RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 SOGA3Q5TF21 947 aa9.69□□□□□ -0.86
PTPDC1-204ENST00000620992 XAGE3Q8WTP9 111 aa9.69□□□□□ -0.86
PTPDC1-204ENST00000620992 TRIM5Q9C035 493 aa9.69□□□□□ -0.86
PTPDC1-204ENST00000620992 NPHP3Q7Z494 1330 aa9.69□□□□□ -0.86
PTPDC1-204ENST00000620992 ZNF76P36508 570 aa9.69□□□□□ -0.86
PTPDC1-204ENST00000620992 CCT2P78371 535 aaKnown RBP9.69□□□□□ -0.86
PTPDC1-204ENST00000620992 DNM1Q05193 864 aaKnown RBP9.69□□□□□ -0.86
PTPDC1-204ENST00000620992 ADCK5Q3MIX3 580 aa9.69□□□□□ -0.86
PTPDC1-204ENST00000620992 AMOTQ4VCS5 1084 aa9.69□□□□□ -0.86
PTPDC1-204ENST00000620992 GIMAP6Q6P9H5 292 aa9.69□□□□□ -0.86
PTPDC1-204ENST00000620992 DDX46Q7L014 1031 aaKnown RBP9.69□□□□□ -0.86
PTPDC1-204ENST00000620992 FAM177A1Q8N128 213 aaPredicted RBP9.69□□□□□ -0.86
PTPDC1-204ENST00000620992 BTG4Q9NY30 223 aa9.69□□□□□ -0.86
PTPDC1-204ENST00000620992 F13A1P00488 732 aa9.68□□□□□ -0.86
PTPDC1-204ENST00000620992 PROSER3Q2NL68 480 aa9.68□□□□□ -0.86
PTPDC1-204ENST00000620992 HSP90AB3PQ58FF7 597 aa9.68□□□□□ -0.86
PTPDC1-204ENST00000620992 ZCRB1Q8TBF4 217 aaKnown RBP9.68□□□□□ -0.86
PTPDC1-204ENST00000620992 PKNOX2Q96KN3 472 aa9.68□□□□□ -0.86
PTPDC1-204ENST00000620992 NAPBQ9H115 298 aa9.68□□□□□ -0.86
PTPDC1-204ENST00000620992 PRAMEF22A3QJZ6 481 aa9.68□□□□□ -0.86
PTPDC1-204ENST00000620992 SMC2O95347 1197 aa9.68□□□□□ -0.86
PTPDC1-204ENST00000620992 IP6K1Q92551 441 aa9.68□□□□□ -0.86
PTPDC1-204ENST00000620992 BABAM1Q9NWV8 329 aa9.68□□□□□ -0.86
PTPDC1-204ENST00000620992 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.68□□□□□ -0.86
PTPDC1-204ENST00000620992 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.68□□□□□ -0.86
PTPDC1-204ENST00000620992 ZNF500O60304 480 aaPredicted RBP9.68□□□□□ -0.86
PTPDC1-204ENST00000620992 UBE2HP62256 183 aa9.68□□□□□ -0.86
PTPDC1-204ENST00000620992 LRRC2Q9BYS8 371 aa9.68□□□□□ -0.86
PTPDC1-204ENST00000620992 HOOK1Q9UJC3 728 aaKnown RBP9.68□□□□□ -0.86
PTPDC1-204ENST00000620992 ADCY5O95622 1261 aa9.67□□□□□ -0.86
PTPDC1-204ENST00000620992 LIG1P18858 919 aa9.67□□□□□ -0.86
PTPDC1-204ENST00000620992 CCDC96Q2M329 555 aa9.67□□□□□ -0.86
PTPDC1-204ENST00000620992 ANKRD13DQ6ZTN6 518 aa9.67□□□□□ -0.86
PTPDC1-204ENST00000620992 TTC12Q9H892 705 aaPredicted RBP9.67□□□□□ -0.86
PTPDC1-204ENST00000620992 GCP02774 474 aa9.67□□□□□ -0.86
PTPDC1-204ENST00000620992 FAM227BQ96M60 508 aa9.67□□□□□ -0.86
PTPDC1-204ENST00000620992 FEZ1Q99689 392 aa9.67□□□□□ -0.86
PTPDC1-204ENST00000620992 PDCL3Q9H2J4 239 aa9.67□□□□□ -0.86
PTPDC1-204ENST00000620992 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.67□□□□□ -0.862e-7■■■■■ 93.2
PTPDC1-204ENST00000620992 CLEC11AQ9Y240 323 aa9.67□□□□□ -0.86
PTPDC1-204ENST00000620992 KLHDC4Q8TBB5 520 aa9.67□□□□□ -0.86
PTPDC1-204ENST00000620992 TTC14Q96N46 770 aa9.67□□□□□ -0.86
PTPDC1-204ENST00000620992 STX8Q9UNK0 236 aa9.67□□□□□ -0.86
PTPDC1-204ENST00000620992 RBM8AQ9Y5S9 174 aaKnown RBP9.67□□□□□ -0.86
PTPDC1-204ENST00000620992 UBR1Q8IWV7 1749 aa9.67□□□□□ -0.86
PTPDC1-204ENST00000620992 RPAP1Q9BWH6 1393 aaPredicted RBP9.67□□□□□ -0.86
PTPDC1-204ENST00000620992 TTC41PQ6P2S7 1318 aa9.67□□□□□ -0.86
PTPDC1-204ENST00000620992 AKAP4Q5JQC9 854 aa9.66□□□□□ -0.86
PTPDC1-204ENST00000620992 FAM173BQ6P4H8 233 aa9.66□□□□□ -0.86
PTPDC1-204ENST00000620992 NIP7Q9Y221 180 aaKnown RBP eCLIP9.66□□□□□ -0.86
PTPDC1-204ENST00000620992 RGPD1P0DJD0 1748 aa9.66□□□□□ -0.86
PTPDC1-204ENST00000620992 RIMBP2O15034 1052 aa9.66□□□□□ -0.86
PTPDC1-204ENST00000620992 C17orf53Q8N3J3 647 aaPredicted RBP9.66□□□□□ -0.86
PTPDC1-204ENST00000620992 TANGO6Q9C0B7 1094 aa9.66□□□□□ -0.86
PTPDC1-204ENST00000620992 HYPKQ9NX55 129 aa9.66□□□□□ -0.86
PTPDC1-204ENST00000620992 DIP2AQ14689 1571 aa9.66□□□□□ -0.86
PTPDC1-204ENST00000620992 ANKRD18BA2A2Z9 1011 aa9.66□□□□□ -0.86
PTPDC1-204ENST00000620992 MCM5P33992 734 aa9.66□□□□□ -0.86
PTPDC1-204ENST00000620992 LMBR1LQ6UX01 489 aa9.66□□□□□ -0.86
PTPDC1-204ENST00000620992 KSR2Q6VAB6 950 aa9.66□□□□□ -0.86
PTPDC1-204ENST00000620992 EVI5LQ96CN4 794 aa9.66□□□□□ -0.86
PTPDC1-204ENST00000620992 TCHHQ07283 1943 aa9.66□□□□□ -0.86
PTPDC1-204ENST00000620992 NMIQ13287 307 aaPredicted RBP9.66□□□□□ -0.86
PTPDC1-204ENST00000620992 ENOX2Q16206 610 aaKnown RBP9.66□□□□□ -0.86
PTPDC1-204ENST00000620992 CAMK4Q16566 473 aa9.66□□□□□ -0.86
PTPDC1-204ENST00000620992 OLFM4Q6UX06 510 aa9.66□□□□□ -0.86
PTPDC1-204ENST00000620992 RGPD8O14715 1765 aaPredicted RBP9.66□□□□□ -0.86
PTPDC1-204ENST00000620992 FAM98CQ17RN3 349 aaKnown RBP9.65□□□□□ -0.86
PTPDC1-204ENST00000620992 BICC1Q9H694 974 aaKnown RBP9.65□□□□□ -0.86
PTPDC1-204ENST00000620992 ME3Q16798 604 aa9.65□□□□□ -0.86
PTPDC1-204ENST00000620992 CCDC171Q6TFL3 1326 aa9.65□□□□□ -0.86
PTPDC1-204ENST00000620992 ADCY9O60503 1353 aa9.65□□□□□ -0.86
PTPDC1-204ENST00000620992 GRM8O00222 908 aa9.65□□□□□ -0.87
PTPDC1-204ENST00000620992 RNMTO43148 476 aaKnown RBP9.65□□□□□ -0.87
PTPDC1-204ENST00000620992 EPB41L2O43491 1005 aaKnown RBP9.65□□□□□ -0.87
PTPDC1-204ENST00000620992 LETM1O95202 739 aaPredicted RBP9.65□□□□□ -0.87
PTPDC1-204ENST00000620992 CREB3L3Q68CJ9 461 aa9.65□□□□□ -0.87
PTPDC1-204ENST00000620992 KLHL10Q6JEL2 608 aa9.65□□□□□ -0.87
PTPDC1-204ENST00000620992 GOLGA6L1Q8N7Z2 621 aa9.65□□□□□ -0.87
PTPDC1-204ENST00000620992 SUCLG2Q96I99 432 aa9.65□□□□□ -0.87
PTPDC1-204ENST00000620992 ZSCAN31Q96LW9 406 aaPredicted RBP9.65□□□□□ -0.87
PTPDC1-204ENST00000620992 HIP1O00291 1037 aa9.64□□□□□ -0.87
PTPDC1-204ENST00000620992 HOXB7P09629 217 aa9.64□□□□□ -0.87
PTPDC1-204ENST00000620992 PDCP20941 246 aa9.64□□□□□ -0.87
PTPDC1-204ENST00000620992 SH2B1Q9NRF2 756 aaPredicted RBP9.64□□□□□ -0.87
PTPDC1-204ENST00000620992 TFIP11Q9UBB9 837 aaKnown RBP9.64□□□□□ -0.87
PTPDC1-204ENST00000620992 FMN2Q9NZ56 1722 aa9.64□□□□□ -0.87
PTPDC1-204ENST00000620992 EAF2Q96CJ1 260 aaPredicted RBP9.64□□□□□ -0.87
PTPDC1-204ENST00000620992 TLR7Q9NYK1 1049 aaKnown RBP9.64□□□□□ -0.87
PTPDC1-204ENST00000620992 MTMR6Q9Y217 621 aa9.64□□□□□ -0.87
PTPDC1-204ENST00000620992 GIGYF1O75420 1035 aaPredicted RBP9.64□□□□□ -0.87
PTPDC1-204ENST00000620992 SNRPA1P09661 255 aaKnown RBP9.64□□□□□ -0.87
PTPDC1-204ENST00000620992 TXLNAP40222 546 aa9.64□□□□□ -0.87
PTPDC1-204ENST00000620992 PICALMQ13492 652 aa9.64□□□□□ -0.87
PTPDC1-204ENST00000620992 FILIP1Q7Z7B0 1213 aa9.64□□□□□ -0.87
PTPDC1-204ENST00000620992 MICU3Q86XE3 530 aa9.64□□□□□ -0.87
PTPDC1-204ENST00000620992 EDC3Q96F86 508 aaKnown RBP9.64□□□□□ -0.87
PTPDC1-204ENST00000620992 SETDB2Q96T68 719 aa9.64□□□□□ -0.87
PTPDC1-204ENST00000620992 UBA5Q9GZZ9 404 aa9.64□□□□□ -0.87
PTPDC1-204ENST00000620992 NALCNQ8IZF0 1738 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms