RNA–Protein interactions for RNA: ENST00000620394.1

SRRT-218, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-218ENST00000620394 SAMD7Q7Z3H4 446 aa28.45■■■□□ 2.14
SRRT-218ENST00000620394 KRT26Q7Z3Y9 468 aa28.45■■■□□ 2.14
SRRT-218ENST00000620394 SAGE1Q9NXZ1 904 aa28.45■■■□□ 2.14
SRRT-218ENST00000620394 AKAP11Q9UKA4 1901 aa28.45■■■□□ 2.14
SRRT-218ENST00000620394 RGMBQ6NW40 437 aa28.44■■■□□ 2.14
SRRT-218ENST00000620394 RIC3Q7Z5B4 369 aa28.44■■■□□ 2.14
SRRT-218ENST00000620394 ZNF428Q96B54 188 aa28.44■■■□□ 2.14
SRRT-218ENST00000620394 ZIC5Q96T25 663 aa28.44■■■□□ 2.14
SRRT-218ENST00000620394 DBNDD1Q9H9R9 158 aa28.44■■■□□ 2.14
SRRT-218ENST00000620394 GBA2Q9HCG7 927 aaPredicted RBP28.44■■■□□ 2.14
SRRT-218ENST00000620394 CCDC30Q5VVM6 783 aa28.43■■■□□ 2.14
SRRT-218ENST00000620394 WWC1Q8IX03 1113 aa28.43■■■□□ 2.14
SRRT-218ENST00000620394 TSPYL6Q8N831 410 aa28.43■■■□□ 2.14
SRRT-218ENST00000620394 NSFL1CQ9UNZ2 370 aaKnown RBP28.43■■■□□ 2.14
SRRT-218ENST00000620394 FAM155AB1AL88 458 aaPredicted RBP28.42■■■□□ 2.14
SRRT-218ENST00000620394 TBC1D10BQ4KMP7 808 aaPredicted RBP28.42■■■□□ 2.14
SRRT-218ENST00000620394 DCPSQ96C86 337 aaKnown RBP28.42■■■□□ 2.14
SRRT-218ENST00000620394 IL16Q14005 1332 aa28.42■■■□□ 2.14
SRRT-218ENST00000620394 ZNF316A6NFI3 1004 aaPredicted RBP28.41■■■□□ 2.14
SRRT-218ENST00000620394 IRS4O14654 1257 aaPredicted RBP28.41■■■□□ 2.14
SRRT-218ENST00000620394 C2orf69Q8N8R5 385 aa28.41■■■□□ 2.14
SRRT-218ENST00000620394 ZBTB38Q8NAP3 1195 aaPredicted RBP28.41■■■□□ 2.14
SRRT-218ENST00000620394 CELF1Q92879 486 aaKnown RBP28.41■■■□□ 2.14
SRRT-218ENST00000620394 CCDC102AQ96A19 550 aa28.41■■■□□ 2.14
SRRT-218ENST00000620394 EYA3Q99504 573 aa28.41■■■□□ 2.14
SRRT-218ENST00000620394 SCN9AQ15858 1988 aa28.41■■■□□ 2.14
SRRT-218ENST00000620394 ECE2O60344 883 aa28.4■■■□□ 2.14
SRRT-218ENST00000620394 CCDC191Q8NCU4 936 aa28.4■■■□□ 2.14
SRRT-218ENST00000620394 TSR2Q969E8 191 aaKnown RBP28.4■■■□□ 2.14
SRRT-218ENST00000620394 MRS2Q9HD23 443 aa28.4■■■□□ 2.14
SRRT-218ENST00000620394 RTL9Q8NET4 1388 aa28.39■■■□□ 2.14
SRRT-218ENST00000620394 PSME4Q14997 1843 aa28.39■■■□□ 2.14
SRRT-218ENST00000620394 CACNA1FO60840 1977 aa28.39■■■□□ 2.14
SRRT-218ENST00000620394 C6orf229H3BNL8 230 aa28.39■■■□□ 2.14
SRRT-218ENST00000620394 DLK2Q6UY11 383 aa28.39■■■□□ 2.14
SRRT-218ENST00000620394 ADM5C9JUS6 153 aa28.38■■■□□ 2.13
SRRT-218ENST00000620394 RIMBP2O15034 1052 aa28.38■■■□□ 2.13
SRRT-218ENST00000620394 DDX58O95786 925 aaKnown RBP28.38■■■□□ 2.13
SRRT-218ENST00000620394 EGFRP00533 1210 aa28.38■■■□□ 2.13
SRRT-218ENST00000620394 MYD88Q99836 296 aa28.38■■■□□ 2.13
SRRT-218ENST00000620394 METTL22Q9BUU2 404 aaPredicted RBP28.38■■■□□ 2.13
SRRT-218ENST00000620394 POLLQ9UGP5 575 aa28.38■■■□□ 2.13
SRRT-218ENST00000620394 MYH3P11055 1940 aa28.37■■■□□ 2.13
SRRT-218ENST00000620394 ZNF609O15014 1411 aa28.37■■■□□ 2.13
SRRT-218ENST00000620394 ANP32CO43423 234 aa28.37■■■□□ 2.13
SRRT-218ENST00000620394 GPSM2P81274 684 aa28.37■■■□□ 2.13
SRRT-218ENST00000620394 KIF4BQ2VIQ3 1234 aa28.37■■■□□ 2.13
SRRT-218ENST00000620394 RTL5Q5HYW3 569 aaPredicted RBP28.37■■■□□ 2.13
SRRT-218ENST00000620394 PCCAP05165 728 aaPredicted RBP28.36■■■□□ 2.13
SRRT-218ENST00000620394 HSP90B1P14625 803 aaKnown RBP28.36■■■□□ 2.13
SRRT-218ENST00000620394 ZNF157P51786 506 aaPredicted RBP28.36■■■□□ 2.13
SRRT-218ENST00000620394 KIF23Q02241 960 aaPredicted RBP28.35■■■□□ 2.13
SRRT-218ENST00000620394 SULF1Q8IWU6 871 aa28.35■■■□□ 2.13
SRRT-218ENST00000620394 CWC25Q9NXE8 425 aaPredicted RBP28.35■■■□□ 2.13
SRRT-218ENST00000620394 GGA3Q9NZ52 723 aa28.35■■■□□ 2.13
SRRT-218ENST00000620394 SLC10A3P09131 477 aa28.34■■■□□ 2.13
SRRT-218ENST00000620394 RBM26Q5T8P6 1007 aaKnown RBP28.34■■■□□ 2.13
SRRT-218ENST00000620394 TBC1D16Q8TBP0 767 aa28.34■■■□□ 2.13
SRRT-218ENST00000620394 PAPPA2Q9BXP8 1791 aa28.34■■■□□ 2.13
SRRT-218ENST00000620394 DOK7Q18PE1 504 aa28.33■■■□□ 2.13
SRRT-218ENST00000620394 TWISTNBQ3B726 338 aaPredicted RBP28.33■■■□□ 2.13
SRRT-218ENST00000620394 PCDH10Q9P2E7 1040 aa28.33■■■□□ 2.13
SRRT-218ENST00000620394 KSR2Q6VAB6 950 aa28.32■■■□□ 2.12
SRRT-218ENST00000620394 STK31Q9BXU1 1019 aa28.32■■■□□ 2.12
SRRT-218ENST00000620394 KCNQ5Q9NR82 932 aa28.32■■■□□ 2.12
SRRT-218ENST00000620394 RNF186Q9NXI6 227 aa28.32■■■□□ 2.12
SRRT-218ENST00000620394 MAP3K2Q9Y2U5 619 aa28.32■■■□□ 2.12
SRRT-218ENST00000620394 PDE4DIPQ5VU43 2346 aa28.32■■■□□ 2.12
SRRT-218ENST00000620394 VIL1P09327 827 aaKnown RBP28.31■■■□□ 2.12
SRRT-218ENST00000620394 RPS8P62241 208 aaKnown RBP28.31■■■□□ 2.12
SRRT-218ENST00000620394 PODXL2Q9NZ53 605 aa28.31■■■□□ 2.12
SRRT-218ENST00000620394 FANCIQ9NVI1 1328 aa28.31■■■□□ 2.12
SRRT-218ENST00000620394 PDE8AO60658 829 aa28.3■■■□□ 2.12
SRRT-218ENST00000620394 TRPA1O75762 1119 aa28.3■■■□□ 2.12
SRRT-218ENST00000620394 ZC3H12CQ9C0D7 883 aaKnown RBP28.3■■■□□ 2.12
SRRT-218ENST00000620394 PI4KAP2A4QPH2 592 aa28.29■■■□□ 2.12
SRRT-218ENST00000620394 IGKV5-2P06315 115 aa28.29■■■□□ 2.12
SRRT-218ENST00000620394 CCDC152Q4G0S7 254 aa28.29■■■□□ 2.12
SRRT-218ENST00000620394 REM2Q8IYK8 340 aaPredicted RBP28.29■■■□□ 2.12
SRRT-218ENST00000620394 PI4KAP1Q8N8J0 262 aa28.29■■■□□ 2.12
SRRT-218ENST00000620394 CDCA5Q96FF9 252 aa28.29■■■□□ 2.12
SRRT-218ENST00000620394 SEC31BQ9NQW1 1179 aa28.28■■■□□ 2.12
SRRT-218ENST00000620394 G3V3G9 751 aa28.27■■■□□ 2.12
SRRT-218ENST00000620394 UFL1O94874 794 aa28.27■■■□□ 2.12
SRRT-218ENST00000620394 DCAF8Q5TAQ9 597 aa28.27■■■□□ 2.12
SRRT-218ENST00000620394 WDR63Q8IWG1 891 aa28.27■■■□□ 2.12
SRRT-218ENST00000620394 TNRC18O15417 2968 aaPredicted RBP28.26■■■□□ 2.12
SRRT-218ENST00000620394 ZNF280AP59817 542 aaPredicted RBP28.26■■■□□ 2.11
SRRT-218ENST00000620394 FKBP1BP68106 108 aa28.26■■■□□ 2.11
SRRT-218ENST00000620394 RASAL3Q86YV0 1011 aa28.26■■■□□ 2.11
SRRT-218ENST00000620394 AGBL3Q8NEM8 1001 aa28.26■■■□□ 2.11
SRRT-218ENST00000620394 ANKIB1Q9P2G1 1089 aa28.26■■■□□ 2.11
SRRT-218ENST00000620394 GGA1Q9UJY5 639 aa28.26■■■□□ 2.11
SRRT-218ENST00000620394 SPEF2Q9C093 1822 aa28.26■■■□□ 2.11
SRRT-218ENST00000620394 SOX10P56693 466 aa28.25■■■□□ 2.11
SRRT-218ENST00000620394 G2E3Q7L622 706 aa28.25■■■□□ 2.11
SRRT-218ENST00000620394 CTU1Q7Z7A3 348 aaKnown RBP28.25■■■□□ 2.11
SRRT-218ENST00000620394 CSRNP1Q96S65 589 aa28.25■■■□□ 2.11
SRRT-218ENST00000620394 ASTN2O75129 1339 aaPredicted RBP28.24■■■□□ 2.11
SRRT-218ENST00000620394 NEXNQ0ZGT2 675 aa28.24■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms