RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 TSGA10Q9BZW7 698 aa8.16□□□□□ -1.1
COLCA1-205ENST00000620864 VCX3AQ9NNX9 186 aa8.16□□□□□ -1.1
COLCA1-205ENST00000620864 SEC63Q9UGP8 760 aaKnown RBP8.16□□□□□ -1.1
COLCA1-205ENST00000620864 LUC7L3O95232 432 aaKnown RBP8.16□□□□□ -1.1
COLCA1-205ENST00000620864 CCDC40Q4G0X9 1142 aa8.16□□□□□ -1.1
COLCA1-205ENST00000620864 MAP3K21Q5TCX8 1036 aa8.16□□□□□ -1.1
COLCA1-205ENST00000620864 JAKMIP1Q96N16 626 aaKnown RBP8.16□□□□□ -1.1
COLCA1-205ENST00000620864 ZSCAN16Q9H4T2 348 aaPredicted RBP8.16□□□□□ -1.1
COLCA1-205ENST00000620864 APBA3O96018 575 aa8.16□□□□□ -1.1
COLCA1-205ENST00000620864 VAV2P52735 878 aa8.16□□□□□ -1.1
COLCA1-205ENST00000620864 RRS1Q15050 365 aaKnown RBP8.16□□□□□ -1.1
COLCA1-205ENST00000620864 TBC1D5Q92609 795 aa8.16□□□□□ -1.1
COLCA1-205ENST00000620864 MYCBPQ99417 103 aaPredicted RBP8.16□□□□□ -1.1
COLCA1-205ENST00000620864 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.16□□□□□ -1.1
COLCA1-205ENST00000620864 THEGQ9P2T0 379 aa8.16□□□□□ -1.1
COLCA1-205ENST00000620864 MTRF1LQ9UGC7 380 aaKnown RBP8.16□□□□□ -1.1
COLCA1-205ENST00000620864 MGEA5O60502 916 aa8.16□□□□□ -1.1
COLCA1-205ENST00000620864 DNAJC8O75937 253 aaPredicted RBP8.16□□□□□ -1.1
COLCA1-205ENST00000620864 CLNS1AP54105 237 aaKnown RBP8.16□□□□□ -1.1
COLCA1-205ENST00000620864 PRKG1Q13976 671 aa8.16□□□□□ -1.1
COLCA1-205ENST00000620864 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.16□□□□□ -1.1
COLCA1-205ENST00000620864 PCK1P35558 622 aa8.15□□□□□ -1.1
COLCA1-205ENST00000620864 ATAD2Q6PL18 1390 aa8.15□□□□□ -1.1
COLCA1-205ENST00000620864 PRC1O43663 620 aa8.15□□□□□ -1.1
COLCA1-205ENST00000620864 TMC6Q7Z403 805 aa8.15□□□□□ -1.1
COLCA1-205ENST00000620864 UNC13AQ9UPW8 1703 aa8.15□□□□□ -1.1
COLCA1-205ENST00000620864 CRACR2BQ8N4Y2 399 aaPredicted RBP8.15□□□□□ -1.1
COLCA1-205ENST00000620864 CNNM3Q8NE01 707 aa8.15□□□□□ -1.1
COLCA1-205ENST00000620864 CABLES1Q8TDN4 633 aa8.15□□□□□ -1.1
COLCA1-205ENST00000620864 KIF14Q15058 1648 aa8.15□□□□□ -1.1
COLCA1-205ENST00000620864 AP1ARQ63HQ0 302 aa8.15□□□□□ -1.1
COLCA1-205ENST00000620864 INTS8Q75QN2 995 aaKnown RBP8.15□□□□□ -1.1
COLCA1-205ENST00000620864 NPHP3Q7Z494 1330 aa8.15□□□□□ -1.11
COLCA1-205ENST00000620864 RFC1P35251 1148 aaPredicted RBP8.15□□□□□ -1.11
COLCA1-205ENST00000620864 USP5P45974 858 aa8.15□□□□□ -1.11
COLCA1-205ENST00000620864 NOLC1Q14978 699 aaKnown RBP eCLIP8.15□□□□□ -1.11
COLCA1-205ENST00000620864 LRSAM1Q6UWE0 723 aa8.15□□□□□ -1.11
COLCA1-205ENST00000620864 SECISBP2LQ93073 1101 aaKnown RBP8.15□□□□□ -1.11
COLCA1-205ENST00000620864 MTUS1Q9ULD2 1270 aa8.15□□□□□ -1.11
COLCA1-205ENST00000620864 TRIM35Q9UPQ4 493 aa8.15□□□□□ -1.11
COLCA1-205ENST00000620864 KRT86O43790 486 aa8.15□□□□□ -1.11
COLCA1-205ENST00000620864 SSBP05455 408 aaKnown RBP eCLIP8.15□□□□□ -1.11
COLCA1-205ENST00000620864 RASSF2P50749 326 aa8.15□□□□□ -1.11
COLCA1-205ENST00000620864 DDB1Q16531 1140 aa8.15□□□□□ -1.11
COLCA1-205ENST00000620864 ATF7IPQ6VMQ6 1270 aa8.15□□□□□ -1.11
COLCA1-205ENST00000620864 ZMAT2Q96NC0 199 aaKnown RBP8.15□□□□□ -1.11
COLCA1-205ENST00000620864 SPAG5Q96R06 1193 aa8.15□□□□□ -1.11
COLCA1-205ENST00000620864 FYB2Q5VWT5 728 aa8.14□□□□□ -1.11
COLCA1-205ENST00000620864 NUF2Q9BZD4 464 aa8.14□□□□□ -1.11
COLCA1-205ENST00000620864 ANKIB1Q9P2G1 1089 aa8.14□□□□□ -1.11
COLCA1-205ENST00000620864 CASKIN1Q8WXD9 1431 aa8.14□□□□□ -1.11
COLCA1-205ENST00000620864 MTIF2P46199 727 aaKnown RBP8.14□□□□□ -1.11
COLCA1-205ENST00000620864 NEDD9Q14511 834 aa8.14□□□□□ -1.11
COLCA1-205ENST00000620864 SULT6B1Q6IMI4 303 aa8.14□□□□□ -1.11
COLCA1-205ENST00000620864 C8orf76Q96K31 380 aa8.14□□□□□ -1.11
COLCA1-205ENST00000620864 SEC62Q99442 399 aaKnown RBP8.14□□□□□ -1.11
COLCA1-205ENST00000620864 ZKSCAN5Q9Y2L8 839 aa8.14□□□□□ -1.11
COLCA1-205ENST00000620864 MAP2K2P36507 400 aa8.14□□□□□ -1.11
COLCA1-205ENST00000620864 ST5P78524 1137 aa8.14□□□□□ -1.11
COLCA1-205ENST00000620864 RBBP5Q15291 538 aaKnown RBP8.14□□□□□ -1.11
COLCA1-205ENST00000620864 LARSQ9P2J5 1176 aaKnown RBP8.14□□□□□ -1.11
COLCA1-205ENST00000620864 FAN1Q9Y2M0 1017 aa8.14□□□□□ -1.11
COLCA1-205ENST00000620864 PARP3Q9Y6F1 533 aa8.14□□□□□ -1.11
COLCA1-205ENST00000620864 BUB1BO60566 1050 aaPredicted RBP8.14□□□□□ -1.11
COLCA1-205ENST00000620864 ZNF165P49910 485 aa8.14□□□□□ -1.11
COLCA1-205ENST00000620864 CALML4Q96GE6 196 aa8.14□□□□□ -1.11
COLCA1-205ENST00000620864 PPP1R9BQ96SB3 815 aa8.13□□□□□ -1.11
COLCA1-205ENST00000620864 NCAPGQ9BPX3 1015 aa8.13□□□□□ -1.11
COLCA1-205ENST00000620864 LIMCH1Q9UPQ0 1083 aa8.13□□□□□ -1.11
COLCA1-205ENST00000620864 BTBD11A6QL63 1104 aa8.13□□□□□ -1.11
COLCA1-205ENST00000620864 AFAP1L2Q8N4X5 818 aa8.13□□□□□ -1.11
COLCA1-205ENST00000620864 GLRX3O76003 335 aaKnown RBP8.13□□□□□ -1.11
COLCA1-205ENST00000620864 INPP5BP32019 993 aa8.13□□□□□ -1.11
COLCA1-205ENST00000620864 TNNC1P63316 161 aa8.13□□□□□ -1.11
COLCA1-205ENST00000620864 STK3Q13188 491 aa8.13□□□□□ -1.11
COLCA1-205ENST00000620864 TWISTNBQ3B726 338 aaPredicted RBP8.13□□□□□ -1.11
COLCA1-205ENST00000620864 CCDC85AQ96PX6 553 aaPredicted RBP8.13□□□□□ -1.11
COLCA1-205ENST00000620864 CFAP58Q5T655 872 aa8.13□□□□□ -1.11
COLCA1-205ENST00000620864 MIER3Q7Z3K6 550 aa8.13□□□□□ -1.11
COLCA1-205ENST00000620864 HVCN1Q96D96 273 aa8.13□□□□□ -1.11
COLCA1-205ENST00000620864 EIF2AQ9BY44 585 aaKnown RBP8.13□□□□□ -1.11
COLCA1-205ENST00000620864 QTRT2Q9H974 415 aaKnown RBP8.13□□□□□ -1.11
COLCA1-205ENST00000620864 NKIRAS1Q9NYS0 192 aa8.13□□□□□ -1.11
COLCA1-205ENST00000620864 BAG4O95429 457 aaKnown RBP8.13□□□□□ -1.11
COLCA1-205ENST00000620864 PSMC4P43686 418 aa8.13□□□□□ -1.11
COLCA1-205ENST00000620864 RNF41Q9H4P4 317 aaPredicted RBP8.13□□□□□ -1.11
COLCA1-205ENST00000620864 RBM27Q9P2N5 1060 aaKnown RBP8.13□□□□□ -1.11
COLCA1-205ENST00000620864 GRIN3BO60391 1043 aa8.13□□□□□ -1.11
COLCA1-205ENST00000620864 SLC8A1P32418 973 aa8.13□□□□□ -1.11
COLCA1-205ENST00000620864 IDI1Q13907 227 aa8.13□□□□□ -1.11
COLCA1-205ENST00000620864 LRCH2Q5VUJ6 765 aa8.13□□□□□ -1.11
COLCA1-205ENST00000620864 GABPB2Q8TAK5 448 aaPredicted RBP8.13□□□□□ -1.11
COLCA1-205ENST00000620864 PPFIA1Q13136 1202 aa8.12□□□□□ -1.11
COLCA1-205ENST00000620864 HSP90AA5PQ58FG0 334 aa8.12□□□□□ -1.11
COLCA1-205ENST00000620864 SMC1BQ8NDV3 1235 aa8.12□□□□□ -1.11
COLCA1-205ENST00000620864 Q9H521 79 aa8.12□□□□□ -1.11
COLCA1-205ENST00000620864 TCP11L1Q9NUJ3 509 aa8.12□□□□□ -1.11
COLCA1-205ENST00000620864 AFAP1L1Q8TED9 768 aa8.12□□□□□ -1.11
COLCA1-205ENST00000620864 FGD6Q6ZV73 1430 aa8.12□□□□□ -1.11
COLCA1-205ENST00000620864 C6orf229H3BNL8 230 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms