□ -1.5
LINC00649-219	ENST00000622171	VEGFB	P49765	207 aa		5.67	□□□□□ -1.5
LINC00649-219	ENST00000622171	FOXO4	P98177	505 aa		5.67	□□□□□ -1.5
LINC00649-219	ENST00000622171	HNRNPU	Q00839	825 aa	Known RBP eCLIP	5.67	□□□□□ -1.5
LINC00649-219	ENST00000622171	TRIM28	Q13263	835 aa	Known RBP	5.67	□□□□□ -1.5
LINC00649-219	ENST00000622171	COL13A1	Q5TAT6	717 aa	Predicted RBP	5.67	□□□□□ -1.5
LINC00649-219	ENST00000622171	DIEXF	Q68CQ4	756 aa	Known RBP	5.67	□□□□□ -1.5
LINC00649-219	ENST00000622171	CC2D2B	Q6DHV5	1058 aa		5.67	□□□□□ -1.5
LINC00649-219	ENST00000622171	CYP4F22	Q6NT55	531 aa		5.67	□□□□□ -1.5
LINC00649-219	ENST00000622171	USP48	Q86UV5	1035 aa		5.67	□□□□□ -1.5
LINC00649-219	ENST00000622171	SUPT20H	Q8NEM7	779 aa		5.67	□□□□□ -1.5
LINC00649-219	ENST00000622171	RTFDC1	Q9BY42	306 aa	Predicted RBP	5.67	□□□□□ -1.5
LINC00649-219	ENST00000622171	GGA3	Q9NZ52	723 aa		5.67	□□□□□ -1.5
LINC00649-219	ENST00000622171	C9orf78	Q9NZ63	289 aa	Predicted RBP	5.67	□□□□□ -1.5
LINC00649-219	ENST00000622171	CNOT7	Q9UIV1	285 aa	Known RBP	5.67	□□□□□ -1.5
LINC00649-219	ENST00000622171	MINPP1	Q9UNW1	487 aa		5.67	□□□□□ -1.5
LINC00649-219	ENST00000622171	XDH	P47989	1333 aa		5.67	□□□□□ -1.5
LINC00649-219	ENST00000622171	AOX1	Q06278	1338 aa		5.67	□□□□□ -1.5
LINC00649-219	ENST00000622171		H7C1W4	665 aa		5.66	□□□□□ -1.5
LINC00649-219	ENST00000622171	GRM8	O00222	908 aa		5.66	□□□□□ -1.5
LINC00649-219	ENST00000622171	IGHMBP2	P38935	993 aa	Known RBP	5.66	□□□□□ -1.5
LINC00649-219	ENST00000622171	CCT4	P50991	539 aa	Known RBP	5.66	□□□□□ -1.5
LINC00649-219	ENST00000622171	CHRND	Q07001	517 aa		5.66	□□□□□ -1.5
LINC00649-219	ENST00000622171	SLFN5	Q08AF3	891 aa		5.66	□□□□□ -1.5
LINC00649-219	ENST00000622171	PRKG1	Q13976	671 aa		5.66	□□□□□ -1.5
LINC00649-219	ENST00000622171	KIF4B	Q2VIQ3	1234 aa		5.66	□□□□□ -1.5
LINC00649-219	ENST00000622171	TAF7L	Q5H9L4	462 aa		5.66	□□□□□ -1.5
LINC00649-219	ENST00000622171	MOB2	Q70IA6	237 aa		5.66	□□□□□ -1.5
LINC00649-219	ENST00000622171	KIAA0825	Q8IV33	1275 aa		5.66	□□□□□ -1.5
LINC00649-219	ENST00000622171	LINS1	Q8NG48	757 aa		5.66	□□□□□ -1.5
LINC00649-219	ENST00000622171	KAZALD1	Q96I82	304 aa		5.66	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms