RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 ATP2B3Q16720 1220 aa22.87■■□□□ 1.25
PSPC1-206ENST00000619300 NOL8Q76FK4 1167 aaKnown RBP22.87■■□□□ 1.25
PSPC1-206ENST00000619300 INTS4Q96HW7 963 aaKnown RBP22.87■■□□□ 1.25
PSPC1-206ENST00000619300 GBP4Q96PP9 640 aa22.87■■□□□ 1.25
PSPC1-206ENST00000619300 RIC1Q4ADV7 1423 aa22.87■■□□□ 1.25
PSPC1-206ENST00000619300 SLC27A2O14975 620 aa22.87■■□□□ 1.25
PSPC1-206ENST00000619300 NTSR2O95665 410 aa22.87■■□□□ 1.25
PSPC1-206ENST00000619300 SSFA2P28290 1259 aa22.87■■□□□ 1.25
PSPC1-206ENST00000619300 ADCK5Q3MIX3 580 aa22.87■■□□□ 1.25
PSPC1-206ENST00000619300 RNF20Q5VTR2 975 aa22.87■■□□□ 1.25
PSPC1-206ENST00000619300 JAKMIP1Q96N16 626 aaKnown RBP22.87■■□□□ 1.25
PSPC1-206ENST00000619300 ZSWIM6Q9HCJ5 1215 aa22.87■■□□□ 1.25
PSPC1-206ENST00000619300 AFF2P51816 1311 aa22.87■■□□□ 1.25
PSPC1-206ENST00000619300 COL5A3P25940 1745 aaPredicted RBP22.86■■□□□ 1.25
PSPC1-206ENST00000619300 CHGBP05060 677 aa22.86■■□□□ 1.25
PSPC1-206ENST00000619300 GSE1Q14687 1217 aa22.86■■□□□ 1.25
PSPC1-206ENST00000619300 RC3H1Q5TC82 1133 aaKnown RBP22.86■■□□□ 1.25
PSPC1-206ENST00000619300 VGLL2Q8N8G2 317 aa22.86■■□□□ 1.25
PSPC1-206ENST00000619300 DDX11L8A8MPP1 907 aa22.86■■□□□ 1.25
PSPC1-206ENST00000619300 ONECUT3O60422 494 aaPredicted RBP22.86■■□□□ 1.25
PSPC1-206ENST00000619300 FAM182BQ5T319 152 aa22.86■■□□□ 1.25
PSPC1-206ENST00000619300 AEBP2Q6ZN18 517 aaPredicted RBP22.86■■□□□ 1.25
PSPC1-206ENST00000619300 SEC62Q99442 399 aaKnown RBP22.86■■□□□ 1.25
PSPC1-206ENST00000619300 HELLSQ9NRZ9 838 aa22.86■■□□□ 1.25
PSPC1-206ENST00000619300 PDE8BO95263 885 aa22.85■■□□□ 1.25
PSPC1-206ENST00000619300 USPL1Q5W0Q7 1092 aa22.85■■□□□ 1.25
PSPC1-206ENST00000619300 CYP46A1Q9Y6A2 500 aa22.85■■□□□ 1.25
PSPC1-206ENST00000619300 MYH3P11055 1940 aa22.85■■□□□ 1.25
PSPC1-206ENST00000619300 CYP2E1P05181 493 aaPredicted RBP22.84■■□□□ 1.25
PSPC1-206ENST00000619300 AK2P54819 239 aa22.84■■□□□ 1.25
PSPC1-206ENST00000619300 FKBP4Q02790 459 aaKnown RBP eCLIP22.84■■□□□ 1.25
PSPC1-206ENST00000619300 CLEC17AQ6ZS10 378 aa22.84■■□□□ 1.25
PSPC1-206ENST00000619300 RGL2O15211 777 aa22.84■■□□□ 1.25
PSPC1-206ENST00000619300 VPS53Q5VIR6 699 aa22.84■■□□□ 1.25
PSPC1-206ENST00000619300 HMG20BQ9P0W2 317 aa22.84■■□□□ 1.25
PSPC1-206ENST00000619300 LIMCH1Q9UPQ0 1083 aa22.84■■□□□ 1.25
PSPC1-206ENST00000619300 MROH5Q6ZUA9 1318 aa22.84■■□□□ 1.25
PSPC1-206ENST00000619300 CPA1P15085 419 aa22.83■■□□□ 1.25
PSPC1-206ENST00000619300 PSMA5P28066 241 aa22.83■■□□□ 1.25
PSPC1-206ENST00000619300 TSGA10IPQ3SY00 556 aa22.83■■□□□ 1.25
PSPC1-206ENST00000619300 CCDC152Q4G0S7 254 aa22.83■■□□□ 1.25
PSPC1-206ENST00000619300 ZMYM1Q5SVZ6 1142 aa22.83■■□□□ 1.25
PSPC1-206ENST00000619300 CCDC129Q6ZRS4 1044 aa22.83■■□□□ 1.25
PSPC1-206ENST00000619300 RUFY3Q7L099 469 aa22.83■■□□□ 1.25
PSPC1-206ENST00000619300 PDRG1Q9NUG6 133 aa22.83■■□□□ 1.25
PSPC1-206ENST00000619300 TRPC5Q9UL62 973 aaPredicted RBP22.83■■□□□ 1.25
PSPC1-206ENST00000619300 RNF113AO15541 343 aaKnown RBP22.82■■□□□ 1.24
PSPC1-206ENST00000619300 ABCC12Q96J65 1359 aa22.82■■□□□ 1.24
PSPC1-206ENST00000619300 RPS6KA4O75676 772 aa22.82■■□□□ 1.24
PSPC1-206ENST00000619300 LRRFIP1Q32MZ4 808 aaKnown RBP22.82■■□□□ 1.24
PSPC1-206ENST00000619300 U3KPZ7 1027 aaPredicted RBP22.82■■□□□ 1.24
PSPC1-206ENST00000619300 ZNF512BQ96KM6 892 aaPredicted RBP22.81■■□□□ 1.24
PSPC1-206ENST00000619300 CCNL1Q9UK58 526 aaPredicted RBP22.81■■□□□ 1.24
PSPC1-206ENST00000619300 PKP1Q13835 747 aa22.81■■□□□ 1.24
PSPC1-206ENST00000619300 SCARF1Q14162 830 aa22.81■■□□□ 1.24
PSPC1-206ENST00000619300 MPHOSPH8Q99549 860 aa22.81■■□□□ 1.24
PSPC1-206ENST00000619300 SEC31BQ9NQW1 1179 aa22.81■■□□□ 1.24
PSPC1-206ENST00000619300 RTL9Q8NET4 1388 aa22.8■■□□□ 1.24
PSPC1-206ENST00000619300 RPAP1Q9BWH6 1393 aaPredicted RBP22.8■■□□□ 1.24
PSPC1-206ENST00000619300 ATRNO75882 1429 aa22.8■■□□□ 1.24
PSPC1-206ENST00000619300 SEPT12Q8IYM1 358 aa22.8■■□□□ 1.24
PSPC1-206ENST00000619300 SPEF2Q9C093 1822 aa22.8■■□□□ 1.24
PSPC1-206ENST00000619300 ZAP70P43403 619 aa22.79■■□□□ 1.24
PSPC1-206ENST00000619300 PUM3Q15397 648 aaKnown RBP22.79■■□□□ 1.24
PSPC1-206ENST00000619300 SLFNL1Q499Z3 407 aa22.79■■□□□ 1.24
PSPC1-206ENST00000619300 LPIN2Q92539 896 aa22.79■■□□□ 1.24
PSPC1-206ENST00000619300 NHSQ6T4R5 1651 aa22.79■■□□□ 1.24
PSPC1-206ENST00000619300 NARFQ9UHQ1 456 aa22.79■■□□□ 1.24
PSPC1-206ENST00000619300 BTAF1O14981 1849 aa22.78■■□□□ 1.24
PSPC1-206ENST00000619300 TRAK2O60296 914 aa22.78■■□□□ 1.24
PSPC1-206ENST00000619300 ZFYP08048 801 aaPredicted RBP22.78■■□□□ 1.24
PSPC1-206ENST00000619300 FGFR2P21802 821 aa22.78■■□□□ 1.24
PSPC1-206ENST00000619300 KRT32Q14532 448 aa22.78■■□□□ 1.24
PSPC1-206ENST00000619300 HELBQ8NG08 1087 aaPredicted RBP22.78■■□□□ 1.24
PSPC1-206ENST00000619300 ZDHHC9Q9Y397 364 aa22.78■■□□□ 1.24
PSPC1-206ENST00000619300 GNPATO15228 680 aa22.77■■□□□ 1.24
PSPC1-206ENST00000619300 BAG4O95429 457 aaKnown RBP22.77■■□□□ 1.24
PSPC1-206ENST00000619300 PTMSP20962 102 aa22.77■■□□□ 1.24
PSPC1-206ENST00000619300 IGHMBP2P38935 993 aaKnown RBP22.77■■□□□ 1.24
PSPC1-206ENST00000619300 SMIM5Q71RC9 77 aa22.77■■□□□ 1.24
PSPC1-206ENST00000619300 LARP6Q9BRS8 491 aaKnown RBP22.77■■□□□ 1.24
PSPC1-206ENST00000619300 DSCC1Q9BVC3 393 aa22.77■■□□□ 1.24
PSPC1-206ENST00000619300 BCL2L12Q9HB09 334 aa22.77■■□□□ 1.24
PSPC1-206ENST00000619300 TAF6LQ9Y6J9 622 aa22.77■■□□□ 1.24
PSPC1-206ENST00000619300 LRP5O75197 1615 aa22.77■■□□□ 1.24
PSPC1-206ENST00000619300 MCAMP43121 646 aa22.77■■□□□ 1.24
PSPC1-206ENST00000619300 ERFEQ4G0M1 354 aa22.77■■□□□ 1.24
PSPC1-206ENST00000619300 BLOC1S2Q6QNY1 142 aa22.77■■□□□ 1.24
PSPC1-206ENST00000619300 ZSCAN31Q96LW9 406 aaPredicted RBP22.77■■□□□ 1.24
PSPC1-206ENST00000619300 BCORQ6W2J9 1755 aa22.77■■□□□ 1.24
PSPC1-206ENST00000619300 TBC1D9BQ66K14 1250 aa22.76■■□□□ 1.23
PSPC1-206ENST00000619300 ALDH8A1Q9H2A2 487 aaPredicted RBP22.76■■□□□ 1.23
PSPC1-206ENST00000619300 RTCBQ9Y3I0 505 aaKnown RBP22.76■■□□□ 1.23
PSPC1-206ENST00000619300 MAST3O60307 1309 aa22.76■■□□□ 1.23
PSPC1-206ENST00000619300 CCDC102BQ68D86 513 aa22.75■■□□□ 1.23
PSPC1-206ENST00000619300 PI16Q6UXB8 463 aa22.75■■□□□ 1.23
PSPC1-206ENST00000619300 QTRT2Q9H974 415 aaKnown RBP22.75■■□□□ 1.23
PSPC1-206ENST00000619300 ZPR1O75312 459 aa22.75■■□□□ 1.23
PSPC1-206ENST00000619300 RPS6KB1P23443 525 aa22.75■■□□□ 1.23
PSPC1-206ENST00000619300 BICDL1Q6ZP65 573 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms