RNA–Protein interactions for RNA: ENST00000621829.4

CLTC-215, Transcript of clathrin heavy chain, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLTC, Length 8,587 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-215ENST00000621829 RNASE9P60153 205 aaKnown RBP13.14□□□□□ -0.31
CLTC-215ENST00000621829 AMPD3Q01432 767 aa13.14□□□□□ -0.31
CLTC-215ENST00000621829 UBXN1Q04323 297 aa13.14□□□□□ -0.31
CLTC-215ENST00000621829 PPP1R7Q15435 360 aa13.14□□□□□ -0.31
CLTC-215ENST00000621829 TMEM132EQ6IEE7 984 aa13.14□□□□□ -0.31
CLTC-215ENST00000621829 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.14□□□□□ -0.317e-24■□□□□ 10.8
CLTC-215ENST00000621829 NKIRAS1Q9NYS0 192 aa13.14□□□□□ -0.31
CLTC-215ENST00000621829 GOLGA6BA6NDN3 693 aa13.14□□□□□ -0.31
CLTC-215ENST00000621829 GOLGA8AA7E2F4 631 aa13.14□□□□□ -0.31
CLTC-215ENST00000621829 UAP1Q16222 522 aaPredicted RBP13.14□□□□□ -0.31
CLTC-215ENST00000621829 RUFY3Q7L099 469 aa13.14□□□□□ -0.31
CLTC-215ENST00000621829 ABTB1Q969K4 478 aaPredicted RBP13.14□□□□□ -0.31
CLTC-215ENST00000621829 CCDC196A0A1B0GTZ2 297 aa13.14□□□□□ -0.31
CLTC-215ENST00000621829 SULT6B1Q6IMI4 303 aa13.14□□□□□ -0.31
CLTC-215ENST00000621829 RARSP54136 660 aaKnown RBP13.14□□□□□ -0.31
CLTC-215ENST00000621829 PHLDB2Q86SQ0 1253 aa13.14□□□□□ -0.31
CLTC-215ENST00000621829 MRRFQ96E11 262 aaKnown RBP13.14□□□□□ -0.31
CLTC-215ENST00000621829 LCA5Q86VQ0 697 aa13.14□□□□□ -0.31
CLTC-215ENST00000621829 BAG1Q99933 345 aaPredicted RBP13.14□□□□□ -0.31
CLTC-215ENST00000621829 RAB34Q9BZG1 259 aa13.14□□□□□ -0.31
CLTC-215ENST00000621829 DDX21Q9NR30 783 aaKnown RBP eCLIP13.14□□□□□ -0.318e-7■□□□□ 9.7
CLTC-215ENST00000621829 CARMIL2Q6F5E8 1435 aa13.14□□□□□ -0.31
CLTC-215ENST00000621829 TRMT1LQ7Z2T5 733 aaKnown RBP13.14□□□□□ -0.31
CLTC-215ENST00000621829 RTL1A6NKG5 1358 aa13.13□□□□□ -0.31
CLTC-215ENST00000621829 ZNF213O14771 459 aa13.13□□□□□ -0.31
CLTC-215ENST00000621829 WDHD1O75717 1129 aaPredicted RBP13.13□□□□□ -0.31
CLTC-215ENST00000621829 SESN3P58005 492 aa13.13□□□□□ -0.31
CLTC-215ENST00000621829 MPHOSPH8Q99549 860 aa13.13□□□□□ -0.31
CLTC-215ENST00000621829 PPANQ9NQ55 473 aaKnown RBP13.13□□□□□ -0.31
CLTC-215ENST00000621829 SYCP3Q8IZU3 236 aa13.13□□□□□ -0.31
CLTC-215ENST00000621829 CXorf38Q8TB03 319 aa13.13□□□□□ -0.31
CLTC-215ENST00000621829 XAB2Q9HCS7 855 aaKnown RBP13.13□□□□□ -0.31
CLTC-215ENST00000621829 MIS18AQ9NYP9 233 aa13.13□□□□□ -0.31
CLTC-215ENST00000621829 PPM1FP49593 454 aaPredicted RBP13.13□□□□□ -0.31
CLTC-215ENST00000621829 BRD2P25440 801 aaKnown RBP13.13□□□□□ -0.31
CLTC-215ENST00000621829 FYB2Q5VWT5 728 aa13.12□□□□□ -0.31
CLTC-215ENST00000621829 NLRP2Q9NX02 1062 aa13.12□□□□□ -0.31
CLTC-215ENST00000621829 USP16Q9Y5T5 823 aa13.12□□□□□ -0.31
CLTC-215ENST00000621829 TCP11L1Q9NUJ3 509 aa13.12□□□□□ -0.31
CLTC-215ENST00000621829 HSPA1LP34931 641 aa13.12□□□□□ -0.31
CLTC-215ENST00000621829 RBM5P52756 815 aaKnown RBP eCLIP13.12□□□□□ -0.31
CLTC-215ENST00000621829 E2F4Q16254 413 aa13.12□□□□□ -0.31
CLTC-215ENST00000621829 VSIG1Q86XK7 387 aa13.12□□□□□ -0.31
CLTC-215ENST00000621829 CCDC8Q9H0W5 538 aaPredicted RBP13.12□□□□□ -0.31
CLTC-215ENST00000621829 CCDC194A0A1B0GVG4 234 aa13.12□□□□□ -0.31
CLTC-215ENST00000621829 IFIT3O14879 490 aaKnown RBP13.12□□□□□ -0.31
CLTC-215ENST00000621829 RBM42Q9BTD8 480 aaKnown RBP13.12□□□□□ -0.31
CLTC-215ENST00000621829 MTRF1LQ9UGC7 380 aaKnown RBP13.12□□□□□ -0.31
CLTC-215ENST00000621829 ATP2A1O14983 1001 aa13.12□□□□□ -0.31
CLTC-215ENST00000621829 SSH1Q8WYL5 1049 aa13.12□□□□□ -0.31
CLTC-215ENST00000621829 CCDC42Q96M95 316 aa13.12□□□□□ -0.31
CLTC-215ENST00000621829 NAPBQ9H115 298 aa13.12□□□□□ -0.31
CLTC-215ENST00000621829 A0A087WZG4 1122 aa13.12□□□□□ -0.31
CLTC-215ENST00000621829 ZBTB17Q13105 803 aa13.12□□□□□ -0.31
CLTC-215ENST00000621829 SDCCAG8Q86SQ7 713 aaPredicted RBP13.12□□□□□ -0.31
CLTC-215ENST00000621829 ZNF622Q969S3 477 aaKnown RBP eCLIP13.12□□□□□ -0.31
CLTC-215ENST00000621829 SPAG5Q96R06 1193 aa13.12□□□□□ -0.31
CLTC-215ENST00000621829 TUBBP07437 444 aa13.12□□□□□ -0.31
CLTC-215ENST00000621829 CCDC62Q6P9F0 684 aa13.12□□□□□ -0.31
CLTC-215ENST00000621829 BICDL2A1A5D9 508 aa13.11□□□□□ -0.31
CLTC-215ENST00000621829 RANBP6O60518 1105 aaKnown RBP13.11□□□□□ -0.31
CLTC-215ENST00000621829 LRRC45Q96CN5 670 aa13.11□□□□□ -0.31
CLTC-215ENST00000621829 NUCKS1Q9H1E3 243 aaKnown RBP13.11□□□□□ -0.31
CLTC-215ENST00000621829 ORC3Q9UBD5 711 aaPredicted RBP13.11□□□□□ -0.31
CLTC-215ENST00000621829 ABCF2Q9UG63 623 aa13.11□□□□□ -0.31
CLTC-215ENST00000621829 FAF1Q9UNN5 650 aaPredicted RBP13.11□□□□□ -0.31
CLTC-215ENST00000621829 FCHSD2O94868 740 aa13.11□□□□□ -0.31
CLTC-215ENST00000621829 VPS41P49754 854 aa13.11□□□□□ -0.31
CLTC-215ENST00000621829 BMP2KLQ5H9B9 411 aa13.11□□□□□ -0.31
CLTC-215ENST00000621829 F13A1P00488 732 aa13.11□□□□□ -0.31
CLTC-215ENST00000621829 STAT6P42226 847 aa13.11□□□□□ -0.31
CLTC-215ENST00000621829 STX17P56962 302 aa13.11□□□□□ -0.31
CLTC-215ENST00000621829 SATB1Q01826 763 aa13.11□□□□□ -0.31
CLTC-215ENST00000621829 VPS52Q8N1B4 723 aa13.11□□□□□ -0.31
CLTC-215ENST00000621829 GDAP1L1Q96MZ0 367 aa13.11□□□□□ -0.31
CLTC-215ENST00000621829 SLC26A6Q9BXS9 759 aa13.11□□□□□ -0.31
CLTC-215ENST00000621829 SNCBQ16143 134 aa13.11□□□□□ -0.31
CLTC-215ENST00000621829 UTP14CQ5TAP6 766 aaKnown RBP13.11□□□□□ -0.31
CLTC-215ENST00000621829 TSGA10Q9BZW7 698 aa13.11□□□□□ -0.31
CLTC-215ENST00000621829 VEZTQ9HBM0 779 aa13.11□□□□□ -0.31
CLTC-215ENST00000621829 RMND1Q9NWS8 449 aa13.11□□□□□ -0.31
CLTC-215ENST00000621829 CEP126Q9P2H0 1117 aa13.11□□□□□ -0.31
CLTC-215ENST00000621829 UBA7P41226 1012 aa13.11□□□□□ -0.31
CLTC-215ENST00000621829 PIK3R5Q8WYR1 880 aa13.11□□□□□ -0.31
CLTC-215ENST00000621829 NDC80O14777 642 aa13.11□□□□□ -0.31
CLTC-215ENST00000621829 TNNC1P63316 161 aa13.11□□□□□ -0.31
CLTC-215ENST00000621829 TMED1Q13445 227 aa13.11□□□□□ -0.31
CLTC-215ENST00000621829 MICU3Q86XE3 530 aa13.11□□□□□ -0.31
CLTC-215ENST00000621829 MRPS27Q92552 414 aaKnown RBP13.11□□□□□ -0.31
CLTC-215ENST00000621829 NAPGQ99747 312 aaPredicted RBP13.11□□□□□ -0.31
CLTC-215ENST00000621829 GPRASP1Q5JY77 1395 aa13.11□□□□□ -0.31
CLTC-215ENST00000621829 RASIP1Q5U651 963 aa13.1□□□□□ -0.31
CLTC-215ENST00000621829 ZSCAN29Q8IWY8 852 aaPredicted RBP13.1□□□□□ -0.31
CLTC-215ENST00000621829 FERMT1Q9BQL6 677 aa13.1□□□□□ -0.31
CLTC-215ENST00000621829 IRX5P78411 483 aaPredicted RBP13.1□□□□□ -0.31
CLTC-215ENST00000621829 C8orf34Q49A92 452 aa13.1□□□□□ -0.31
CLTC-215ENST00000621829 MGARPQ8TDB4 240 aa13.1□□□□□ -0.31
CLTC-215ENST00000621829 LRPPRCP42704 1394 aaKnown RBP13.1□□□□□ -0.31
CLTC-215ENST00000621829 CLTAP09496 248 aa13.1□□□□□ -0.31
CLTC-215ENST00000621829 EEF2P13639 858 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms