RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 PLA2G12BQ9BX93 195 aa11.21□□□□□ -0.61
PDPN-212ENST00000621990 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.21□□□□□ -0.61
PDPN-212ENST00000621990 HMGB1P09429 215 aaKnown RBP11.21□□□□□ -0.62
PDPN-212ENST00000621990 MCM5P33992 734 aa11.21□□□□□ -0.62
PDPN-212ENST00000621990 CCDC129Q6ZRS4 1044 aa11.21□□□□□ -0.62
PDPN-212ENST00000621990 TCEANC2Q96MN5 208 aa11.21□□□□□ -0.62
PDPN-212ENST00000621990 ANKRD36CQ5JPF3 1778 aa11.2□□□□□ -0.62
PDPN-212ENST00000621990 VPS37CA5D8V6 355 aaPredicted RBP11.2□□□□□ -0.62
PDPN-212ENST00000621990 ZNF500O60304 480 aaPredicted RBP11.2□□□□□ -0.62
PDPN-212ENST00000621990 LRRC24Q50LG9 513 aa11.2□□□□□ -0.62
PDPN-212ENST00000621990 TEX13AQ9BXU3 409 aaPredicted RBP11.2□□□□□ -0.62
PDPN-212ENST00000621990 AGXT2Q9BYV1 514 aa11.2□□□□□ -0.62
PDPN-212ENST00000621990 CHMP3Q9Y3E7 222 aa11.2□□□□□ -0.62
PDPN-212ENST00000621990 DISP2A7MBM2 1401 aa11.2□□□□□ -0.62
PDPN-212ENST00000621990 A0A1B0GUL7 405 aa11.2□□□□□ -0.62
PDPN-212ENST00000621990 TIMM10P62072 90 aa11.2□□□□□ -0.62
PDPN-212ENST00000621990 RNF214Q8ND24 703 aa11.2□□□□□ -0.62
PDPN-212ENST00000621990 TMOD3Q9NYL9 352 aa11.2□□□□□ -0.62
PDPN-212ENST00000621990 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.2□□□□□ -0.62
PDPN-212ENST00000621990 ABCC12Q96J65 1359 aa11.19□□□□□ -0.62
PDPN-212ENST00000621990 GOLIM4O00461 696 aa11.19□□□□□ -0.62
PDPN-212ENST00000621990 PCCAP05165 728 aaPredicted RBP11.19□□□□□ -0.62
PDPN-212ENST00000621990 KRT85P78386 507 aa11.19□□□□□ -0.62
PDPN-212ENST00000621990 STOX1Q6ZVD7 989 aa11.19□□□□□ -0.62
PDPN-212ENST00000621990 CCDC39Q9UFE4 941 aa11.19□□□□□ -0.62
PDPN-212ENST00000621990 DDX60Q8IY21 1712 aaKnown RBP11.19□□□□□ -0.62
PDPN-212ENST00000621990 ZNF335Q9H4Z2 1342 aaPredicted RBP11.19□□□□□ -0.62
PDPN-212ENST00000621990 MYH15Q9Y2K3 1946 aa11.19□□□□□ -0.62
PDPN-212ENST00000621990 CSF1RP07333 972 aa11.19□□□□□ -0.62
PDPN-212ENST00000621990 MSNP26038 577 aaKnown RBP11.19□□□□□ -0.62
PDPN-212ENST00000621990 NEUROD6Q96NK8 337 aa11.19□□□□□ -0.62
PDPN-212ENST00000621990 LLPHQ9BRT6 129 aaKnown RBP11.19□□□□□ -0.62
PDPN-212ENST00000621990 ZKSCAN5Q9Y2L8 839 aa11.19□□□□□ -0.62
PDPN-212ENST00000621990 EXOSC10Q01780 885 aaKnown RBP11.18□□□□□ -0.62
PDPN-212ENST00000621990 Q6ZUG5 572 aa11.18□□□□□ -0.62
PDPN-212ENST00000621990 TTC6Q86TZ1 520 aa11.18□□□□□ -0.62
PDPN-212ENST00000621990 FBXL16Q8N461 479 aa11.18□□□□□ -0.62
PDPN-212ENST00000621990 SMARCC2Q8TAQ2 1214 aa11.18□□□□□ -0.62
PDPN-212ENST00000621990 ZNF594Q96JF6 807 aaPredicted RBP11.18□□□□□ -0.62
PDPN-212ENST00000621990 COL14A1Q05707 1796 aaKnown RBP11.18□□□□□ -0.62
PDPN-212ENST00000621990 WNK3Q9BYP7 1800 aa11.18□□□□□ -0.62
PDPN-212ENST00000621990 MAST3O60307 1309 aa11.18□□□□□ -0.62
PDPN-212ENST00000621990 MYH3P11055 1940 aa11.18□□□□□ -0.62
PDPN-212ENST00000621990 RNF113AO15541 343 aaKnown RBP11.18□□□□□ -0.62
PDPN-212ENST00000621990 PFKFB2O60825 505 aa11.18□□□□□ -0.62
PDPN-212ENST00000621990 DTNBO60941 627 aa11.18□□□□□ -0.62
PDPN-212ENST00000621990 DHX32Q7L7V1 743 aaKnown RBP11.18□□□□□ -0.62
PDPN-212ENST00000621990 ZBTB38Q8NAP3 1195 aaPredicted RBP11.18□□□□□ -0.62
PDPN-212ENST00000621990 PIGBQ92521 554 aa11.18□□□□□ -0.62
PDPN-212ENST00000621990 PUS3Q9BZE2 481 aaKnown RBP11.18□□□□□ -0.62
PDPN-212ENST00000621990 SCAND2PQ9GZW5 306 aaPredicted RBP11.18□□□□□ -0.62
PDPN-212ENST00000621990 STRN4Q9NRL3 753 aa11.18□□□□□ -0.62
PDPN-212ENST00000621990 NWD2Q9ULI1 1742 aa11.18□□□□□ -0.62
PDPN-212ENST00000621990 MYH7P12883 1935 aa11.18□□□□□ -0.62
PDPN-212ENST00000621990 CDHR2Q9BYE9 1310 aa11.17□□□□□ -0.62
PDPN-212ENST00000621990 IFIT1P09914 478 aaKnown RBP11.17□□□□□ -0.62
PDPN-212ENST00000621990 HSPD1P10809 573 aaKnown RBP11.17□□□□□ -0.62
PDPN-212ENST00000621990 EVA1CP58658 441 aa11.17□□□□□ -0.62
PDPN-212ENST00000621990 BCL9O00512 1426 aa11.17□□□□□ -0.62
PDPN-212ENST00000621990 RIC1Q4ADV7 1423 aa11.17□□□□□ -0.62
PDPN-212ENST00000621990 OFD1O75665 1012 aa11.17□□□□□ -0.62
PDPN-212ENST00000621990 CCDC57Q2TAC2 916 aa11.17□□□□□ -0.62
PDPN-212ENST00000621990 CEP126Q9P2H0 1117 aa11.17□□□□□ -0.62
PDPN-212ENST00000621990 AKAP2Q9Y2D5 859 aa11.17□□□□□ -0.62
PDPN-212ENST00000621990 MAP3K15Q6ZN16 1313 aa11.17□□□□□ -0.62
PDPN-212ENST00000621990 SCRN1Q12765 414 aa11.16□□□□□ -0.62
PDPN-212ENST00000621990 KIF6Q6ZMV9 814 aa11.16□□□□□ -0.62
PDPN-212ENST00000621990 ASAP1Q9ULH1 1129 aa11.16□□□□□ -0.62
PDPN-212ENST00000621990 LRP5O75197 1615 aa11.16□□□□□ -0.62
PDPN-212ENST00000621990 COL22A1Q8NFW1 1626 aaPredicted RBP11.16□□□□□ -0.62
PDPN-212ENST00000621990 AKAP11Q9UKA4 1901 aa11.16□□□□□ -0.62
PDPN-212ENST00000621990 JAK2O60674 1132 aa11.16□□□□□ -0.62
PDPN-212ENST00000621990 STARD3NLO95772 234 aa11.16□□□□□ -0.62
PDPN-212ENST00000621990 RESTQ13127 1097 aa11.16□□□□□ -0.62
PDPN-212ENST00000621990 STK3Q13188 491 aa11.16□□□□□ -0.62
PDPN-212ENST00000621990 DNAJC10Q8IXB1 793 aa11.16□□□□□ -0.62
PDPN-212ENST00000621990 DNAJC5Q9H3Z4 198 aa11.16□□□□□ -0.62
PDPN-212ENST00000621990 SALL1Q9NSC2 1324 aa11.16□□□□□ -0.62
PDPN-212ENST00000621990 ZFYP08048 801 aaPredicted RBP11.15□□□□□ -0.62
PDPN-212ENST00000621990 EVCP57679 992 aa11.15□□□□□ -0.62
PDPN-212ENST00000621990 LRRFIP1Q32MZ4 808 aaKnown RBP11.15□□□□□ -0.62
PDPN-212ENST00000621990 SLFNL1Q499Z3 407 aa11.15□□□□□ -0.62
PDPN-212ENST00000621990 GIGYF2Q6Y7W6 1299 aaKnown RBP11.15□□□□□ -0.62
PDPN-212ENST00000621990 FERMT3Q86UX7 667 aa11.15□□□□□ -0.62
PDPN-212ENST00000621990 BRF1Q92994 677 aa11.15□□□□□ -0.62
PDPN-212ENST00000621990 E7EWF7 191 aa11.15□□□□□ -0.62
PDPN-212ENST00000621990 HCLS1P14317 486 aaPredicted RBP11.15□□□□□ -0.62
PDPN-212ENST00000621990 RBM43Q6ZSC3 357 aaKnown RBP11.15□□□□□ -0.62
PDPN-212ENST00000621990 LEO1Q8WVC0 666 aaPredicted RBP11.15□□□□□ -0.62
PDPN-212ENST00000621990 XAGE2Q96GT9 111 aa11.15□□□□□ -0.62
PDPN-212ENST00000621990 NAP1L5Q96NT1 182 aaPredicted RBP11.15□□□□□ -0.62
PDPN-212ENST00000621990 ZSCAN16Q9H4T2 348 aaPredicted RBP11.15□□□□□ -0.62
PDPN-212ENST00000621990 NUP98P52948 1817 aa11.15□□□□□ -0.63
PDPN-212ENST00000621990 M0R2C6 588 aa11.15□□□□□ -0.63
PDPN-212ENST00000621990 FOXP2O15409 715 aa11.15□□□□□ -0.63
PDPN-212ENST00000621990 CCDC158Q5M9N0 1113 aa11.15□□□□□ -0.63
PDPN-212ENST00000621990 NAA16Q6N069 864 aaPredicted RBP11.15□□□□□ -0.63
PDPN-212ENST00000621990 GIMAP6Q6P9H5 292 aa11.15□□□□□ -0.63
PDPN-212ENST00000621990 NSUN7Q8NE18 718 aaKnown RBP11.15□□□□□ -0.63
PDPN-212ENST00000621990 ZNF512BQ96KM6 892 aaPredicted RBP11.15□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms